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FAM196A Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 642938 family with sequence similarity 196, member A chr10 - 128993922 - 128999422 128994422 Transcription Factor Binding Sites   Download all TFBS in the FAM196A promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 128991536 128991544 9.0E-06 GTCATAAAA 9 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 128992528 128992536 2.0E-06 CTAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 128991535 128991544 2.0E-06 GTCATAAAAA 10 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 128991535 128991544 5.0E-06 GTCATAAAAA 10 HOXA10_homeodomain_DBD_monomeric_12_1 SELEX - 128991534 128991545 2.0E-06 GGTCATAAAAAC 12 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 128994703 128994713 1.0E-05 GCCCCGCCCCC 11 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX - 128995451 128995461 8.0E-06 CCTAAATGTCA 11 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 128991835 128991851 1.0E-06 GCAAACAAGAGAATACA 17 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 128991689 128991699 2.0E-06 TACGTAAATAT 11 HOXD11_homeodomain_DBD_monomeric_10_1 SELEX - 128991535 128991544 2.0E-06 GTCATAAAAA 10 HOXC11_homeodomain_full_monomeric_11_1 SELEX - 128991535 128991545 3.0E-06 GGTCATAAAAA 11 SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 128995109 128995121 9.0E-06 ACTCAACAAGTTC 13 OTX2_homeodomain_DBD_dimeric_15_1 SELEX - 128992226 128992240 4.0E-06 CTTTATCCTATTAAG 15 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 128991801 128991816 1.0E-05 TAGTTGTCTCTAAATG 16 Tcfcp2l1_MA0145.1 JASPAR - 128991517 128991530 0.0E+00 CCAGATAAAACCAG 14 Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX - 128991535 128991544 0.0E+00 GTCATAAAAA 10 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 128991536 128991545 3.0E-06 GGTCATAAAA 10 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 128992527 128992536 9.0E-06 TCTAATAAAA 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 128991536 128991544 9.0E-06 GTCATAAAA 9 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 128992528 128992536 7.0E-06 CTAATAAAA 9 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX - 128991535 128991544 9.0E-06 GTCATAAAAA 10 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 128992528 128992537 2.0E-06 CTAATAAAAC 10 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 128992564 128992577 5.0E-06 GTAAGTAGTAAACA 14 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 128991535 128991545 1.0E-06 GGTCATAAAAA 11 SP1_MA0079.2 JASPAR - 128994703 128994712 7.0E-06 CCCCGCCCCC 10 Otx1_homeodomain_DBD_dimeric_15_1 SELEX - 128992226 128992240 4.0E-06 CTTTATCCTATTAAG 15 HOXC11_homeodomain_DBD_monomeric_11_1 SELEX - 128991535 128991545 1.0E-06 GGTCATAAAAA 11 CTCF_C2H2_full_monomeric_17_1 SELEX + 128992551 128992567 7.0E-06 AGTGCCATCTAATGTAA 17 TFCP2_CP2_full_dimer-of-dimers_16_1 SELEX + 128991516 128991531 6.0E-06 ACTGGTTTTATCTGGG 16 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 128992528 128992537 2.0E-06 CTAATAAAAC 10 Hoxa11_homeodomain_DBD_monomeric_12_1 SELEX - 128991534 128991545 5.0E-06 GGTCATAAAAAC 12 HOXC10_homeodomain_DBD_monomeric_10_3 SELEX - 128991535 128991544 1.0E-06 GTCATAAAAA 10 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 128992528 128992537 2.0E-06 CTAATAAAAC 10 Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX - 128991536 128991544 7.0E-06 GTCATAAAA 9 HOXD12_homeodomain_DBD_monomeric_11_1 SELEX - 128991535 128991545 3.0E-06 GGTCATAAAAA 11 TP53_MA0106.1 JASPAR - 128994299 128994318 4.0E-06 CGAGACATGCCCGAGCCAGG 20 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 128992367 128992380 1.0E-05 CATTTAGCTAAAGA 14 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 128991535 128991545 1.0E-06 GGTCATAAAAA 11 HOXC12_homeodomain_DBD_monomeric_11_1 SELEX - 128991535 128991545 3.0E-06 GGTCATAAAAA 11 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 128991536 128991544 6.0E-06 GTCATAAAA 9 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 128992528 128992536 9.0E-06 CTAATAAAA 9 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 128991689 128991699 4.0E-06 TACGTAAATAT 11 CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 128991536 128991544 6.0E-06 GTCATAAAA 9 POU4F1_POU_DBD_monomeric_14_1 SELEX + 128991395 128991408 7.0E-06 CTTCATAAATCATG 14 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 128991535 128991545 1.0E-06 GGTCATAAAAA 11 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 128992528 128992537 2.0E-06 CTAATAAAAC 10 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 128992564 128992577 3.0E-06 GTAAGTAGTAAACA 14 V_FOXP1_01_M00987 TRANSFAC - 128991837 128991856 0.0E+00 ACATTTGTATTCTCTTGTTT 20 V_KLF15_Q2_M01714 TRANSFAC - 128993316 128993329 7.0E-06 GAGTGGGGGAGGAG 14 V_CDX2_Q5_01_M01659 TRANSFAC - 128991482 128991492 1.0E-06 TTCATAAATGT 11 V_CEBP_Q3_M00770 TRANSFAC + 128993835 128993846 8.0E-06 TAGTTTGGAAAA 12 V_BCL6_01_M01183 TRANSFAC + 128992624 128992639 4.0E-06 CTTCCATTTTTTCTTT 16 V_LRH1_Q5_01_M02098 TRANSFAC + 128992332 128992342 9.0E-06 TTTCAAGGACA 11 V_IK_Q5_M01169 TRANSFAC + 128991719 128991728 3.0E-06 TTTGGGAGGT 10 V_CBF_02_M01080 TRANSFAC - 128991698 128991713 6.0E-06 AGCTCTGTGGTCAGAT 16 V_SP1_Q6_01_M00931 TRANSFAC + 128994704 128994713 4.0E-06 GGGGCGGGGC 10 V_CEBP_01_M00159 TRANSFAC + 128993836 128993848 6.0E-06 AGTTTGGAAAATA 13 V_P53_DECAMER_Q2_M00761 TRANSFAC - 128994307 128994316 9.0E-06 AGACATGCCC 10 V_SP1_03_M02281 TRANSFAC - 128994703 128994712 7.0E-06 CCCCGCCCCC 10 V_HOXD13_01_M01404 TRANSFAC + 128992525 128992540 1.0E-06 CCTCTAATAAAACCAT 16 V_LYF1_01_M00141 TRANSFAC + 128991719 128991727 9.0E-06 TTTGGGAGG 9 V_HOXC13_01_M01317 TRANSFAC - 128991533 128991548 2.0E-06 TGAGGTCATAAAAACT 16 V_TAL1_GATA1_01_M02243 TRANSFAC + 128994264 128994281 2.0E-06 CCGCTGCTTACAGATAAG 18 V_WT1_Q6_01_M02036 TRANSFAC - 128994700 128994709 4.0E-06 CGCCCCCGCC 10 V_CP2_02_M00947 TRANSFAC + 128991516 128991530 0.0E+00 ACTGGTTTTATCTGG 15 V_HELIOSA_02_M01004 TRANSFAC + 128992229 128992239 7.0E-06 AATAGGATAAA 11 V_HELIOSA_02_M01004 TRANSFAC + 128992351 128992361 4.0E-06 TTAAGGAAAAG 11 V_RXRA_03_M02791 TRANSFAC + 128991536 128991552 4.0E-06 TTTTATGACCTCACACT 17 V_SOX8_04_M02912 TRANSFAC + 128991482 128991495 2.0E-06 ACATTTATGAAAGA 14 V_POLY_C_M00212 TRANSFAC + 128992529 128992546 2.0E-06 TAATAAAACCATCGTGAG 18 V_NKX61_01_M00424 TRANSFAC + 128992224 128992236 2.0E-06 TTCTTAATAGGAT 13 V_KROX_Q6_M00982 TRANSFAC - 128994698 128994711 0.0E+00 CCCGCCCCCGCCTC 14 V_ZBP89_Q4_M01816 TRANSFAC + 128993317 128993326 2.0E-06 TCCTCCCCCA 10 V_PXRRXR_02_M01153 TRANSFAC + 128991792 128991799 1.0E-05 AGAGTTCA 8 V_HOXD12_01_M01380 TRANSFAC - 128991532 128991548 3.0E-06 TGAGGTCATAAAAACTC 17 V_HOXB9_01_M01426 TRANSFAC - 128991532 128991547 2.0E-06 GAGGTCATAAAAACTC 16 V_CDX2_01_M01449 TRANSFAC - 128991533 128991548 1.0E-06 TGAGGTCATAAAAACT 16 V_MAZ_Q6_01_M02023 TRANSFAC - 128993312 128993325 3.0E-06 GGGGGAGGAGAGGT 14 V_EGR1_Q6_M01873 TRANSFAC + 128994701 128994710 4.0E-06 GCGGGGGCGG 10 V_HOXC11_01_M01329 TRANSFAC - 128991533 128991548 1.0E-06 TGAGGTCATAAAAACT 16 V_HOXD11_01_M01434 TRANSFAC - 128991532 128991548 2.0E-06 TGAGGTCATAAAAACTC 17 V_YY1_Q6_02_M01035 TRANSFAC + 128992623 128992633 7.0E-06 ACTTCCATTTT 11 V_CDX1_01_M01373 TRANSFAC - 128991533 128991548 0.0E+00 TGAGGTCATAAAAACT 16 V_REST_01_M01256 TRANSFAC - 128994351 128994372 3.0E-06 CGGATGCCCTGTCCGGAGTGCT 22 Tal1_Gata1_MA0140.1 JASPAR + 128994264 128994281 2.0E-06 CCGCTGCTTACAGATAAG 18 V_HOXC12_01_M01437 TRANSFAC - 128991532 128991548 1.0E-06 TGAGGTCATAAAAACTC 17 V_MUSCLE_INI_B_M00321 TRANSFAC + 128993647 128993667 7.0E-06 CGCCGACCCCAACCCGCAGCC 21 V_PEBP_Q6_M00984 TRANSFAC + 128991699 128991713 5.0E-06 TCTGACCACAGAGCT 15 V_NKX3A_01_M00451 TRANSFAC - 128993844 128993855 0.0E+00 TTTTAAGTATTT 12 V_HOXA11_01_M01378 TRANSFAC - 128991533 128991548 0.0E+00 TGAGGTCATAAAAACT 16 V_AP1_Q2_01_M00924 TRANSFAC - 128991763 128991774 7.0E-06 TGACTTATGCTT 12 V_SP4_Q5_M01273 TRANSFAC - 128994703 128994713 1.0E-06 GCCCCGCCCCC 11 V_T3R_01_M00239 TRANSFAC - 128991536 128991551 8.0E-06 GTGTGAGGTCATAAAA 16 V_LBP9_01_M01592 TRANSFAC - 128991514 128991530 1.0E-06 CCAGATAAAACCAGTGT 17 V_OSR2_04_M02889 TRANSFAC - 128992561 128992576 7.0E-06 GTTTACTACTTACATT 16 V_LUN1_01_M00480 TRANSFAC + 128994755 128994771 7.0E-06 TCCCAGCTACTCCGCGG 17 V_NKX3A_02_M01383 TRANSFAC + 128993840 128993856 6.0E-06 TGGAAAATACTTAAAAG 17 V_MEIS1_01_M00419 TRANSFAC - 128991671 128991682 6.0E-06 CAGTGACAGGTT 12 V_NKX22_01_M00485 TRANSFAC - 128993844 128993853 2.0E-06 TTAAGTATTT 10 V_RBPJK_01_M01112 TRANSFAC - 128993591 128993601 1.0E-05 GGCGTGGGAAA 11 V_FPM315_01_M01587 TRANSFAC - 128993529 128993540 0.0E+00 GAGGGAGGAGGG 12 V_FPM315_01_M01587 TRANSFAC - 128993977 128993988 7.0E-06 CAGGGAGGAGCG 12 V_FPM315_01_M01587 TRANSFAC + 128994718 128994729 2.0E-06 GAGGGAGCAGGA 12 V_FPM315_01_M01587 TRANSFAC + 128994975 128994986 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 128994978 128994989 3.0E-06 GGAGGAGGAGGA 12 V_ZFP281_01_M01597 TRANSFAC - 128993316 128993326 9.0E-06 TGGGGGAGGAG 11 V_PLAGL1_03_M02786 TRANSFAC + 128994788 128994803 1.0E-06 GCGAGGGCGCCCCAAG 16 V_HOXC10_01_M01361 TRANSFAC - 128991533 128991548 0.0E+00 TGAGGTCATAAAAACT 16 V_PIT1_Q6_M00802 TRANSFAC + 128991394 128991411 1.0E-05 GCTTCATAAATCATGCCA 18 V_SP1_Q2_01_M00933 TRANSFAC - 128994703 128994712 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC + 128994700 128994713 2.0E-06 GGCGGGGGCGGGGC 14 V_SP1_Q4_01_M00932 TRANSFAC + 128994702 128994714 9.0E-06 CGGGGGCGGGGCA 13 V_RNF96_01_M01199 TRANSFAC + 128994199 128994208 7.0E-06 GCCCGCGGCC 10 V_T3RALPHA_Q6_M01724 TRANSFAC + 128993388 128993398 8.0E-06 GCTGAGGTCAC 11 V_HOXC9_01_M01416 TRANSFAC - 128991533 128991548 5.0E-06 TGAGGTCATAAAAACT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.