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C18orf42


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
642597 chromosome 18 open reading frame 42 chr18 -5196755 - 5202255 5197255

Transcription Factor Binding Sites

 
Download all TFBS in the C18orf42 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 5198396 5198413 8.0E-06 AATGCAAATAGTTTTACA 18
SRY_HMG_DBD_dimeric_16_1 SELEX - 5198393 5198408 7.0E-06 AACTATTTGCATTTTC 16
POU2F2_POU_DBD_monomeric_11_1 SELEX + 5198395 5198405 9.0E-06 AAATGCAAATA 11
POU3F3_POU_DBD_monomeric_13_1 SELEX + 5198394 5198406 9.0E-06 AAAATGCAAATAG 13
SP1_MA0079.2 JASPAR - 5195944 5195953 3.0E-06 CCCCTCCCCC 10
SP1_MA0079.2 JASPAR - 5195950 5195959 3.0E-06 CCCCTCCCCC 10
NFKB1_NFAT_DBD_dimeric_13_1 SELEX + 5197284 5197296 7.0E-06 GGGTGAATCCCCG 13
NFKB1_NFAT_DBD_dimeric_13_1 SELEX - 5197284 5197296 4.0E-06 CGGGGATTCACCC 13
POU2F1_POU_DBD_monomeric_12_1 SELEX + 5198394 5198405 4.0E-06 AAAATGCAAATA 12
REST_MA0138.2 JASPAR + 5197178 5197198 0.0E+00 GTCAGCACCCCGGACAGCTCC 21
V_NRSF_Q4_M01028 TRANSFAC - 5197179 5197197 1.0E-06 GAGCTGTCCGGGGTGCTGA 19
V_OCT1_01_M00135 TRANSFAC + 5198391 5198409 3.0E-06 CTGAAAATGCAAATAGTTT 19
V_HNF3_Q6_01_M01012 TRANSFAC - 5198393 5198410 8.0E-06 AAAACTATTTGCATTTTC 18
V_SP1_03_M02281 TRANSFAC - 5195944 5195953 3.0E-06 CCCCTCCCCC 10
V_SP1_03_M02281 TRANSFAC - 5195950 5195959 3.0E-06 CCCCTCCCCC 10
V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 5195936 5195951 5.0E-06 CATTCTGAGGGGGAGG 16
V_NRSE_B_M00325 TRANSFAC + 5197178 5197198 8.0E-06 GTCAGCACCCCGGACAGCTCC 21
V_OCT1_02_M00136 TRANSFAC + 5198391 5198405 8.0E-06 CTGAAAATGCAAATA 15
V_HNF3_Q6_M00791 TRANSFAC + 5198395 5198407 6.0E-06 AAATGCAAATAGT 13
V_HNF3ALPHA_Q6_M00724 TRANSFAC - 5198395 5198405 8.0E-06 TATTTGCATTT 11
V_CDX2_Q5_M00729 TRANSFAC + 5198403 5198416 5.0E-06 ATAGTTTTACAGCT 14
V_REST_01_M01256 TRANSFAC - 5197181 5197202 0.0E+00 GGCGGGAGCTGTCCGGGGTGCT 22
V_OCT1_04_M00138 TRANSFAC + 5198389 5198411 2.0E-06 GACTGAAAATGCAAATAGTTTTA 23
V_GR_Q6_M00192 TRANSFAC - 5198502 5198520 4.0E-06 TAGGCCCCATATGTTCAAG 19
V_AHRARNT_02_M00237 TRANSFAC - 5196327 5196345 6.0E-06 GGCGTGTGCGTGCGTGCGC 19
V_OCAB_Q6_M02113 TRANSFAC + 5198395 5198405 2.0E-06 AAATGCAAATA 11
V_SP3_Q3_M00665 TRANSFAC + 5195934 5195947 5.0E-06 AGCATTCTGAGGGG 14
V_OCT1_B_M00342 TRANSFAC + 5198396 5198405 2.0E-06 AATGCAAATA 10
V_OCT_Q6_M00795 TRANSFAC - 5198396 5198406 7.0E-06 CTATTTGCATT 11
V_POU5F1_01_M01307 TRANSFAC + 5198396 5198405 1.0E-06 AATGCAAATA 10
V_OCT1_Q6_M00195 TRANSFAC + 5198393 5198407 2.0E-06 GAAAATGCAAATAGT 15
V_FPM315_01_M01587 TRANSFAC + 5197272 5197283 6.0E-06 GCGGGAGGAGGA 12
V_FPM315_01_M01587 TRANSFAC + 5197275 5197286 4.0E-06 GGAGGAGGAGGG 12
V_NRSF_01_M00256 TRANSFAC + 5197178 5197198 0.0E+00 GTCAGCACCCCGGACAGCTCC 21
V_REST_02_M02256 TRANSFAC + 5197178 5197198 0.0E+00 GTCAGCACCCCGGACAGCTCC 21
V_ZFP281_01_M01597 TRANSFAC + 5195943 5195953 3.0E-06 AGGGGGAGGGG 11
V_ZFP281_01_M01597 TRANSFAC + 5195949 5195959 3.0E-06 AGGGGGAGGGG 11
V_TITF1_Q3_M00432 TRANSFAC + 5195973 5195982 8.0E-06 TCTCAAGTTT 10
V_ZFP281_04_M02831 TRANSFAC - 5195941 5195955 2.0E-06 TCCCCCTCCCCCTCA 15
V_ZFP281_04_M02831 TRANSFAC - 5195947 5195961 4.0E-06 GTCCCCTCCCCCTCC 15
V_UF1H3BETA_Q6_M01068 TRANSFAC + 5195947 5195960 2.0E-06 GGAGGGGGAGGGGA 14
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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