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LHX5


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSSMotifs
64211 LIM homeobox 5 chr12 -113909377 - 113914877 113909877 V_LHX5_01_M01353

Transcription Factor Binding Sites

 
Download all TFBS in the LHX5 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
RFX4_RFX_DBD_dimeric_16_1 SELEX + 113909760 113909775 4.0E-06 CGTGGCCATGGCAACC 16
RFX4_RFX_DBD_dimeric_16_1 SELEX - 113909760 113909775 3.0E-06 GGTTGCCATGGCCACG 16
NFYA_MA0060.1 JASPAR + 113909742 113909757 8.0E-06 AGCGGCCAATGGGCGC 16
Rfx3_RFX_DBD_dimeric_16_1 SELEX + 113909760 113909775 1.0E-06 CGTGGCCATGGCAACC 16
Rfx3_RFX_DBD_dimeric_16_1 SELEX - 113909760 113909775 1.0E-06 GGTTGCCATGGCCACG 16
XBP1_bZIP_DBD_dimeric_14_1 SELEX - 113909713 113909726 2.0E-06 AGCGCCACGTCACC 14
Creb3l2_bZIP_DBD_dimeric_13_1 SELEX - 113909712 113909724 0.0E+00 CGCCACGTCACCA 13
RFX2_RFX_DBD_dimeric_16_1 SELEX + 113909760 113909775 2.0E-06 CGTGGCCATGGCAACC 16
RFX2_RFX_DBD_dimeric_16_1 SELEX - 113909760 113909775 1.0E-06 GGTTGCCATGGCCACG 16
RFX5_RFX_DBD_dimeric_16_3 SELEX + 113909760 113909775 0.0E+00 CGTGGCCATGGCAACC 16
RFX5_RFX_DBD_dimeric_16_3 SELEX - 113909760 113909775 2.0E-06 GGTTGCCATGGCCACG 16
CREB3L1_bZIP_full_dimeric_14_1 SELEX - 113909712 113909725 0.0E+00 GCGCCACGTCACCA 14
V_HNF3B_01_M00131 TRANSFAC - 113909830 113909844 2.0E-06 TGCCTTGTTTTTTTT 15
V_POU3F3_01_M03090 TRANSFAC - 113909697 113909713 9.0E-06 CAAATCTGAATAAGGAT 17
V_ZFP410_04_M02936 TRANSFAC - 113908832 113908848 7.0E-06 CCTCTCCGCCCCTTCCA 17
V_OCTAMER_01_M01324 TRANSFAC - 113909697 113909713 9.0E-06 CAAATCTGAATAAGGAT 17
V_NKX24_01_M01350 TRANSFAC + 113909770 113909785 6.0E-06 GCAACCTCTTAAATTT 16
V_NKX26_01_M01322 TRANSFAC + 113909770 113909785 5.0E-06 GCAACCTCTTAAATTT 16
V_MEF2_03_M00232 TRANSFAC - 113909775 113909796 6.0E-06 AGATATGCTATAAATTTAAGAG 22
V_PAX8_01_M00717 TRANSFAC - 113908763 113908777 0.0E+00 GATTTTTGCATGAGT 15
V_PAX8_B_M00328 TRANSFAC - 113908761 113908778 1.0E-06 GGATTTTTGCATGAGTTA 18
V_FOXO1_Q5_M01216 TRANSFAC + 113909833 113909841 8.0E-06 AAAAACAAG 9
V_BCL6B_04_M02844 TRANSFAC - 113908832 113908847 6.0E-06 CTCTCCGCCCCTTCCA 16
V_TBP_01_M00471 TRANSFAC - 113909781 113909788 8.0E-06 TATAAATT 8
V_AP3_Q6_M00690 TRANSFAC + 113909794 113909801 5.0E-06 TCTAAATT 8
V_NKX25_03_M01414 TRANSFAC + 113909770 113909785 6.0E-06 GCAACCTCTTAAATTT 16
V_POU5F1_01_M01307 TRANSFAC + 113908766 113908775 4.0E-06 CATGCAAAAA 10
V_XBP1_01_M00251 TRANSFAC + 113909711 113909727 1.0E-05 TTGGTGACGTGGCGCTG 17
V_NFY_01_M00287 TRANSFAC + 113909742 113909757 9.0E-06 AGCGGCCAATGGGCGC 16
V_MEF3_B_M00319 TRANSFAC - 113911812 113911824 7.0E-06 GGGTCAGGTAACA 13
V_FOXO1_01_M00473 TRANSFAC + 113909832 113909841 5.0E-06 AAAAAACAAG 10
V_CP2_01_M00072 TRANSFAC - 113911870 113911880 2.0E-06 GCTCTAACCAG 11
V_NFYA_Q5_M02106 TRANSFAC + 113909744 113909757 7.0E-06 CGGCCAATGGGCGC 14
V_RFX1_02_M00281 TRANSFAC + 113909759 113909776 3.0E-06 CCGTGGCCATGGCAACCT 18
V_NKX21_01_M01312 TRANSFAC + 113909770 113909785 8.0E-06 GCAACCTCTTAAATTT 16
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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