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PDF Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 64146 peptide deformylase (mitochondrial) chr16 - 69363998 - 69369498 69364498 Transcription Factor Binding Sites   Download all TFBS in the PDF promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 69360343 69360360 1.0E-05 GAAGTAAAAATTTAAAAA 18 IRF7_IRF_DBD_dimeric_14_1 SELEX + 69362866 69362879 4.0E-06 CTCAAAGTGAAAGT 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 69361476 69361492 1.0E-05 CATTTAACTGCCATTTA 17 Zfp652_C2H2_DBD_monomeric_13_1 SELEX + 69360426 69360438 7.0E-06 CCTAGGGGTTAAC 13 RARA_nuclearreceptor_full_dimeric_18_1 SELEX + 69360429 69360446 8.0E-06 AGGGGTTAACAAAGGTTA 18 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 69360595 69360611 6.0E-06 ATCATCGATGTTAAACA 17 RFX4_RFX_DBD_dimeric_16_1 SELEX - 69360442 69360457 7.0E-06 CATAGCCATGCTAACC 16 TBX5_TBX_DBD_dimeric_20_1 SELEX + 69361481 69361500 7.0E-06 AACTGCCATTTATAACACTT 20 TBX5_TBX_DBD_dimeric_20_1 SELEX - 69361481 69361500 3.0E-06 AAGTGTTATAAATGGCAGTT 20 FOXL1_forkhead_full_dimeric_13_1 SELEX + 69362978 69362990 1.0E-06 TGTCAATAAACAG 13 SOX9_HMG_full_dimeric_17_3 SELEX - 69361478 69361494 4.0E-06 TATAAATGGCAGTTAAA 17 ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX + 69360430 69360446 5.0E-06 GGGGTTAACAAAGGTTA 17 Mafb_bZIP_DBD_monomeric_12_1 SELEX + 69360608 69360619 3.0E-06 AACATGCTGACA 12 RARG_nuclearreceptor_full_dimeric_17_1 SELEX + 69360430 69360446 5.0E-06 GGGGTTAACAAAGGTTA 17 SOX8_HMG_full_dimeric_17_1 SELEX - 69361478 69361494 5.0E-06 TATAAATGGCAGTTAAA 17 Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX + 69360429 69360446 8.0E-06 AGGGGTTAACAAAGGTTA 18 SOX7_HMG_full_dimeric_17_2 SELEX - 69361478 69361494 3.0E-06 TATAAATGGCAGTTAAA 17 Pax4_MA0068.1 JASPAR - 69360327 69360356 2.0E-06 TAAAAATTTAAAAACTTGTAAGCTCACTAA 30 NR2F1_MA0017.1 JASPAR + 69360545 69360558 0.0E+00 TGAACTTTGGACAG 14 IRF1_MA0050.1 JASPAR + 69362868 69362879 2.0E-06 CAAAGTGAAAGT 12 Sox17_HMG_DBD_dimeric_15_2 SELEX - 69361479 69361493 6.0E-06 ATAAATGGCAGTTAA 15 Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX + 69360430 69360446 2.0E-06 GGGGTTAACAAAGGTTA 17 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 69362979 69362989 1.0E-06 GTCAATAAACA 11 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX + 69360430 69360446 8.0E-06 GGGGTTAACAAAGGTTA 17 FIGLA_bHLH_DBD_dimeric_10_1 SELEX + 69363055 69363064 1.0E-06 ACCACCTGTT 10 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 69360543 69360558 3.0E-06 CTGTCCAAAGTTCAGC 16 TBX4_TBX_DBD_dimeric_20_1 SELEX + 69361481 69361500 3.0E-06 AACTGCCATTTATAACACTT 20 TBX4_TBX_DBD_dimeric_20_1 SELEX - 69361481 69361500 2.0E-06 AAGTGTTATAAATGGCAGTT 20 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 69362979 69362989 1.0E-06 GTCAATAAACA 11 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX - 69360544 69360558 3.0E-06 CTGTCCAAAGTTCAG 15 HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 69361479 69361493 3.0E-06 ATAAATGGCAGTTAA 15 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 69361480 69361492 5.0E-06 TAACTGCCATTTA 13 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 69362867 69362881 0.0E+00 TCAAAGTGAAAGTGT 15 Myf_MA0055.1 JASPAR + 69363184 69363195 5.0E-06 AGGCAACAGCAG 12 HNF4A_MA0114.1 JASPAR - 69360545 69360557 3.0E-06 TGTCCAAAGTTCA 13 TBX20_TBX_DBD_monomeric_15_1 SELEX - 69361490 69361504 7.0E-06 GAAAAAGTGTTATAA 15 Sox3_HMG_DBD_dimeric_17_3 SELEX - 69361478 69361494 6.0E-06 TATAAATGGCAGTTAAA 17 Mafb_bZIP_DBD_dimeric_18_1 SELEX + 69360610 69360627 7.0E-06 CATGCTGACATGTGCAGA 18 FOXO3_forkhead_full_dimeric_14_1 SELEX + 69360605 69360618 8.0E-06 TTAAACATGCTGAC 14 FOXO3_forkhead_full_dimeric_14_1 SELEX - 69360605 69360618 5.0E-06 GTCAGCATGTTTAA 14 MAFK_bZIP_full_monomeric_12_1 SELEX + 69360607 69360618 5.0E-06 AAACATGCTGAC 12 ELF5_MA0136.1 JASPAR - 69363088 69363096 9.0E-06 AACTTCCTT 9 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 69362977 69362989 4.0E-06 TTGTCAATAAACA 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 69362976 69362986 1.0E-05 TTTGTCAATAA 11 NFIA_NFI_full_monomeric_10_1 SELEX - 69364265 69364274 5.0E-06 TGTGCCAAGT 10 E2F1_E2F_DBD_monomeric_14_1 SELEX + 69364319 69364332 1.0E-05 AGGTGGCGCCAATA 14 IRF2_MA0051.1 JASPAR + 69362867 69362884 8.0E-06 TCAAAGTGAAAGTGTTTG 18 V_MEIS1BHOXA9_02_M00421 TRANSFAC + 69360753 69360766 4.0E-06 TGACATGTATATGC 14 V_E2A_Q6_01_M02088 TRANSFAC - 69362996 69363008 6.0E-06 GACCACCTGCAGG 13 V_DBX1_01_M01483 TRANSFAC - 69360340 69360356 5.0E-06 TAAAAATTTAAAAACTT 17 V_APOLYA_B_M00310 TRANSFAC + 69361477 69361491 5.0E-06 ATTTAACTGCCATTT 15 V_MYOD_Q6_M00184 TRANSFAC + 69363055 69363064 7.0E-06 ACCACCTGTT 10 V_FXR_Q3_M00631 TRANSFAC - 69362927 69362940 1.0E-06 GAAGGTGAATGACT 14 V_MAFK_03_M02776 TRANSFAC + 69360606 69360620 1.0E-06 TAAACATGCTGACAT 15 V_YY1_02_M00069 TRANSFAC + 69360587 69360606 7.0E-06 AACCTGCCATCATCGATGTT 20 V_FOXA2_04_M02749 TRANSFAC + 69362974 69362990 5.0E-06 ATTTTGTCAATAAACAG 17 V_MYB_03_M02883 TRANSFAC + 69361476 69361491 6.0E-06 CATTTAACTGCCATTT 16 V_BCL6_01_M01183 TRANSFAC - 69360348 69360363 9.0E-06 CTAGAAGTAAAAATTT 16 V_MAFB_05_M02775 TRANSFAC + 69360607 69360623 3.0E-06 AAACATGCTGACATGTG 17 V_SP1_Q6_01_M00931 TRANSFAC - 69364409 69364418 4.0E-06 GGGGCGGGGC 10 V_EOMES_03_M02747 TRANSFAC - 69361488 69361504 9.0E-06 GAAAAAGTGTTATAAAT 17 V_DR4_Q2_M00965 TRANSFAC - 69360430 69360446 3.0E-06 TAACCTTTGTTAACCCC 17 V_IRF2_Q6_M01882 TRANSFAC + 69362866 69362881 6.0E-06 CTCAAAGTGAAAGTGT 16 V_HNF4ALPHA_Q6_M00638 TRANSFAC + 69360544 69360556 2.0E-06 CTGAACTTTGGAC 13 V_HNF4A_03_M02220 TRANSFAC - 69360545 69360557 3.0E-06 TGTCCAAAGTTCA 13 V_PPAR_DR1_Q2_M00763 TRANSFAC + 69360545 69360557 1.0E-05 TGAACTTTGGACA 13 V_CETS1P54_02_M00074 TRANSFAC + 69363085 69363097 5.0E-06 GCAAAGGAAGTTA 13 V_MYF_01_M01302 TRANSFAC + 69363184 69363195 5.0E-06 AGGCAACAGCAG 12 V_COUP_01_M00158 TRANSFAC + 69360545 69360558 0.0E+00 TGAACTTTGGACAG 14 V_STAF_01_M00262 TRANSFAC - 69364517 69364538 3.0E-06 GCTTCCCGGCGTGCCCCGCGCT 22 V_XFD3_01_M00269 TRANSFAC + 69362976 69362989 2.0E-06 TTTGTCAATAAACA 14 V_SP4_03_M02810 TRANSFAC + 69364603 69364619 3.0E-06 AGCACCGCCCCCTTCCG 17 V_IRF3_Q3_M01279 TRANSFAC - 69362869 69362881 8.0E-06 ACACTTTCACTTT 13 V_RXRA_04_M02895 TRANSFAC + 69360435 69360450 7.0E-06 TAACAAAGGTTAGCAT 16 V_HNF1_Q6_01_M01011 TRANSFAC - 69360341 69360361 3.0E-06 AGAAGTAAAAATTTAAAAACT 21 V_EGR1_04_M02848 TRANSFAC + 69363104 69363119 9.0E-06 TGGTGAGTGGGAACAG 16 V_REST_01_M01256 TRANSFAC - 69360545 69360566 7.0E-06 TGAGGCCACTGTCCAAAGTTCA 22 V_OCT1_04_M00138 TRANSFAC + 69360336 69360358 1.0E-05 TTACAAGTTTTTAAATTTTTACT 23 V_OCT1_04_M00138 TRANSFAC - 69360337 69360359 3.0E-06 AAGTAAAAATTTAAAAACTTGTA 23 V_SP1SP3_Q4_M01219 TRANSFAC + 69364607 69364617 4.0E-06 CCGCCCCCTTC 11 V_WHN_B_M00332 TRANSFAC - 69364894 69364904 7.0E-06 AGAGACGCTTT 11 V_XFD2_01_M00268 TRANSFAC + 69362980 69362993 5.0E-06 TCAATAAACAGGCA 14 V_NCX_02_M01420 TRANSFAC - 69360340 69360356 0.0E+00 TAAAAATTTAAAAACTT 17 V_HNF4A_Q6_01_M02016 TRANSFAC - 69360542 69360556 1.0E-06 GTCCAAAGTTCAGCG 15 V_LMO2COM_01_M00277 TRANSFAC - 69364105 69364116 1.0E-06 CGGCAGGTGCTG 12 V_ICSBP_Q6_M00699 TRANSFAC + 69362869 69362880 0.0E+00 AAAGTGAAAGTG 12 V_FOXO1_Q5_M01216 TRANSFAC - 69363428 69363436 8.0E-06 AAAAACAAG 9 V_SOX17_04_M02904 TRANSFAC - 69360369 69360385 9.0E-06 GTTCTGATTCAAGTAAA 17 V_SOX17_04_M02904 TRANSFAC + 69362931 69362947 4.0E-06 ATTCACCTTCATCCAAT 17 V_HBP1_04_M02866 TRANSFAC + 69363168 69363184 2.0E-06 TGTTCCCATTGACAAGA 17 V_MYOD_01_M00001 TRANSFAC - 69363054 69363065 0.0E+00 GAACAGGTGGTG 12 V_MYOD_Q6_01_M00929 TRANSFAC - 69364102 69364119 6.0E-06 CCGCGGCAGGTGCTGGCG 18 V_HNF1_01_M00132 TRANSFAC - 69360344 69360358 8.0E-06 AGTAAAAATTTAAAA 15 V_TAL1ALPHAE47_01_M00066 TRANSFAC - 69363052 69363067 7.0E-06 GAGAACAGGTGGTGTG 16 V_FOXL1_04_M02753 TRANSFAC + 69362974 69362990 4.0E-06 ATTTTGTCAATAAACAG 17 V_HNF4_Q6_01_M01031 TRANSFAC - 69360544 69360557 1.0E-06 TGTCCAAAGTTCAG 14 V_MYB_Q3_M00773 TRANSFAC - 69361480 69361490 9.0E-06 AATGGCAGTTA 11 V_PLZF_02_M01075 TRANSFAC - 69360340 69360368 9.0E-06 TGTAACTAGAAGTAAAAATTTAAAAACTT 29 V_IRF1_Q6_01_M01881 TRANSFAC - 69362867 69362880 1.0E-06 CACTTTCACTTTGA 14 V_MYF6_03_M02781 TRANSFAC - 69363053 69363068 8.0E-06 GGAGAACAGGTGGTGT 16 V_SOX4_01_M01308 TRANSFAC + 69360436 69360443 1.0E-05 AACAAAGG 8 V_YY1_01_M00059 TRANSFAC + 69362967 69362983 6.0E-06 GCTGTCCATTTTGTCAA 17 V_SOX15_04_M02903 TRANSFAC - 69360359 69360373 1.0E-05 GTAAATGTAACTAGA 15 V_ELF5_04_M02241 TRANSFAC - 69363088 69363096 9.0E-06 AACTTCCTT 9 V_CDPCR3_01_M00105 TRANSFAC - 69362944 69362958 3.0E-06 CACAAACGTCTATTG 15 V_FOXK1_03_M02752 TRANSFAC + 69362974 69362990 8.0E-06 ATTTTGTCAATAAACAG 17 V_NR2F2_04_M02887 TRANSFAC - 69364487 69364502 3.0E-06 CGGGCCGGGTCACTGT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.