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IFIH1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 64135 interferon induced with helicase C domain 1 chr2 - 163174718 - 163180218 163175218 Transcription Factor Binding Sites   Download all TFBS in the IFIH1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 163172726 163172738 4.0E-06 CCAAACATAAACA 13 Foxa2_MA0047.2 JASPAR - 163172672 163172683 9.0E-06 TATTTACTCTAA 12 NF-kappaB_MA0061.1 JASPAR + 163175490 163175499 3.0E-06 GGGACTTTCC 10 SOX21_HMG_DBD_dimeric_13_2 SELEX - 163173799 163173811 8.0E-06 AGAATGGTCTTCA 13 FOXF2_MA0030.1 JASPAR + 163172727 163172740 6.0E-06 CAAACATAAACAGC 14 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 163174374 163174390 7.0E-06 GTCTTCAATTGTCAACA 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 163175750 163175766 6.0E-06 GTGAGTAACAATAAACA 17 SRY_HMG_DBD_dimeric_13_2 SELEX + 163173799 163173811 2.0E-06 TGAAGACCATTCT 13 IRF8_IRF_full_dimeric_14_1 SELEX - 163175204 163175217 1.0E-06 TCGAAACAGAAACC 14 FOXL1_forkhead_full_dimeric_13_1 SELEX + 163175755 163175767 8.0E-06 TAACAATAAACAG 13 SOX15_HMG_full_dimeric_15_3 SELEX + 163173798 163173812 2.0E-06 CTGAAGACCATTCTT 15 SPIB_ETS_DBD_monomeric_14_1 SELEX + 163175498 163175511 5.0E-06 CCAAAGGGGAAGTG 14 Foxq1_MA0040.1 JASPAR - 163172939 163172949 2.0E-06 TAATGTTTATG 11 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 163175753 163175766 3.0E-06 AGTAACAATAAACA 14 RELA_MA0107.1 JASPAR + 163175261 163175270 5.0E-06 GGGAGTTTCC 10 RELA_MA0107.1 JASPAR + 163175490 163175499 6.0E-06 GGGACTTTCC 10 FOXI1_MA0042.1 JASPAR - 163172938 163172949 1.0E-05 TAATGTTTATGT 12 CTCF_C2H2_full_monomeric_17_1 SELEX + 163175278 163175294 2.0E-06 GACGCCACCTTTTGGTC 17 SOX14_HMG_DBD_dimeric_15_1 SELEX + 163173798 163173812 4.0E-06 CTGAAGACCATTCTT 15 Foxd3_MA0041.1 JASPAR - 163172938 163172949 8.0E-06 TAATGTTTATGT 12 IRF9_IRF_full_trimeric_15_1 SELEX - 163175204 163175218 0.0E+00 ATCGAAACAGAAACC 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 163175343 163175357 9.0E-06 AGAAAAGGAAAGCGA 15 FOXI1_forkhead_full_dimeric_17_1 SELEX + 163172668 163172684 5.0E-06 GTATTTAGAGTAAATAG 17 TEAD1_TEA_full_dimeric_17_1 SELEX + 163172552 163172568 6.0E-06 AAATCCCTTGCATTACT 17 IRF4_IRF_full_dimeric_15_1 SELEX - 163175203 163175217 0.0E+00 TCGAAACAGAAACCA 15 Sox3_HMG_DBD_dimeric_17_3 SELEX - 163173797 163173813 6.0E-06 TAAGAATGGTCTTCAGA 17 ETS1_ETS_full_dimeric_18_1 SELEX + 163175659 163175676 3.0E-06 GGAGGAAGTCCTTCCTAA 18 SPI1_ETS_full_monomeric_14_1 SELEX + 163175498 163175511 6.0E-06 CCAAAGGGGAAGTG 14 IRF3_IRF_full_trimeric_21_1 SELEX - 163175203 163175223 0.0E+00 AGAGAATCGAAACAGAAACCA 21 IRF3_IRF_full_trimeric_21_1 SELEX + 163175336 163175356 1.0E-06 GGGAAACAGAAAAGGAAAGCG 21 IRF3_IRF_full_trimeric_21_1 SELEX + 163175342 163175362 1.0E-06 CAGAAAAGGAAAGCGAATTCT 21 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 163175754 163175766 6.0E-06 GTAACAATAAACA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 163172726 163172738 1.0E-06 CCAAACATAAACA 13 Sox1_HMG_DBD_dimeric_15_2 SELEX + 163173798 163173812 7.0E-06 CTGAAGACCATTCTT 15 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 163175753 163175766 4.0E-06 AGTAACAATAAACA 14 V_FOXP1_01_M00987 TRANSFAC - 163172716 163172735 7.0E-06 TTATGTTTGGTGGGTATGAT 20 V_FOXP1_01_M00987 TRANSFAC - 163172928 163172947 0.0E+00 ATGTTTATGTCGTTTTGTGT 20 V_NFKAPPAB65_01_M00052 TRANSFAC + 163175261 163175270 7.0E-06 GGGAGTTTCC 10 V_NFKAPPAB65_01_M00052 TRANSFAC + 163175490 163175499 7.0E-06 GGGACTTTCC 10 V_OSR1_03_M02784 TRANSFAC + 163173829 163173844 7.0E-06 AAAAACAGTAGCAGGC 16 V_NFKB_C_M00208 TRANSFAC + 163175489 163175500 0.0E+00 TGGGACTTTCCA 12 V_FREAC7_01_M00293 TRANSFAC + 163172935 163172950 2.0E-06 ACGACATAAACATTAC 16 V_FREAC7_01_M00293 TRANSFAC + 163175755 163175770 1.0E-05 TAACAATAAACAGTTA 16 V_GAF_Q6_M01209 TRANSFAC - 163175722 163175732 9.0E-06 CAAATTCCCAG 11 V_NFKB_Q6_01_M00774 TRANSFAC - 163175489 163175504 1.0E-06 CCTTTGGAAAGTCCCA 16 V_OSF2_Q6_M00731 TRANSFAC - 163172741 163172748 1.0E-05 ACCACAAA 8 V_AHRARNT_01_M00235 TRANSFAC + 163174882 163174897 6.0E-06 TGAAATGTGCGTGCCG 16 V_NF1_Q6_01_M00806 TRANSFAC + 163175864 163175880 4.0E-06 TTAGAAGGAAGCCAAGA 17 V_FOXD3_01_M00130 TRANSFAC - 163172938 163172949 5.0E-06 TAATGTTTATGT 12 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 163174380 163174391 1.0E-06 AATTGTCAACAG 12 V_GM397_03_M02760 TRANSFAC - 163172865 163172881 4.0E-06 CAAATGTGTACATCACT 17 V_GM397_03_M02760 TRANSFAC + 163172866 163172882 8.0E-06 GTGATGTACACATTTGT 17 V_ETS_B_M00340 TRANSFAC + 163175658 163175671 4.0E-06 AGGAGGAAGTCCTT 14 V_FOXO4_02_M00476 TRANSFAC + 163175408 163175421 1.0E-05 ATTTTGTTTTCCCA 14 V_MMEF2_Q6_M00405 TRANSFAC + 163175669 163175684 4.0E-06 CTTCCTAAAATAAACC 16 V_HOXA13_02_M01297 TRANSFAC + 163175676 163175684 3.0E-06 AAATAAACC 9 V_SOX5_01_M00042 TRANSFAC + 163175434 163175443 1.0E-06 TTAACAATAA 10 V_ZTA_Q2_M00711 TRANSFAC - 163175751 163175763 5.0E-06 TTATTGTTACTCA 13 V_IRF_Q6_01_M00972 TRANSFAC + 163175338 163175348 6.0E-06 GAAACAGAAAA 11 V_SRY_02_M00160 TRANSFAC - 163175407 163175418 6.0E-06 GAAAACAAAATA 12 V_SRY_02_M00160 TRANSFAC + 163175433 163175444 3.0E-06 CTTAACAATAAG 12 V_IRF3_05_M02767 TRANSFAC - 163175209 163175222 1.0E-06 GAGAATCGAAACAG 14 V_TR4_Q2_M01725 TRANSFAC - 163174706 163174716 1.0E-06 CCTGACCTTTC 11 V_PU1_Q4_M01172 TRANSFAC - 163175499 163175517 1.0E-06 TCTGTTCACTTCCCCTTTG 19 V_CDX_Q5_M00991 TRANSFAC + 163172927 163172944 2.0E-06 TACACAAAACGACATAAA 18 V_HNF1_C_M00206 TRANSFAC - 163172603 163172619 1.0E-05 AGCTAGATTTTATCCAA 17 V_RPC155_01_M01798 TRANSFAC - 163175842 163175857 3.0E-06 TTGGTGGTTCAAGTCC 16 V_TAL1_Q6_M00993 TRANSFAC - 163174852 163174861 7.0E-06 ACCATCTGCT 10 V_SOX13_03_M02797 TRANSFAC + 163175751 163175766 2.0E-06 TGAGTAACAATAAACA 16 V_SOX7_03_M02807 TRANSFAC + 163175749 163175770 1.0E-06 AGTGAGTAACAATAAACAGTTA 22 V_SPI1_03_M02078 TRANSFAC + 163175502 163175511 1.0E-05 AGGGGAAGTG 10 V_TEF_Q6_M00672 TRANSFAC + 163175234 163175245 8.0E-06 TTGTAAACGTAA 12 V_NFKB_Q6_M00194 TRANSFAC + 163175488 163175501 1.0E-06 TTGGGACTTTCCAA 14 V_IRF_Q6_M00772 TRANSFAC + 163175201 163175215 1.0E-06 TTTGGTTTCTGTTTC 15 V_IRF_Q6_M00772 TRANSFAC - 163175338 163175352 4.0E-06 TTCCTTTTCTGTTTC 15 V_IRF_Q6_M00772 TRANSFAC - 163175344 163175358 1.0E-06 TTCGCTTTCCTTTTC 15 V_HMX1_01_M00433 TRANSFAC + 163174512 163174521 5.0E-06 CAAGTCCGTG 10 V_ISRE_01_M00258 TRANSFAC + 163175203 163175217 4.0E-06 TGGTTTCTGTTTCGA 15 V_USF_02_M00122 TRANSFAC + 163175476 163175489 6.0E-06 AAAGCATGTGATTT 14 V_USF_02_M00122 TRANSFAC - 163175476 163175489 6.0E-06 AAATCACATGCTTT 14 V_IRF4_03_M02768 TRANSFAC - 163175207 163175221 3.0E-06 AGAATCGAAACAGAA 15 V_HFH1_01_M00129 TRANSFAC - 163172938 163172949 0.0E+00 TAATGTTTATGT 12 V_ISGF3G_03_M02771 TRANSFAC - 163175202 163175216 9.0E-06 CGAAACAGAAACCAA 15 V_ISGF3G_03_M02771 TRANSFAC - 163175208 163175222 2.0E-06 GAGAATCGAAACAGA 15 V_STAT3_03_M01595 TRANSFAC - 163175411 163175426 5.0E-06 CCTGCTGGGAAAACAA 16 V_LHX3b_01_M01971 TRANSFAC + 163172964 163172973 5.0E-06 AAGTAATTTA 10 V_NR1B1_Q6_M02110 TRANSFAC + 163174707 163174716 9.0E-06 AAAGGTCAGG 10 V_ICSBP_Q6_M00699 TRANSFAC - 163175203 163175214 5.0E-06 AAACAGAAACCA 12 V_ICSBP_Q6_M00699 TRANSFAC + 163175511 163175522 2.0E-06 GAACAGAAACTG 12 V_FOXO1_Q5_M01216 TRANSFAC - 163175410 163175418 5.0E-06 GAAAACAAA 9 V_HOXA7_02_M01336 TRANSFAC - 163172961 163172977 5.0E-06 CAAGTAAATTACTTTGC 17 V_SOX15_03_M02799 TRANSFAC + 163175751 163175767 3.0E-06 TGAGTAACAATAAACAG 17 V_TAL1_01_M01591 TRANSFAC - 163175341 163175353 1.0E-06 TTTCCTTTTCTGT 13 V_HOXB8_01_M01451 TRANSFAC + 163175753 163175768 9.0E-06 AGTAACAATAAACAGT 16 V_AREB6_02_M00413 TRANSFAC - 163174875 163174886 1.0E-06 TTTCACCTGTCC 12 V_AREB6_02_M00413 TRANSFAC - 163175604 163175615 5.0E-06 TCTCACCTGTCC 12 V_OSR2_03_M02785 TRANSFAC + 163173829 163173844 8.0E-06 AAAAACAGTAGCAGGC 16 V_FOXA2_03_M02260 TRANSFAC - 163172672 163172683 9.0E-06 TATTTACTCTAA 12 V_ETS1_B_M00339 TRANSFAC + 163175659 163175673 7.0E-06 GGAGGAAGTCCTTCC 15 V_IRF1_Q6_01_M01881 TRANSFAC + 163175203 163175216 7.0E-06 TGGTTTCTGTTTCG 14 V_IRF1_Q6_01_M01881 TRANSFAC - 163175337 163175350 8.0E-06 CCTTTTCTGTTTCC 14 V_SOX8_03_M02808 TRANSFAC - 163175751 163175767 4.0E-06 CTGTTTATTGTTACTCA 17 V_NFKAPPAB_01_M00054 TRANSFAC + 163175490 163175499 3.0E-06 GGGACTTTCC 10 V_SOX14_04_M02901 TRANSFAC - 163172717 163172733 5.0E-06 ATGTTTGGTGGGTATGA 17 V_NUR77_Q5_M01217 TRANSFAC - 163174706 163174715 7.0E-06 CTGACCTTTC 10 V_FOXJ2_01_M00422 TRANSFAC + 163172934 163172951 4.0E-06 AACGACATAAACATTACA 18 V_FOXJ2_01_M00422 TRANSFAC + 163175754 163175771 1.0E-06 GTAACAATAAACAGTTAA 18 V_VDR_Q3_M00444 TRANSFAC + 163172675 163172689 1.0E-06 GAGTAAATAGGGAGA 15 V_SOX2_Q6_M01272 TRANSFAC - 163172638 163172653 3.0E-06 ATCACTTTTGTCTTGC 16 V_DMRT5_01_M01150 TRANSFAC + 163175201 163175215 4.0E-06 TTTGGTTTCTGTTTC 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.