Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SMOC2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 64094 SPARC related modular calcium binding 2 chr6 + 168836830 - 168842330 168841830 Transcription Factor Binding Sites   Download all TFBS in the SMOC2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FEV_MA0156.1 JASPAR - 168840991 168840998 1.0E-05 CAGGAAAT 8 Sox11_HMG_DBD_dimeric_15_1 SELEX + 168840987 168841001 7.0E-06 AAAAATTTCCTGGTT 15 V_ELF5_02_M01980 TRANSFAC - 168840990 168840999 7.0E-06 CCAGGAAATT 10 V_MAFB_03_M02879 TRANSFAC + 168840980 168840994 5.0E-06 GGTGTGCAAAAATTT 15 V_EAR2_Q2_M01728 TRANSFAC + 168844120 168844133 5.0E-06 TGGGCTTTGCCCTG 14 V_HNF4_01_B_M00411 TRANSFAC - 168844119 168844133 8.0E-06 CAGGGCAAAGCCCAC 15 V_GR_01_M00955 TRANSFAC - 168844144 168844170 2.0E-06 AAATTTCAGGCAAACTGTTCTTGGGGA 27 V_GR_Q6_02_M01836 TRANSFAC - 168844148 168844160 1.0E-06 CAAACTGTTCTTG 13 V_ELF1_Q6_M00746 TRANSFAC - 168840991 168841002 9.0E-06 AAACCAGGAAAT 12 V_ETS1_B_M00339 TRANSFAC - 168840985 168840999 9.0E-06 CCAGGAAATTTTTGC 15 V_FEV_01_M02269 TRANSFAC - 168840991 168840998 1.0E-05 CAGGAAAT 8

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.