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TNN Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 63923 tenascin N chr1 + 175031993 - 175037493 175036993 Transcription Factor Binding Sites   Download all TFBS in the TNN promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Sox17_MA0078.1 JASPAR - 175041448 175041456 7.0E-06 ATCATTGTC 9 EWSR1-FLI1_MA0149.1 JASPAR - 175041373 175041390 5.0E-06 GGAAGGTGGGAGGGAGGG 18 PDX1_homeodomain_DBD_monomeric_8_1 SELEX + 175041903 175041910 5.0E-06 GTAATTAA 8 Pax4_MA0068.1 JASPAR + 175041559 175041588 4.0E-06 GGAAAATACCCCTCAGCAGAATAATCCTCC 30 HOXA1_homeodomain_DBD_monomeric_10_1 SELEX + 175041902 175041911 6.0E-06 AGTAATTAAT 10 HOXB5_homeodomain_DBD_monomeric_10_1 SELEX + 175041902 175041911 2.0E-06 AGTAATTAAT 10 Dlx2_homeodomain_DBD_monomeric_8_1 SELEX + 175041903 175041910 5.0E-06 GTAATTAA 8 NFATC1_NFAT_full_dimeric_14_1 SELEX + 175041550 175041563 0.0E+00 CTTTCCATGGGAAA 14 NFATC1_NFAT_full_dimeric_14_1 SELEX - 175041550 175041563 0.0E+00 TTTCCCATGGAAAG 14 Hoxa2_homeodomain_DBD_monomeric_10_1 SELEX + 175041902 175041911 3.0E-06 AGTAATTAAT 10 HOXB2_homeodomain_DBD_monomeric_10_1 SELEX + 175041902 175041911 2.0E-06 AGTAATTAAT 10 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX + 175041902 175041911 1.0E-06 AGTAATTAAT 10 BCL6B_C2H2_DBD_monomeric_17_1 SELEX + 175041841 175041857 9.0E-06 TTCTTTCGAACAATCAA 17 VAX1_homeodomain_DBD_monomeric_8_1 SELEX - 175041903 175041910 9.0E-06 TTAATTAC 8 GSX2_homeodomain_DBD_monomeric_10_1 SELEX + 175041902 175041911 8.0E-06 AGTAATTAAT 10 Hoxd3_homeodomain_DBD_monomeric_10_1 SELEX + 175041902 175041911 0.0E+00 AGTAATTAAT 10 HOXB3_homeodomain_DBD_monomeric_10_1 SELEX + 175041902 175041911 2.0E-06 AGTAATTAAT 10 FEV_MA0156.1 JASPAR - 175041496 175041503 1.0E-05 CAGGAAAT 8 VAX2_homeodomain_DBD_monomeric_8_1 SELEX - 175041903 175041910 5.0E-06 TTAATTAC 8 Rhox11_homeodomain_DBD_monomeric_9_1 SELEX + 175041724 175041732 2.0E-06 TGCTGTTAA 9 MEOX1_homeodomain_full_monomeric_10_1 SELEX + 175041902 175041911 7.0E-06 AGTAATTAAT 10 GSX1_homeodomain_DBD_monomeric_10_1 SELEX + 175041902 175041911 8.0E-06 AGTAATTAAT 10 RUNX1_MA0002.2 JASPAR + 175041671 175041681 2.0E-06 GCCTGTGGTTT 11 MNX1_homeodomain_DBD_monomeric_10_1 SELEX + 175041902 175041911 3.0E-06 AGTAATTAAT 10 BATF3_bZIP_DBD_dimeric_14_1 SELEX + 175041702 175041715 3.0E-06 CGATGAAGTCATCC 14 BATF3_bZIP_DBD_dimeric_14_1 SELEX - 175041702 175041715 8.0E-06 GGATGACTTCATCG 14 RREB1_MA0073.1 JASPAR + 175041388 175041407 4.0E-06 TCCCACACCACCCAACACCC 20 Meox2_homeodomain_DBD_monomeric_8_1 SELEX - 175041903 175041910 9.0E-06 TTAATTAC 8 V_SRF_Q6_M00186 TRANSFAC - 175041585 175041598 3.0E-06 TTCCAAATAGGGAG 14 V_TST1_02_M01316 TRANSFAC - 175041900 175041916 3.0E-06 TCCTCATTAATTACTGC 17 V_TST1_02_M01316 TRANSFAC + 175041901 175041917 2.0E-06 CAGTAATTAATGAGGAC 17 V_AML_Q6_M00769 TRANSFAC + 175041669 175041683 1.0E-06 CAGCCTGTGGTTTGC 15 V_RHOX11_01_M01347 TRANSFAC + 175041720 175041736 8.0E-06 CTTCTGCTGTTAAACAA 17 V_DMRT3_01_M01148 TRANSFAC - 175041596 175041610 7.0E-06 AGGATGATACATTTC 15 V_DMRT3_01_M01148 TRANSFAC + 175041918 175041932 7.0E-06 ATCTTGTTACAAATC 15 V_SIX6_02_M01398 TRANSFAC - 175040227 175040243 7.0E-06 AAAAGTGTATCATCATG 17 V_ETS_B_M00340 TRANSFAC - 175041492 175041505 2.0E-06 TGCAGGAAATGTGT 14 V_SATB1_Q3_M01723 TRANSFAC + 175041419 175041434 8.0E-06 AGAATTAAAGACATGA 16 V_NFAT3_Q3_M01734 TRANSFAC - 175041865 175041874 3.0E-06 AGATTTTCCT 10 V_CEBP_01_M00159 TRANSFAC + 175041590 175041602 1.0E-06 TATTTGGAAATGT 13 V_P50P50_Q3_M01223 TRANSFAC - 175041819 175041831 1.0E-05 AAGGGAAATCCTC 13 V_ATF3_Q6_01_M01863 TRANSFAC + 175041704 175041714 9.0E-06 ATGAAGTCATC 11 V_HOXC4_01_M01369 TRANSFAC - 175041898 175041914 6.0E-06 CTCATTAATTACTGCCT 17 V_NKX61_03_M01489 TRANSFAC - 175041899 175041915 3.0E-06 CCTCATTAATTACTGCC 17 V_HOXC6_01_M01406 TRANSFAC - 175041898 175041914 8.0E-06 CTCATTAATTACTGCCT 17 V_HOXC6_01_M01406 TRANSFAC + 175041899 175041915 6.0E-06 GGCAGTAATTAATGAGG 17 V_PITX2_Q6_M02114 TRANSFAC + 175036942 175036951 5.0E-06 TTTAAACCCA 10 V_OCTAMER_02_M01477 TRANSFAC + 175041902 175041918 4.0E-06 AGTAATTAATGAGGACA 17 V_VAX2_01_M01327 TRANSFAC - 175041900 175041915 5.0E-06 CCTCATTAATTACTGC 16 V_LHX3A_01_M00510 TRANSFAC - 175041903 175041912 1.0E-05 CATTAATTAC 10 V_K2B_01_M01348 TRANSFAC - 175041898 175041914 9.0E-06 CTCATTAATTACTGCCT 17 V_PAX6_02_M01391 TRANSFAC - 175041898 175041913 7.0E-06 TCATTAATTACTGCCT 16 V_DLX5_01_M01388 TRANSFAC + 175041900 175041915 4.0E-06 GCAGTAATTAATGAGG 16 V_RHOX11_02_M01384 TRANSFAC + 175041720 175041736 3.0E-06 CTTCTGCTGTTAAACAA 17 V_RPC155_01_M01798 TRANSFAC - 175036939 175036954 1.0E-06 TCCTGGGTTTAAATCC 16 V_SRF_C_M00215 TRANSFAC + 175041586 175041600 7.0E-06 TCCCTATTTGGAAAT 15 V_ELF4_04_M02850 TRANSFAC + 175041992 175042008 1.0E-06 GCTACAAAAACAAATGC 2 V_EN1_02_M01365 TRANSFAC + 175041898 175041913 4.0E-06 AGGCAGTAATTAATGA 16 V_DBX2_01_M01360 TRANSFAC + 175041902 175041917 4.0E-06 AGTAATTAATGAGGAC 16 V_RUNX1_01_M02257 TRANSFAC + 175041671 175041681 2.0E-06 GCCTGTGGTTT 11 V_SIX1_01_M01313 TRANSFAC - 175040227 175040243 7.0E-06 AAAAGTGTATCATCATG 17 V_HOXA3_02_M01337 TRANSFAC + 175041898 175041911 3.0E-06 AGGCAGTAATTAAT 14 V_SIX3_01_M01358 TRANSFAC - 175040227 175040243 1.0E-06 AAAAGTGTATCATCATG 17 V_MAZ_Q6_01_M02023 TRANSFAC - 175041372 175041385 1.0E-06 GTGGGAGGGAGGGA 14 V_MAZ_Q6_01_M02023 TRANSFAC - 175041647 175041660 1.0E-06 GAGGGTGGGGAGGG 14 V_PMX2A_01_M01444 TRANSFAC - 175041900 175041915 5.0E-06 CCTCATTAATTACTGC 16 V_PBX1_01_M00096 TRANSFAC + 175041849 175041857 7.0E-06 AACAATCAA 9 V_OCT1_08_M01354 TRANSFAC - 175041904 175041919 8.0E-06 ATGTCCTCATTAATTA 16 V_PIT1_01_M01465 TRANSFAC - 175041900 175041916 4.0E-06 TCCTCATTAATTACTGC 17 V_PIT1_01_M01465 TRANSFAC + 175041901 175041917 1.0E-06 CAGTAATTAATGAGGAC 17 V_HMX1_02_M01481 TRANSFAC + 175041899 175041915 5.0E-06 GGCAGTAATTAATGAGG 17 V_MUSCLE_INI_B_M00321 TRANSFAC + 175041387 175041407 2.0E-06 TTCCCACACCACCCAACACCC 21 V_HB24_01_M01399 TRANSFAC - 175041902 175041916 2.0E-06 TCCTCATTAATTACT 15 V_SRF_Q5_02_M01007 TRANSFAC + 175041582 175041600 5.0E-06 ATCCTCCCTATTTGGAAAT 19 V_NKX63_01_M01470 TRANSFAC - 175041899 175041915 4.0E-06 CCTCATTAATTACTGCC 17 V_SIX2_01_M01433 TRANSFAC - 175040227 175040243 6.0E-06 AAAAGTGTATCATCATG 17 V_HOXB4_01_M01424 TRANSFAC - 175041898 175041914 7.0E-06 CTCATTAATTACTGCCT 17 V_ZFP691_04_M02937 TRANSFAC - 175041731 175041747 4.0E-06 AAAGAGACTCCTTGTTT 17 V_DLX7_01_M01486 TRANSFAC - 175041899 175041915 7.0E-06 CCTCATTAATTACTGCC 17 V_HOXB7_01_M01396 TRANSFAC - 175041898 175041913 2.0E-06 TCATTAATTACTGCCT 16 V_HOXB7_01_M01396 TRANSFAC + 175041900 175041915 0.0E+00 GCAGTAATTAATGAGG 16 V_HOXA7_02_M01336 TRANSFAC + 175041899 175041915 3.0E-06 GGCAGTAATTAATGAGG 17 V_VJUN_01_M00036 TRANSFAC + 175041701 175041716 3.0E-06 TCGATGAAGTCATCCT 16 V_VJUN_01_M00036 TRANSFAC - 175041701 175041716 9.0E-06 AGGATGACTTCATCGA 16 V_POU6F1_02_M01462 TRANSFAC + 175041903 175041919 8.0E-06 GTAATTAATGAGGACAT 17 V_BRN4_01_M01473 TRANSFAC - 175041900 175041916 2.0E-06 TCCTCATTAATTACTGC 17 V_BRN4_01_M01473 TRANSFAC + 175041901 175041917 3.0E-06 CAGTAATTAATGAGGAC 17 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 175041652 175041660 8.0E-06 GAGGGTGGG 9 V_T3R_Q6_M00963 TRANSFAC - 175041935 175041943 7.0E-06 CCTGTCCTT 9 V_PARP_Q3_M01211 TRANSFAC - 175040239 175040248 3.0E-06 TTAGAAAAAG 10 V_NKX61_02_M01469 TRANSFAC - 175041900 175041915 3.0E-06 CCTCATTAATTACTGC 16 V_NKX61_02_M01469 TRANSFAC + 175041902 175041917 1.0E-06 AGTAATTAATGAGGAC 16 V_IPF1_01_M01233 TRANSFAC - 175041903 175041912 4.0E-06 CATTAATTAC 10 V_RHOX11_05_M03099 TRANSFAC + 175041720 175041736 3.0E-06 CTTCTGCTGTTAAACAA 17 V_AIRE_01_M00999 TRANSFAC - 175041539 175041564 4.0E-06 TTTTCCCATGGAAAGTTGGGTAAATT 26 V_BDP1_01_M01796 TRANSFAC + 175036939 175036950 4.0E-06 GGATTTAAACCC 12 V_BARX2_01_M01431 TRANSFAC - 175041898 175041913 8.0E-06 TCATTAATTACTGCCT 16 V_BARX2_01_M01431 TRANSFAC + 175041900 175041915 7.0E-06 GCAGTAATTAATGAGG 16 V_NFAT2_02_M01749 TRANSFAC - 175041551 175041561 2.0E-06 TCCCATGGAAA 11 V_NFAT2_02_M01749 TRANSFAC + 175041552 175041562 3.0E-06 TTCCATGGGAA 11 V_TITF1_Q3_M00432 TRANSFAC - 175041797 175041806 8.0E-06 TGTCAAGTGT 10 V_HOXC5_01_M01454 TRANSFAC - 175041898 175041914 3.0E-06 CTCATTAATTACTGCCT 17 V_HOXC5_01_M01454 TRANSFAC + 175041899 175041915 3.0E-06 GGCAGTAATTAATGAGG 17 V_HB9_01_M01349 TRANSFAC + 175041900 175041915 6.0E-06 GCAGTAATTAATGAGG 16 V_POU6F1_03_M01479 TRANSFAC + 175041903 175041919 4.0E-06 GTAATTAATGAGGACAT 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 175041373 175041390 5.0E-06 GGAAGGTGGGAGGGAGGG 18 V_SIX6_01_M01345 TRANSFAC - 175040227 175040243 2.0E-06 AAAAGTGTATCATCATG 17 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 175041674 175041681 1.0E-05 TGTGGTTT 8 V_HOXD8_01_M01432 TRANSFAC - 175041897 175041913 6.0E-06 TCATTAATTACTGCCTC 17 V_HOXD8_01_M01432 TRANSFAC + 175041900 175041916 5.0E-06 GCAGTAATTAATGAGGA 17 V_LHX9_01_M01367 TRANSFAC - 175041898 175041914 1.0E-06 CTCATTAATTACTGCCT 17 V_LHX9_01_M01367 TRANSFAC + 175041899 175041915 1.0E-05 GGCAGTAATTAATGAGG 17 V_PIT1_Q6_M00802 TRANSFAC + 175040223 175040240 2.0E-06 AATCCATGATGATACACT 18 V_HOXA7_03_M01394 TRANSFAC - 175041898 175041913 7.0E-06 TCATTAATTACTGCCT 16 V_HOXA7_03_M01394 TRANSFAC + 175041900 175041915 2.0E-06 GCAGTAATTAATGAGG 16 V_BRN3C_01_M01408 TRANSFAC - 175041900 175041915 6.0E-06 CCTCATTAATTACTGC 16 V_BRN3C_01_M01408 TRANSFAC + 175041902 175041917 0.0E+00 AGTAATTAATGAGGAC 16 V_MAFK_04_M02880 TRANSFAC - 175040232 175040246 9.0E-06 AGAAAAAGTGTATCA 15 V_IPF1_04_M01236 TRANSFAC - 175041903 175041912 1.0E-05 CATTAATTAC 10 V_DLX1_01_M01439 TRANSFAC + 175041898 175041911 3.0E-06 AGGCAGTAATTAAT 14 V_BRF1_01_M01747 TRANSFAC - 175036938 175036950 8.0E-06 GGGTTTAAATCCT 13 V_RHOX11_06_M03100 TRANSFAC + 175041720 175041736 8.0E-06 CTTCTGCTGTTAAACAA 17 V_FEV_01_M02269 TRANSFAC - 175041496 175041503 1.0E-05 CAGGAAAT 8 V_HOXC9_01_M01416 TRANSFAC + 175041899 175041914 9.0E-06 GGCAGTAATTAATGAG 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.