Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

DUSP21 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 63904 dual specificity phosphatase 21 chrX + 44698248 - 44703748 44703248 Transcription Factor Binding Sites   Download all TFBS in the DUSP21 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 44702598 44702606 1.0E-06 GTAATAAAA 9 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 44702567 44702579 3.0E-06 GTAAACAAAATAA 13 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 44702598 44702607 1.0E-06 GTAATAAAAT 10 SOX21_HMG_DBD_dimeric_15_1 SELEX + 44702768 44702782 3.0E-06 AATAATTTTATGGTT 15 Foxa2_MA0047.2 JASPAR - 44702562 44702573 5.0E-06 TGTTTACTTTCT 12 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 44702598 44702607 2.0E-06 GTAATAAAAT 10 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 44702844 44702860 6.0E-06 CAGTTTTATAGAGATTA 17 SRY_HMG_DBD_dimeric_15_1 SELEX - 44702768 44702782 5.0E-06 AACCATAAAATTATT 15 FOXA1_MA0148.1 JASPAR - 44702563 44702573 2.0E-06 TGTTTACTTTC 11 FOXF2_MA0030.1 JASPAR + 44702562 44702575 6.0E-06 AGAAAGTAAACAAA 14 SOX9_HMG_full_dimeric_16_1 SELEX + 44702575 44702590 3.0E-06 AATAATTTGAACTGTT 16 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 44702564 44702575 0.0E+00 AAAGTAAACAAA 12 RFX4_RFX_DBD_dimeric_16_1 SELEX + 44703162 44703177 1.0E-06 CATTGCCATGGAAACC 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 44703162 44703177 1.0E-06 GGTTTCCATGGCAATG 16 FOXL1_forkhead_full_dimeric_13_1 SELEX + 44702562 44702574 6.0E-06 AGAAAGTAAACAA 13 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 44702857 44702865 4.0E-06 TATGCTAAT 9 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 44702564 44702574 2.0E-06 AAAGTAAACAA 11 Lhx8_homeodomain_DBD_dimeric_12_1 SELEX + 44702778 44702789 7.0E-06 TGGTTACAATCA 12 Lhx8_homeodomain_DBD_dimeric_12_1 SELEX - 44702778 44702789 8.0E-06 TGATTGTAACCA 12 POU2F3_POU_DBD_monomeric_9_1 SELEX - 44702857 44702865 3.0E-06 TATGCTAAT 9 FOXO1_forkhead_DBD_monomeric_8_1 SELEX + 44702567 44702574 7.0E-06 GTAAACAA 8 Sox17_HMG_DBD_dimeric_15_1 SELEX + 44702768 44702782 2.0E-06 AATAATTTTATGGTT 15 POU2F2_POU_DBD_monomeric_11_1 SELEX - 44702856 44702866 2.0E-06 ATATGCTAATC 11 POU3F4_POU_DBD_monomeric_9_1 SELEX - 44702857 44702865 3.0E-06 TATGCTAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 44702857 44702865 3.0E-06 TATGCTAAT 9 Pax4_MA0068.1 JASPAR - 44702746 44702775 5.0E-06 AAATTATTTTCCTGCTTACAAACACATCAG 30 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 44702597 44702606 1.0E-06 GGTAATAAAA 10 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 44702773 44702782 8.0E-06 AACCATAAAA 10 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 44703162 44703177 2.0E-06 CATTGCCATGGAAACC 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 44703162 44703177 0.0E+00 GGTTTCCATGGCAATG 16 POU3F3_POU_DBD_monomeric_13_1 SELEX - 44702855 44702867 3.0E-06 GATATGCTAATCT 13 NFATC1_NFAT_full_dimeric_14_1 SELEX + 44703163 44703176 4.0E-06 ATTGCCATGGAAAC 14 NFATC1_NFAT_full_dimeric_14_1 SELEX - 44703163 44703176 3.0E-06 GTTTCCATGGCAAT 14 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 44702598 44702606 1.0E-06 GTAATAAAA 9 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 44702598 44702607 4.0E-06 GTAATAAAAT 10 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 44702560 44702573 7.0E-06 GAAGAAAGTAAACA 14 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 44702597 44702607 2.0E-06 GGTAATAAAAT 11 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 44702772 44702782 8.0E-06 AACCATAAAAT 11 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX + 44702650 44702663 3.0E-06 CTATGACACAGCTA 14 SOX18_HMG_full_dimeric_15_1 SELEX + 44702768 44702782 8.0E-06 AATAATTTTATGGTT 15 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 44702563 44702573 1.0E-05 GAAAGTAAACA 11 SOX7_HMG_full_dimeric_16_1 SELEX - 44702575 44702590 3.0E-06 AACAGTTCAAATTATT 16 SOX7_HMG_full_dimeric_17_1 SELEX + 44702767 44702783 1.0E-06 AAATAATTTTATGGTTA 17 RFX2_RFX_DBD_dimeric_16_1 SELEX + 44703162 44703177 1.0E-06 CATTGCCATGGAAACC 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 44703162 44703177 1.0E-06 GGTTTCCATGGCAATG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 44703162 44703177 1.0E-06 CATTGCCATGGAAACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 44703162 44703177 1.0E-06 GGTTTCCATGGCAATG 16 POU3F1_POU_DBD_monomeric_12_1 SELEX - 44702855 44702866 2.0E-06 ATATGCTAATCT 12 Foxd3_MA0041.1 JASPAR - 44702565 44702576 8.0E-06 TTTTGTTTACTT 12 POU2F1_POU_DBD_monomeric_12_1 SELEX - 44702856 44702867 4.0E-06 GATATGCTAATC 12 TFEC_bHLH_DBD_dimeric_10_1 SELEX + 44702865 44702874 8.0E-06 ATCACATGAG 10 FOXI1_forkhead_full_dimeric_17_1 SELEX + 44702777 44702793 2.0E-06 ATGGTTACAATCAACAA 17 LHX6_homeodomain_full_dimeric_12_1 SELEX + 44702778 44702789 7.0E-06 TGGTTACAATCA 12 LHX6_homeodomain_full_dimeric_12_1 SELEX - 44702778 44702789 3.0E-06 TGATTGTAACCA 12 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 44702598 44702607 6.0E-06 GTAATAAAAT 10 Sox11_HMG_DBD_dimeric_15_1 SELEX + 44702768 44702782 2.0E-06 AATAATTTTATGGTT 15 FOXB1_forkhead_full_monomeric_9_1 SELEX + 44702566 44702574 7.0E-06 AGTAAACAA 9 FOXO3_forkhead_full_monomeric_8_1 SELEX + 44702567 44702574 7.0E-06 GTAAACAA 8 Sox3_HMG_DBD_dimeric_17_1 SELEX + 44702767 44702783 3.0E-06 AAATAATTTTATGGTTA 17 Sox3_HMG_DBD_dimeric_17_1 SELEX - 44702767 44702783 3.0E-06 TAACCATAAAATTATTT 17 POU3F2_POU_DBD_monomeric_12_1 SELEX - 44702855 44702866 2.0E-06 ATATGCTAATCT 12 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 44702597 44702607 0.0E+00 GGTAATAAAAT 11 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 44702561 44702573 2.0E-06 AAGAAAGTAAACA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 44702565 44702577 2.0E-06 AAGTAAACAAAAT 13 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 44702598 44702606 1.0E-06 GTAATAAAA 9 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 44702567 44702579 4.0E-06 GTAAACAAAATAA 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 44702564 44702574 5.0E-06 AAAGTAAACAA 11 CDX1_homeodomain_DBD_monomeric_9_1 SELEX + 44702598 44702606 1.0E-06 GTAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 44702597 44702607 0.0E+00 GGTAATAAAAT 11 SOX9_HMG_full_dimeric_17_1 SELEX + 44702767 44702783 7.0E-06 AAATAATTTTATGGTTA 17 V_HOXA9_01_M01351 TRANSFAC - 44702768 44702784 1.0E-06 GTAACCATAAAATTATT 17 V_HNF3B_01_M00131 TRANSFAC - 44702564 44702578 7.0E-06 TATTTTGTTTACTTT 15 V_FOXP3_Q4_M00992 TRANSFAC + 44702583 44702599 0.0E+00 GAACTGTTGTTTCAGGT 17 V_ZFP187_03_M02830 TRANSFAC + 44702635 44702648 6.0E-06 GTATGTACAAATGG 14 V_AR_02_M00953 TRANSFAC + 44702921 44702947 8.0E-06 GGAAAGTGTAAGCCCTGTTCTGCAACA 27 V_XFD1_01_M00267 TRANSFAC + 44702564 44702577 1.0E-06 AAAGTAAACAAAAT 14 V_FOXA2_04_M02749 TRANSFAC + 44702562 44702578 0.0E+00 AGAAAGTAAACAAAATA 17 V_DMRT3_01_M01148 TRANSFAC + 44702775 44702789 7.0E-06 TTATGGTTACAATCA 15 V_HMGIY_Q3_M01010 TRANSFAC + 44702545 44702559 1.0E-06 TAGGCATTTTTTTTT 15 V_HMGIY_Q3_M01010 TRANSFAC - 44702573 44702587 4.0E-06 AGTTCAAATTATTTT 15 V_FOXD3_01_M00130 TRANSFAC - 44702565 44702576 8.0E-06 TTTTGTTTACTT 12 V_BCL6_01_M01183 TRANSFAC - 44702564 44702579 1.0E-06 TTATTTTGTTTACTTT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 44701957 44701968 8.0E-06 AATAGATACCAG 12 V_FOXO4_02_M00476 TRANSFAC - 44702564 44702577 0.0E+00 ATTTTGTTTACTTT 14 V_SRY_02_M00160 TRANSFAC + 44702567 44702578 5.0E-06 GTAAACAAAATA 12 V_NFAT3_Q3_M01734 TRANSFAC - 44702763 44702772 3.0E-06 TTATTTTCCT 10 V_OCT1_01_M00135 TRANSFAC - 44702852 44702870 1.0E-06 TGTGATATGCTAATCTCTA 19 V_POU2F3_01_M01476 TRANSFAC - 44702853 44702868 7.0E-06 TGATATGCTAATCTCT 16 V_FOXO3A_Q1_M01137 TRANSFAC + 44702566 44702577 1.0E-06 AGTAAACAAAAT 12 V_POU3F2_02_M00464 TRANSFAC - 44702857 44702866 1.0E-06 ATATGCTAAT 10 V_SOX11_04_M02899 TRANSFAC - 44702570 44702583 9.0E-06 CAAATTATTTTGTT 14 V_HNF3_Q6_01_M01012 TRANSFAC - 44702561 44702578 0.0E+00 TATTTTGTTTACTTTCTT 18 V_FOXJ1_03_M02750 TRANSFAC + 44702564 44702579 0.0E+00 AAAGTAAACAAAATAA 16 V_HFH4_01_M00742 TRANSFAC - 44702564 44702576 8.0E-06 TTTTGTTTACTTT 13 V_HOXD13_01_M01404 TRANSFAC - 44702769 44702784 9.0E-06 GTAACCATAAAATTAT 16 V_HOXD13_01_M01404 TRANSFAC - 44702843 44702858 6.0E-06 ATCTCTATAAAACTGG 16 V_TCFAP2E_04_M02926 TRANSFAC - 44702549 44702562 3.0E-06 TTCAAAAAAAAATG 14 V_TCFAP2E_04_M02926 TRANSFAC - 44702551 44702564 7.0E-06 TCTTCAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 44702552 44702565 1.0E-06 TTCTTCAAAAAAAA 14 V_STAT4_Q4_M01666 TRANSFAC + 44702593 44702606 8.0E-06 TTCAGGTAATAAAA 14 V_ELF4_04_M02850 TRANSFAC - 44702547 44702563 3.0E-06 CTTCAAAAAAAAATGCC 17 V_ELF4_04_M02850 TRANSFAC - 44702548 44702564 0.0E+00 TCTTCAAAAAAAAATGC 17 V_ELF4_04_M02850 TRANSFAC - 44702550 44702566 9.0E-06 TTTCTTCAAAAAAAAAT 17 V_TCF3_04_M02816 TRANSFAC - 44702551 44702567 6.0E-06 CTTTCTTCAAAAAAAAA 17 V_ZFP105_03_M02827 TRANSFAC - 44702548 44702562 8.0E-06 TTCAAAAAAAAATGC 15 V_ZFP105_03_M02827 TRANSFAC + 44702566 44702580 3.0E-06 AGTAAACAAAATAAT 15 V_ZFP105_03_M02827 TRANSFAC + 44702782 44702796 1.0E-06 TACAATCAACAAAGA 15 V_FOXO1_02_M00474 TRANSFAC - 44702564 44702577 0.0E+00 ATTTTGTTTACTTT 14 V_XFD3_01_M00269 TRANSFAC + 44702564 44702577 0.0E+00 AAAGTAAACAAAAT 14 V_AMEF2_Q6_M00403 TRANSFAC + 44702597 44702614 3.0E-06 GGTAATAAAATAGACTCA 18 V_HOXB9_01_M01426 TRANSFAC + 44702595 44702610 3.0E-06 CAGGTAATAAAATAGA 16 V_HOXB9_01_M01426 TRANSFAC - 44702769 44702784 2.0E-06 GTAACCATAAAATTAT 16 V_CDX2_01_M01449 TRANSFAC + 44702594 44702609 1.0E-06 TCAGGTAATAAAATAG 16 V_CDX2_01_M01449 TRANSFAC - 44702770 44702785 6.0E-06 TGTAACCATAAAATTA 16 V_HNF3A_01_M01261 TRANSFAC + 44702565 44702574 1.0E-06 AAGTAAACAA 10 V_CDX2_Q5_M00729 TRANSFAC + 44702769 44702782 1.0E-06 ATAATTTTATGGTT 14 V_TATA_C_M00216 TRANSFAC - 44702846 44702855 7.0E-06 TCTATAAAAC 10 V_CDX1_01_M01373 TRANSFAC + 44702594 44702609 1.0E-06 TCAGGTAATAAAATAG 16 V_CDX1_01_M01373 TRANSFAC - 44702770 44702785 7.0E-06 TGTAACCATAAAATTA 16 V_ZBRK1_01_M01105 TRANSFAC - 44702876 44702890 4.0E-06 GGGGAACAGCATTTG 15 V_TCF7_03_M02817 TRANSFAC - 44702551 44702567 3.0E-06 CTTTCTTCAAAAAAAAA 17 V_XFD2_01_M00268 TRANSFAC + 44702564 44702577 5.0E-06 AAAGTAAACAAAAT 14 V_HFH1_01_M00129 TRANSFAC - 44702565 44702576 6.0E-06 TTTTGTTTACTT 12 V_HOXD9_Q2_M01834 TRANSFAC - 44702773 44702782 4.0E-06 AACCATAAAA 10 V_FREAC2_01_M00290 TRANSFAC + 44702562 44702577 5.0E-06 AGAAAGTAAACAAAAT 16 V_SOX15_03_M02799 TRANSFAC + 44702565 44702581 6.0E-06 AAGTAAACAAAATAATT 17 V_FOXL1_04_M02753 TRANSFAC + 44702562 44702578 0.0E+00 AGAAAGTAAACAAAATA 17 V_PITX1_01_M01484 TRANSFAC + 44702849 44702865 9.0E-06 TTATAGAGATTAGCATA 17 V_FOXO3_01_M00477 TRANSFAC - 44702564 44702577 0.0E+00 ATTTTGTTTACTTT 14 V_MTATA_B_M00320 TRANSFAC - 44702840 44702856 0.0E+00 CTCTATAAAACTGGAGC 17 V_FOXA2_03_M02260 TRANSFAC - 44702562 44702573 5.0E-06 TGTTTACTTTCT 12 V_FOX_Q2_M00809 TRANSFAC - 44702564 44702576 0.0E+00 TTTTGTTTACTTT 13 V_NFAT2_02_M01749 TRANSFAC - 44703164 44703174 8.0E-06 TTCCATGGCAA 11 V_NFAT2_02_M01749 TRANSFAC + 44703165 44703175 4.0E-06 TGCCATGGAAA 11 V_DMRT2_01_M01147 TRANSFAC + 44702774 44702789 3.0E-06 TTTATGGTTACAATCA 16 V_SRF_06_M02916 TRANSFAC - 44702547 44702563 2.0E-06 CTTCAAAAAAAAATGCC 17 V_SRF_06_M02916 TRANSFAC - 44702548 44702564 6.0E-06 TCTTCAAAAAAAAATGC 17 V_SRF_06_M02916 TRANSFAC + 44702566 44702582 8.0E-06 AGTAAACAAAATAATTT 17 V_HFH3_01_M00289 TRANSFAC - 44702564 44702576 4.0E-06 TTTTGTTTACTTT 13 V_FOXJ2_01_M00422 TRANSFAC + 44702561 44702578 0.0E+00 AAGAAAGTAAACAAAATA 18 V_EFC_Q6_M00626 TRANSFAC + 44703162 44703175 4.0E-06 CATTGCCATGGAAA 14 V_SIX6_08_M02897 TRANSFAC - 44702705 44702721 8.0E-06 AACTGATATATAGCCCT 17 V_GSC_01_M01428 TRANSFAC - 44702850 44702866 7.0E-06 ATATGCTAATCTCTATA 17 V_FOXO1_01_M00473 TRANSFAC + 44702566 44702575 3.0E-06 AGTAAACAAA 10 V_HNF3B_Q6_M02014 TRANSFAC - 44702566 44702574 2.0E-06 TTGTTTACT 9 V_TFE_Q6_M01029 TRANSFAC - 44702866 44702873 1.0E-05 TCATGTGA 8 V_HOXA10_01_M01464 TRANSFAC + 44702595 44702610 1.0E-06 CAGGTAATAAAATAGA 16 V_GATA6_04_M02757 TRANSFAC + 44702850 44702866 4.0E-06 TATAGAGATTAGCATAT 17 V_HOXD10_01_M01375 TRANSFAC + 44702595 44702611 0.0E+00 CAGGTAATAAAATAGAC 17 V_HOXD10_01_M01375 TRANSFAC - 44702768 44702784 6.0E-06 GTAACCATAAAATTATT 17 V_FOXK1_03_M02752 TRANSFAC + 44702562 44702578 0.0E+00 AGAAAGTAAACAAAATA 17 V_HOXC9_01_M01416 TRANSFAC + 44702594 44702609 5.0E-06 TCAGGTAATAAAATAG 16 V_OCT4_01_M01125 TRANSFAC - 44702857 44702871 7.0E-06 ATGTGATATGCTAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.