Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

VIPAS39


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
63894 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog chr14 -77923483 - 77928983 77923983

Transcription Factor Binding Sites

 
Download all TFBS in the VIPAS39 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
HSF2_HSF_DBD_trimeric_13_1 SELEX + 77924432 77924444 5.0E-06 TTCTAGTAGTTTC 13
FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 77925762 77925774 9.0E-06 GTCAACAAAGACA 13
Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 77925564 77925576 5.0E-06 AGAAAGGATTAAA 13
SOX9_HMG_full_dimeric_16_1 SELEX + 77924199 77924214 7.0E-06 AGCAATGAGACGTGTT 16
HSF1_HSF_full_trimeric_13_1 SELEX + 77924432 77924444 8.0E-06 TTCTAGTAGTTTC 13
En1_MA0027.1 JASPAR + 77924435 77924445 5.0E-06 TAGTAGTTTCC 11
SRY_HMG_DBD_dimeric_13_2 SELEX - 77925028 77925040 2.0E-06 TGAATGACTTTTA 13
NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX + 77925029 77925037 8.0E-06 AAAAGTCAT 9
POU3F4_POU_DBD_monomeric_11_1 SELEX + 77925720 77925730 9.0E-06 AGCATAATTTT 11
Mafb_bZIP_DBD_monomeric_12_1 SELEX - 77925627 77925638 8.0E-06 ATATTGCTGAGA 12
SOX7_HMG_full_dimeric_17_2 SELEX + 77925026 77925042 4.0E-06 ATTAAAAGTCATTCATA 17
RUNX3_RUNX_DBD_dimeric_16_1 SELEX - 77925009 77925024 1.0E-06 TTACCGCAGGCCGCAA 16
RUNX2_RUNX_DBD_dimeric_16_1 SELEX - 77925009 77925024 1.0E-06 TTACCGCAGGCCGCAA 16
SOX8_HMG_full_dimeric_13_1 SELEX - 77924151 77924163 5.0E-06 GGGAATTGTAGTC 13
Sox17_HMG_DBD_dimeric_15_2 SELEX + 77925027 77925041 6.0E-06 TTAAAAGTCATTCAT 15
ELF3_ETS_full_monomeric_13_1 SELEX + 77924368 77924380 4.0E-06 GAGCCGGAAGTTA 13
FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 77924211 77924224 2.0E-06 GAAAACAAAGAACA 14
HSF4_HSF_DBD_trimeric_13_1 SELEX + 77924432 77924444 2.0E-06 TTCTAGTAGTTTC 13
OTX2_homeodomain_DBD_monomeric_8_1 SELEX + 77925565 77925572 7.0E-06 TTAATCCT 8
MAX_bHLH_DBD_dimer-of-dimers_17_1 SELEX - 77925077 77925093 8.0E-06 CACCTGCACAACACGTT 17
Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 77925756 77925765 9.0E-06 AGCAGCTGTC 10
Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 77925754 77925767 1.0E-05 AAGACAGCTGCTGT 14
znf143_MA0088.1 JASPAR - 77923982 77924001 2.0E-06 CGACTTCCAGCATGCCCTGC 20
znf143_MA0088.1 JASPAR + 77924156 77924175 5.0E-06 CAATTCCCATGAGGCTCAGC 20
NFATC1_NFAT_full_dimeric_20_1 SELEX - 77925716 77925735 8.0E-06 AATGGAAAATTATGCTCTCC 20
PITX1_homeodomain_full_monomeric_9_1 SELEX + 77925564 77925572 2.0E-06 TTTAATCCT 9
EHF_ETS_full_monomeric_12_1 SELEX + 77924368 77924379 1.0E-05 GAGCCGGAAGTT 12
Myf_MA0055.1 JASPAR - 77925755 77925766 4.0E-06 AGACAGCTGCTG 12
ELF5_ETS_full_monomeric_11_1 SELEX + 77924369 77924379 8.0E-06 AGCCGGAAGTT 11
SOX21_HMG_DBD_dimeric_16_1 SELEX + 77924199 77924214 4.0E-06 AGCAATGAGACGTGTT 16
SOX18_HMG_full_dimeric_15_3 SELEX + 77925027 77925041 4.0E-06 TTAAAAGTCATTCAT 15
NR3C1_MA0113.1 JASPAR + 77925717 77925734 2.0E-06 GAGAGCATAATTTTCCAT 18
Sox3_HMG_DBD_dimeric_17_3 SELEX + 77925026 77925042 8.0E-06 ATTAAAAGTCATTCATA 17
MAFK_bZIP_full_monomeric_12_1 SELEX - 77925628 77925639 5.0E-06 CATATTGCTGAG 12
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 77925762 77925774 9.0E-06 GTCAACAAAGACA 13
NFE2L2_MA0150.1 JASPAR - 77924087 77924097 6.0E-06 ATGACCTAGCA 11
ONECUT3_CUT_DBD_monomeric_14_1 SELEX - 77925556 77925569 8.0E-06 ATTAAACCAATAAC 14
FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 77924211 77924224 2.0E-06 GAAAACAAAGAACA 14
V_DMRT4_01_M01149 TRANSFAC + 77925677 77925689 6.0E-06 AAAGTATCAAGTA 13
V_NFAT_Q4_01_M00935 TRANSFAC - 77925725 77925734 1.0E-06 ATGGAAAATT 10
V_OBOX6_01_M01445 TRANSFAC - 77925563 77925577 8.0E-06 CAGAAAGGATTAAAC 15
V_E2A_Q6_01_M02088 TRANSFAC - 77925754 77925766 8.0E-06 AGACAGCTGCTGT 13
V_TCF3_01_M01594 TRANSFAC + 77924214 77924226 2.0E-06 TCTTTGTTTTCCT 13
V_OBOX5_05_M03066 TRANSFAC - 77925560 77925576 4.0E-06 AGAAAGGATTAAACCAA 17
V_DUXL_01_M01390 TRANSFAC - 77924945 77924961 8.0E-06 CAACACAATCAAAGGAG 17
V_SIX6_02_M01398 TRANSFAC + 77925674 77925690 6.0E-06 GTTAAAGTATCAAGTAT 17
V_COE1_Q6_M01871 TRANSFAC - 77924156 77924169 1.0E-06 CCTCATGGGAATTG 14
V_AML3_Q6_M01856 TRANSFAC + 77924041 77924048 1.0E-05 AACCACAA 8
V_FOXO4_02_M00476 TRANSFAC + 77924214 77924227 6.0E-06 TCTTTGTTTTCCTA 14
V_NFAT3_Q3_M01734 TRANSFAC + 77925724 77925733 7.0E-06 TAATTTTCCA 10
V_FOXJ1_03_M02750 TRANSFAC - 77925762 77925777 9.0E-06 ACTGTCAACAAAGACA 16
V_HTF_01_M00538 TRANSFAC - 77924198 77924221 9.0E-06 AACAAAGAACACGTCTCATTGCTT 24
V_PRX2_Q2_M02115 TRANSFAC + 77925022 77925030 5.0E-06 TAAAATTAA 9
V_NFAT2_01_M01748 TRANSFAC - 77925726 77925734 2.0E-06 ATGGAAAAT 9
V_NR3C1_01_M02219 TRANSFAC + 77925717 77925734 2.0E-06 GAGAGCATAATTTTCCAT 18
V_LDSPOLYA_B_M00317 TRANSFAC - 77923956 77923971 4.0E-06 TTCGTGTTTTCTCTCC 16
V_OBOX5_02_M01480 TRANSFAC - 77925560 77925576 4.0E-06 AGAAAGGATTAAACCAA 17
V_MYF_01_M01302 TRANSFAC - 77925755 77925766 4.0E-06 AGACAGCTGCTG 12
V_STAF_01_M00262 TRANSFAC - 77923979 77924000 5.0E-06 GACTTCCAGCATGCCCTGCGGT 22
V_NFAT_Q6_M00302 TRANSFAC - 77924218 77924229 3.0E-06 CATAGGAAAACA 12
V_NFAT_Q6_M00302 TRANSFAC - 77925643 77925654 4.0E-06 AAGTGGAAAACT 12
V_NFAT_Q6_M00302 TRANSFAC - 77925725 77925736 1.0E-06 CAATGGAAAATT 12
V_IRF2_01_M00063 TRANSFAC - 77923453 77923465 5.0E-06 GATAATTGAAACC 13
V_SP4_03_M02810 TRANSFAC - 77923924 77923940 2.0E-06 CCTTCCGCCCCCTTCTC 17
V_HES1_Q2_M01009 TRANSFAC - 77924039 77924053 1.0E-06 AAGCCTTGTGGTTCG 15
V_AML2_01_M01759 TRANSFAC + 77924041 77924048 1.0E-05 AACCACAA 8
V_ARID3A_02_M02839 TRANSFAC + 77925676 77925690 2.0E-06 TAAAGTATCAAGTAT 15
V_MAZ_Q6_01_M02023 TRANSFAC + 77924379 77924392 3.0E-06 TAAGGAGGGGAGGG 14
V_IRF_Q6_M00772 TRANSFAC + 77923450 77923464 7.0E-06 CTTGGTTTCAATTAT 15
V_SOX_Q6_M01014 TRANSFAC + 77924213 77924225 7.0E-06 TTCTTTGTTTTCC 13
V_HMX1_01_M00433 TRANSFAC + 77925510 77925519 8.0E-06 CAAGTGCGAA 10
V_SREBP_Q6_M01168 TRANSFAC - 77924539 77924553 9.0E-06 TCCCTCACCCCACTT 15
V_SZF11_01_M01109 TRANSFAC + 77924659 77924673 2.0E-06 CCAGGGTTTCAGGGT 15
V_GADP_01_M01258 TRANSFAC - 77924368 77924379 6.0E-06 AACTTCCGGCTC 12
V_DUXBL_01_M02968 TRANSFAC - 77924945 77924961 8.0E-06 CAACACAATCAAAGGAG 17
V_HBP1_03_M02762 TRANSFAC - 77925029 77925044 9.0E-06 CCTATGAATGACTTTT 16
V_SP1SP3_Q4_M01219 TRANSFAC - 77923926 77923936 4.0E-06 CCGCCCCCTTC 11
V_IRF4_03_M02768 TRANSFAC - 77923450 77923464 1.0E-05 ATAATTGAAACCAAG 15
V_PNR_01_M01650 TRANSFAC + 77925023 77925036 1.0E-06 AAAATTAAAAGTCA 14
V_HNF4_DR1_Q3_M00764 TRANSFAC - 77924977 77924989 9.0E-06 TGGCCTTAGGCCT 13
V_ISGF3G_03_M02771 TRANSFAC - 77923451 77923465 2.0E-06 GATAATTGAAACCAA 15
V_STAF_02_M00264 TRANSFAC - 77923980 77924000 5.0E-06 GACTTCCAGCATGCCCTGCGG 21
V_STAF_02_M00264 TRANSFAC + 77924157 77924177 1.0E-06 AATTCCCATGAGGCTCAGCAA 21
V_STAF_02_M00264 TRANSFAC + 77925695 77925715 9.0E-06 CCGCACCATCATGCCGAGAAA 21
V_SOX11_03_M02795 TRANSFAC - 77924210 77924226 0.0E+00 AGGAAAACAAAGAACAC 17
V_FOXO1_Q5_M01216 TRANSFAC - 77924216 77924224 5.0E-06 GAAAACAAA 9
V_TFIII_Q6_M00706 TRANSFAC - 77923854 77923862 6.0E-06 AGAGGGAGG 9
V_BCL6B_04_M02844 TRANSFAC - 77924799 77924814 4.0E-06 TCTCCCTCCCCTCAAA 16
V_NEUROD_02_M01288 TRANSFAC + 77925755 77925766 7.0E-06 CAGCAGCTGTCT 12
V_OTX2_Q3_M01719 TRANSFAC - 77925563 77925575 3.0E-06 GAAAGGATTAAAC 13
V_HBP1_04_M02866 TRANSFAC + 77925740 77925756 8.0E-06 TTATACCATTTTCTACA 17
V_MYOD_Q6_02_M02100 TRANSFAC + 77925758 77925766 8.0E-06 CAGCTGTCT 9
V_IRF5_03_M02769 TRANSFAC - 77923451 77923465 7.0E-06 GATAATTGAAACCAA 15
V_GABPBETA_Q3_M01876 TRANSFAC - 77924094 77924104 8.0E-06 AGAGGAAATGA 11
V_EHF_06_M02745 TRANSFAC + 77924366 77924380 0.0E+00 AGGAGCCGGAAGTTA 15
V_GATA1_01_M00075 TRANSFAC - 77925128 77925137 6.0E-06 CCTGATAGTT 10
V_MYOD_Q6_01_M00929 TRANSFAC - 77925752 77925769 9.0E-06 CAAAGACAGCTGCTGTAG 18
V_BARHL1_01_M01332 TRANSFAC - 77923603 77923618 7.0E-06 AACGAGCATTTAACTC 16
V_TCF7_04_M02921 TRANSFAC - 77925498 77925512 9.0E-06 TTGCATTATAAACTT 15
V_DOBOX5_01_M01463 TRANSFAC - 77925560 77925576 6.0E-06 AGAAAGGATTAAACCAA 17
V_FOXO3_01_M00477 TRANSFAC + 77924214 77924227 3.0E-06 TCTTTGTTTTCCTA 14
V_FOXO3_01_M00477 TRANSFAC - 77924593 77924606 5.0E-06 CAGTTGTTGACGTT 14
V_OTX2_01_M01387 TRANSFAC - 77925560 77925576 9.0E-06 AGAAAGGATTAAACCAA 17
V_MYB_Q3_M00773 TRANSFAC - 77924601 77924611 4.0E-06 AGTGCCAGTTG 11
V_FOX_Q2_M00809 TRANSFAC + 77925555 77925567 9.0E-06 GGTTATTGGTTTA 13
V_E47_01_M00002 TRANSFAC + 77925754 77925768 9.0E-06 ACAGCAGCTGTCTTT 15
V_IRF6_03_M02770 TRANSFAC - 77923448 77923464 7.0E-06 ATAATTGAAACCAAGTC 17
V_HSF_Q6_M00641 TRANSFAC + 77924432 77924444 2.0E-06 TTCTAGTAGTTTC 13
V_DMRT2_01_M01147 TRANSFAC + 77925736 77925751 1.0E-05 GAGTTTATACCATTTT 16
V_HSF2_02_M01244 TRANSFAC - 77924432 77924444 4.0E-06 GAAACTACTAGAA 13
V_SIX6_01_M01345 TRANSFAC + 77925674 77925690 4.0E-06 GTTAAAGTATCAAGTAT 17
V_IRF1_01_M00062 TRANSFAC + 77925022 77925034 6.0E-06 TAAAATTAAAAGT 13
V_PITX2_01_M01447 TRANSFAC - 77925560 77925576 4.0E-06 AGAAAGGATTAAACCAA 17
V_NFE2L2_01_M02263 TRANSFAC - 77924087 77924097 6.0E-06 ATGACCTAGCA 11
V_UF1H3BETA_Q6_M01068 TRANSFAC + 77924353 77924366 7.0E-06 GGTGGGAGTGGGGA 14
V_HNF4_01_M00134 TRANSFAC + 77923762 77923780 3.0E-06 AGAGGGGAAAAGATCAAGA 19
V_OBOX5_01_M01381 TRANSFAC - 77925560 77925576 2.0E-06 AGAAAGGATTAAACCAA 17
V_OBOX6_02_M03068 TRANSFAC - 77925563 77925577 8.0E-06 CAGAAAGGATTAAAC 15
V_SREBP1_Q5_M01173 TRANSFAC - 77924539 77924553 9.0E-06 TCCCTCACCCCACTT 15
V_OTX1_01_M01366 TRANSFAC - 77925560 77925576 5.0E-06 AGAAAGGATTAAACCAA 17
V_BHLHB2_04_M02845 TRANSFAC + 77924905 77924927 1.0E-06 GCTTATTACACGTGGCCAGAGGA 23
V_OBOX6_06_M03067 TRANSFAC + 77925560 77925576 2.0E-06 TTGGTTTAATCCTTTCT 17
V_FOXK1_03_M02752 TRANSFAC - 77924213 77924229 9.0E-06 CATAGGAAAACAAAGAA 17
V_FOXK1_03_M02752 TRANSFAC - 77925763 77925779 9.0E-06 ACACTGTCAACAAAGAC 17
V_SMAD1_01_M01590 TRANSFAC - 77924213 77924224 3.0E-06 GAAAACAAAGAA 12
V_SOX9_Q4_M01284 TRANSFAC - 77924212 77924222 3.0E-06 AAACAAAGAAC 11
V_NANOG_02_M01247 TRANSFAC - 77924209 77924228 1.0E-06 ATAGGAAAACAAAGAACACG 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL