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CXCL12 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6387 chemokine (C-X-C motif) ligand 12 chr10 - 44880045 - 44885545 44880545 Transcription Factor Binding Sites   Download all TFBS in the CXCL12 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 44882175 44882193 0.0E+00 CCGCCACCAGAGGGCGCCG 19 MYBL2_MYB_DBD_dimeric_16_1 SELEX - 44878336 44878351 3.0E-06 ACGGTTGGGAAAGTTA 16 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 44879425 44879441 3.0E-06 GCAAACCAAAATAAACT 17 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX - 44880742 44880755 9.0E-06 AAGGTCAAAGGCCG 14 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX - 44880742 44880755 3.0E-06 AAGGTCAAAGGCCG 14 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 44884902 44884912 1.0E-05 AGCCCCAGGCT 11 EWSR1-FLI1_MA0149.1 JASPAR + 44880045 44880062 4.0E-06 GGAGGGTGGGCAGGCAGG 18 NFYA_MA0060.1 JASPAR + 44878566 44878581 6.0E-06 GTCAGCCAATGGGGGA 16 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 44884902 44884912 9.0E-06 AGCCCCAGGCT 11 SCRT2_C2H2_DBD_monomeric_13_1 SELEX + 44878227 44878239 9.0E-06 TTTCAACAGGTCT 13 RHOXF1_homeodomain_full_dimeric_9_1 SELEX + 44878153 44878161 6.0E-06 GGATTATCC 9 RHOXF1_homeodomain_full_dimeric_9_1 SELEX - 44878153 44878161 3.0E-06 GGATAATCC 9 Klf4_MA0039.2 JASPAR + 44878011 44878020 5.0E-06 TGGGTGGGGC 10 TCF7L1_HMG_full_monomeric_12_1 SELEX - 44880745 44880756 6.0E-06 GAAGGTCAAAGG 12 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX - 44879845 44879856 1.0E-05 TCTCCCCACACC 12 SP1_MA0079.2 JASPAR - 44878576 44878585 3.0E-06 CCCCTCCCCC 10 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX - 44880741 44880755 4.0E-06 AAGGTCAAAGGCCGG 15 znf143_MA0088.1 JASPAR - 44884720 44884739 5.0E-06 GATGTTCCAGGATCCAGAGA 20 CTCF_C2H2_full_monomeric_17_1 SELEX + 44882176 44882192 1.0E-06 GGCGCCCTCTGGTGGCG 17 NFATC1_NFAT_full_dimeric_15_1 SELEX + 44880002 44880016 9.0E-06 ATTCGCCTGTGGAAA 15 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 44880742 44880755 6.0E-06 AAGGTCAAAGGCCG 14 SCRT1_C2H2_DBD_monomeric_15_1 SELEX + 44878227 44878241 6.0E-06 TTTCAACAGGTCTTT 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 44880528 44880542 0.0E+00 GGAGAGTGAAAGTGC 15 TFAP2C_TFAP_full_dimeric_11_1 SELEX + 44884902 44884912 8.0E-06 AGCCCCAGGCT 11 HNF4A_MA0114.1 JASPAR - 44880742 44880754 4.0E-06 AGGTCAAAGGCCG 13 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 44879846 44879856 3.0E-06 TCTCCCCACAC 11 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 44880742 44880755 2.0E-06 AAGGTCAAAGGCCG 14 FOXC1_MA0032.1 JASPAR - 44881409 44881416 7.0E-06 AGTAAGTA 8 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 44879845 44879856 7.0E-06 TCTCCCCACACC 12 DPRX_homeodomain_DBD_monomeric_11_1 SELEX - 44878152 44878162 4.0E-06 TGGATAATCCC 11 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 44880742 44880755 4.0E-06 AAGGTCAAAGGCCG 14 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 44884902 44884912 6.0E-06 AGCCCCAGGCT 11 RREB1_MA0073.1 JASPAR - 44877882 44877901 0.0E+00 CCCCAACCCACCCCCTGCCT 20 Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 44884669 44884680 9.0E-06 CAACATGACAGA 12 V_KLF15_Q2_M01714 TRANSFAC + 44879636 44879649 7.0E-06 GAGCTGGGGAGGGG 14 V_NF1_Q6_01_M00806 TRANSFAC - 44884830 44884846 7.0E-06 CTGGTCAAATGCCAAGT 17 V_ZFX_01_M01593 TRANSFAC - 44877785 44877800 3.0E-06 CTGCAGGCCCCGGCCC 16 V_BCL6_01_M01183 TRANSFAC + 44877849 44877864 7.0E-06 TTCCCTGGATTTCTTT 16 V_SP1_Q6_01_M00931 TRANSFAC + 44880594 44880603 4.0E-06 GGGGCGGGGC 10 V_NFAT3_Q3_M01734 TRANSFAC + 44884854 44884863 6.0E-06 TGTTTTTCCT 10 V_EAR2_Q2_M01728 TRANSFAC + 44880742 44880755 3.0E-06 CGGCCTTTGACCTT 14 V_AP2_Q6_01_M00915 TRANSFAC + 44882107 44882119 6.0E-06 GCGTCCCCAGGCC 13 V_SP1_03_M02281 TRANSFAC - 44878576 44878585 3.0E-06 CCCCTCCCCC 10 V_HNF4A_03_M02220 TRANSFAC - 44880742 44880754 4.0E-06 AGGTCAAAGGCCG 13 V_GKLF_02_M01588 TRANSFAC - 44878009 44878020 1.0E-06 GCCCCACCCATC 12 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC - 44878143 44878158 1.0E-05 TAATCCCAGGGGGTGG 16 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 44878568 44878583 4.0E-06 CAGCCAATGGGGGAGG 16 V_NRSE_B_M00325 TRANSFAC - 44879743 44879763 1.0E-06 CACAGCTCCGCGGTCCGCAGC 21 V_RPC155_01_M01798 TRANSFAC + 44878518 44878533 5.0E-06 CCCTGAGTTTAAGCCC 16 V_ZNF219_01_M01122 TRANSFAC - 44877893 44877904 9.0E-06 CACCCCCAACCC 12 V_HNF4_01_B_M00411 TRANSFAC - 44880741 44880755 1.0E-06 AAGGTCAAAGGCCGG 15 V_ZBP89_Q4_M01816 TRANSFAC - 44878575 44878584 4.0E-06 CCCTCCCCCA 10 V_SP1_Q6_M00196 TRANSFAC + 44880587 44880599 7.0E-06 GCGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC + 44880592 44880604 7.0E-06 GCGGGGCGGGGCG 13 V_MAZ_Q6_01_M02023 TRANSFAC - 44878137 44878150 4.0E-06 GGGGGTGGAGGGGG 14 V_ZF5_B_M00333 TRANSFAC - 44879939 44879951 8.0E-06 CGAGAGCGCGCTT 13 V_EGR1_Q6_M01873 TRANSFAC - 44877996 44878005 4.0E-06 GCGGGGGCGG 10 V_TATA_C_M00216 TRANSFAC - 44878239 44878248 6.0E-06 ACTTTAAAAA 10 V_ASCL2_03_M02737 TRANSFAC + 44877708 44877724 6.0E-06 TCCAGCAGCTGCACTGG 17 V_MEF2_04_M00233 TRANSFAC - 44878233 44878254 4.0E-06 TCTGTCACTTTAAAAAGACCTG 22 V_ZIC3_05_M02941 TRANSFAC + 44879978 44879992 8.0E-06 GTGCGCAGCAGGACC 15 V_RREB1_01_M00257 TRANSFAC - 44877888 44877901 0.0E+00 CCCCAACCCACCCC 14 V_RREB1_01_M00257 TRANSFAC - 44879623 44879636 2.0E-06 CCCCAAACACACCT 14 V_HFH1_01_M00129 TRANSFAC + 44879422 44879433 4.0E-06 AACAGTTTATTT 12 V_CTCF_02_M01259 TRANSFAC - 44882177 44882196 0.0E+00 GCGCCGCCACCAGAGGGCGC 20 V_NR1B1_Q6_M02110 TRANSFAC - 44880747 44880756 1.0E-05 GAAGGTCAAA 10 V_CTCF_01_M01200 TRANSFAC - 44882175 44882194 0.0E+00 GCCGCCACCAGAGGGCGCCG 20 V_BLIMP1_Q6_M01066 TRANSFAC + 44880527 44880542 1.0E-06 CGGAGAGTGAAAGTGC 16 V_NKX23_01_M01457 TRANSFAC + 44881402 44881417 2.0E-06 ACCTAAGTACTTACTG 16 V_NKX23_01_M01457 TRANSFAC - 44881402 44881417 5.0E-06 CAGTAAGTACTTAGGT 16 V_SP4_Q5_M01273 TRANSFAC - 44878576 44878586 5.0E-06 GCCCCTCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 44880588 44880598 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 44880593 44880603 2.0E-06 GCCCCGCCCCG 11 V_FAC1_01_M00456 TRANSFAC - 44879400 44879413 1.0E-06 ACACACAAAACAAA 14 V_FOXL1_02_M02857 TRANSFAC - 44879424 44879439 8.0E-06 AAACCAAAATAAACTG 16 V_NKX3A_02_M01383 TRANSFAC - 44881401 44881417 1.0E-06 CAGTAAGTACTTAGGTT 17 V_NFY_01_M00287 TRANSFAC + 44878566 44878581 8.0E-06 GTCAGCCAATGGGGGA 16 V_MYB_Q3_M00773 TRANSFAC + 44884886 44884896 7.0E-06 AGAGCCAGTTG 11 V_SMAD_Q6_01_M00974 TRANSFAC - 44881347 44881357 9.0E-06 TTGTCAGACAC 11 V_ZFP281_01_M01597 TRANSFAC + 44878575 44878585 1.0E-06 TGGGGGAGGGG 11 V_IRF1_Q6_01_M01881 TRANSFAC - 44880528 44880541 4.0E-06 CACTTTCACTCTCC 14 V_NUR77_Q5_M01217 TRANSFAC + 44880748 44880757 9.0E-06 TTGACCTTCT 10 V_E2F_01_M00024 TRANSFAC + 44882270 44882284 9.0E-06 TCCGCGGGAAATCTA 15 V_EWSR1FLI1_01_M02252 TRANSFAC + 44880045 44880062 4.0E-06 GGAGGGTGGGCAGGCAGG 18 V_EKLF_Q5_M01874 TRANSFAC - 44879842 44879851 5.0E-06 CCACACCCTC 10 V_PIT1_Q6_M00802 TRANSFAC + 44878177 44878194 5.0E-06 AATTCTTGCTTCTACTCC 18 V_MEF2_01_M00006 TRANSFAC - 44878232 44878247 8.0E-06 CTTTAAAAAGACCTGT 16 V_UF1H3BETA_Q6_M01068 TRANSFAC + 44877895 44877908 7.0E-06 GTTGGGGGTGGAGC 14 V_HNF4_01_M00134 TRANSFAC - 44880739 44880757 5.0E-06 AGAAGGTCAAAGGCCGGAG 19 V_NFYA_Q5_M02106 TRANSFAC + 44878568 44878581 9.0E-06 CAGCCAATGGGGGA 14 V_T3RALPHA_Q6_M01724 TRANSFAC + 44880171 44880181 1.0E-06 CTTGAGGTCAG 11

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.