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XCL1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6375 chemokine (C motif) ligand 1 chr1 + 168540710 - 168546210 168545710 Transcription Factor Binding Sites   Download all TFBS in the XCL1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 168543601 168543618 0.0E+00 TTACTTAAAAACTAATTG 18 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 168543612 168543629 1.0E-06 CTAATTGTTGAGCAATTA 18 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 168543613 168543630 6.0E-06 ATAATTGCTCAACAATTA 18 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 168549267 168549276 3.0E-06 ACAATTAAAA 10 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 168543602 168543618 7.0E-06 TACTTAAAAACTAATTG 17 ZNF713_C2H2_full_monomeric_17_1 SELEX - 168542115 168542131 3.0E-06 TAAATAACAGACAAGAA 17 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 168549262 168549273 4.0E-06 ATTAAAAATAAA 12 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 168542126 168542134 9.0E-06 TATTTAAAT 9 BARX1_homeodomain_DBD_monomeric_8_1 SELEX - 168549269 168549276 5.0E-06 ACAATTAA 8 GATA5_GATA_DBD_monomeric_8_1 SELEX + 168549320 168549327 7.0E-06 AGATAAGA 8 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 168549262 168549273 3.0E-06 ATTAAAAATAAA 12 GATA4_GATA_DBD_monomeric_8_1 SELEX + 168549320 168549327 7.0E-06 AGATAAGA 8 Pax4_MA0068.1 JASPAR - 168549263 168549292 1.0E-06 GAAAAAAAAACAACAGACAATTAAAAATAA 30 HMX3_homeodomain_DBD_monomeric_11_1 SELEX - 168549267 168549277 3.0E-06 GACAATTAAAA 11 Sox17_HMG_DBD_dimeric_15_2 SELEX - 168542118 168542132 8.0E-06 TTAAATAACAGACAA 15 MEF2A_MA0052.1 JASPAR + 168549263 168549272 7.0E-06 TTATTTTTAA 10 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 168549278 168549291 9.0E-06 AAAAAAAAACAACA 14 PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 168549255 168549265 7.0E-06 TAAAGCAATTA 11 Gata1_MA0035.2 JASPAR + 168543665 168543675 1.0E-05 AGAGATAACAA 11 Gata1_MA0035.2 JASPAR + 168549318 168549328 3.0E-06 TCAGATAAGAG 11 GATA3_GATA_full_monomeric_8_1 SELEX + 168549320 168549327 7.0E-06 AGATAAGA 8 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 168543601 168543618 1.0E-06 TTACTTAAAAACTAATTG 18 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 168543612 168543629 0.0E+00 CTAATTGTTGAGCAATTA 18 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 168543613 168543630 1.0E-06 ATAATTGCTCAACAATTA 18 VENTX_homeodomain_DBD_dimeric_21_1 SELEX + 168543610 168543630 4.0E-06 AACTAATTGTTGAGCAATTAT 21 VENTX_homeodomain_DBD_dimeric_21_1 SELEX - 168543612 168543632 1.0E-06 TAATAATTGCTCAACAATTAG 21 CART1_homeodomain_DBD_dimeric_13_1 SELEX - 168549254 168549266 7.0E-06 ATAAAGCAATTAT 13 EN1_homeodomain_full_dimeric_14_1 SELEX - 168543616 168543629 6.0E-06 TAATTGCTCAACAA 14 EN1_homeodomain_full_dimeric_14_1 SELEX + 168549255 168549268 3.0E-06 TAATTGCTTTATTT 14 HMX2_homeodomain_DBD_monomeric_11_1 SELEX - 168549267 168549277 4.0E-06 GACAATTAAAA 11 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX - 168549255 168549265 7.0E-06 TAAAGCAATTA 11 GBX2_homeodomain_DBD_dimeric_14_1 SELEX + 168543616 168543629 1.0E-06 TTGTTGAGCAATTA 14 GBX2_homeodomain_DBD_dimeric_14_1 SELEX - 168543616 168543629 3.0E-06 TAATTGCTCAACAA 14 TP53_MA0106.1 JASPAR - 168542147 168542166 8.0E-06 CAAAGCATGCACTAGAATGT 20 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 168543601 168543618 1.0E-06 TTACTTAAAAACTAATTG 18 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 168543612 168543629 0.0E+00 CTAATTGTTGAGCAATTA 18 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 168543613 168543630 2.0E-06 ATAATTGCTCAACAATTA 18 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 168549255 168549272 4.0E-06 TTAAAAATAAAGCAATTA 18 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 168549267 168549277 1.0E-05 GACAATTAAAA 11 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 168549278 168549290 8.0E-06 AAAAAAAACAACA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 168549281 168549293 4.0E-06 GGAAAAAAAAACA 13 HMX1_homeodomain_DBD_monomeric_11_1 SELEX + 168543622 168543632 7.0E-06 AGCAATTATTA 11 HMX1_homeodomain_DBD_monomeric_11_1 SELEX - 168549267 168549277 5.0E-06 GACAATTAAAA 11 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 168549278 168549291 9.0E-06 AAAAAAAAACAACA 14 V_FOXP1_01_M00987 TRANSFAC + 168549263 168549282 3.0E-06 TTATTTTTAATTGTCTGTTG 20 V_FOXP1_01_M00987 TRANSFAC + 168549269 168549288 2.0E-06 TTAATTGTCTGTTGTTTTTT 20 V_CEBPG_Q6_M00622 TRANSFAC + 168543600 168543612 7.0E-06 TTTACTTAAAAAC 13 V_MSX3_01_M01341 TRANSFAC - 168549251 168549266 7.0E-06 ATAAAGCAATTATCCA 16 V_MSX3_01_M01341 TRANSFAC - 168549266 168549281 8.0E-06 AACAGACAATTAAAAA 16 V_DBX1_01_M01483 TRANSFAC - 168549263 168549279 0.0E+00 CAGACAATTAAAAATAA 17 V_APOLYA_B_M00310 TRANSFAC - 168549188 168549202 4.0E-06 ATTTAAGGCCATTTG 15 V_EVI1_05_M00082 TRANSFAC - 168542113 168542123 1.0E-05 AGACAAGAAAG 11 V_GATA1_Q6_M02004 TRANSFAC + 168549315 168549329 3.0E-06 GTCTCAGATAAGAGG 15 V_GATA2_02_M00348 TRANSFAC + 168543665 168543674 2.0E-06 AGAGATAACA 10 V_BCL6_01_M01183 TRANSFAC - 168544272 168544287 8.0E-06 TTCTAAGTAGTTCTTT 16 V_BCL6_01_M01183 TRANSFAC + 168549276 168549291 6.0E-06 TCTGTTGTTTTTTTTT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 168549277 168549288 7.0E-06 AAAAAACAACAG 12 V_FOXO4_02_M00476 TRANSFAC + 168549277 168549290 6.0E-06 CTGTTGTTTTTTTT 14 V_PROP1_01_M01294 TRANSFAC + 168549255 168549265 7.0E-06 TAATTGCTTTA 11 V_MEF2_02_M00231 TRANSFAC - 168549258 168549279 1.0E-05 CAGACAATTAAAAATAAAGCAA 22 V_NFAT3_Q3_M01734 TRANSFAC + 168549285 168549294 6.0E-06 TTTTTTTCCT 10 V_HOXA4_01_M01370 TRANSFAC + 168549264 168549280 9.0E-06 TATTTTTAATTGTCTGT 17 V_P50P50_Q3_M01223 TRANSFAC + 168543674 168543686 6.0E-06 AAGGGAATCTCCT 13 V_DLX2_01_M01468 TRANSFAC - 168543618 168543633 1.0E-05 GTAATAATTGCTCAAC 16 V_TCFAP2E_04_M02926 TRANSFAC - 168549283 168549296 3.0E-06 TGAGGAAAAAAAAA 14 V_CDX_Q5_M00991 TRANSFAC - 168549268 168549285 9.0E-06 AAACAACAGACAATTAAA 18 V_MEF2A_Q6_M02024 TRANSFAC + 168542126 168542135 9.0E-06 TATTTAAATC 10 V_MEF2A_Q6_M02024 TRANSFAC + 168549264 168549273 4.0E-06 TATTTTTAAT 10 V_SOX7_03_M02807 TRANSFAC - 168543606 168543627 1.0E-06 ATTGCTCAACAATTAGTTTTTA 22 V_SOX7_03_M02807 TRANSFAC - 168549263 168549284 7.0E-06 AACAACAGACAATTAAAAATAA 22 V_FOXA2_02_M02853 TRANSFAC + 168543665 168543679 1.0E-05 AGAGATAACAAGGGA 15 V_FOXA2_02_M02853 TRANSFAC - 168549276 168549290 1.0E-05 AAAAAAAACAACAGA 15 V_ZFP105_03_M02827 TRANSFAC - 168549263 168549277 1.0E-06 GACAATTAAAAATAA 15 V_ZFP105_03_M02827 TRANSFAC - 168549277 168549291 1.0E-06 AAAAAAAAACAACAG 15 V_HNF1_Q6_M00790 TRANSFAC + 168549259 168549276 9.0E-06 TGCTTTATTTTTAATTGT 18 V_SOX7_04_M02911 TRANSFAC + 168549266 168549287 1.0E-06 TTTTTAATTGTCTGTTGTTTTT 22 V_NKX61_01_M00424 TRANSFAC + 168549266 168549278 1.0E-06 TTTTTAATTGTCT 13 V_CEBPD_Q6_M00621 TRANSFAC + 168549256 168549267 5.0E-06 AATTGCTTTATT 12 V_NFKB_Q6_M00194 TRANSFAC + 168543674 168543687 3.0E-06 AAGGGAATCTCCTA 14 V_FOXK1_04_M02856 TRANSFAC - 168549275 168549289 5.0E-06 AAAAAAACAACAGAC 15 V_LHX2_01_M01325 TRANSFAC + 168543608 168543624 4.0E-06 AAAACTAATTGTTGAGC 17 V_HNF1_Q6_01_M01011 TRANSFAC - 168549257 168549277 0.0E+00 GACAATTAAAAATAAAGCAAT 21 V_NKX52_01_M01315 TRANSFAC + 168543619 168543635 5.0E-06 TTGAGCAATTATTACAT 17 V_NKX52_01_M01315 TRANSFAC - 168549264 168549280 1.0E-06 ACAGACAATTAAAAATA 17 V_HMX1_02_M01481 TRANSFAC + 168543619 168543635 8.0E-06 TTGAGCAATTATTACAT 17 V_HMX1_02_M01481 TRANSFAC - 168549264 168549280 2.0E-06 ACAGACAATTAAAAATA 17 V_GATA1_09_M02254 TRANSFAC + 168543665 168543675 1.0E-05 AGAGATAACAA 11 V_GATA1_09_M02254 TRANSFAC + 168549318 168549328 3.0E-06 TCAGATAAGAG 11 V_NKX3A_01_M00451 TRANSFAC - 168543599 168543610 4.0E-06 TTTTAAGTAAAA 12 V_NCX_02_M01420 TRANSFAC + 168543598 168543614 9.0E-06 GTTTTACTTAAAAACTA 17 V_NCX_02_M01420 TRANSFAC - 168549263 168549279 0.0E+00 CAGACAATTAAAAATAA 17 V_TBP_06_M02814 TRANSFAC + 168542122 168542137 9.0E-06 CTGTTATTTAAATCTT 16 V_LMO2COM_01_M00277 TRANSFAC + 168549295 168549306 9.0E-06 CACCAGGTGTAG 12 V_FOXO1_Q5_M01216 TRANSFAC - 168549279 168549287 5.0E-06 AAAAACAAC 9 V_GATA4_Q3_M00632 TRANSFAC - 168542119 168542130 7.0E-06 AAATAACAGACA 12 V_S8_01_M00099 TRANSFAC - 168549251 168549266 2.0E-06 ATAAAGCAATTATCCA 16 V_SOX15_03_M02799 TRANSFAC - 168543609 168543625 3.0E-06 TGCTCAACAATTAGTTT 17 V_MTF1_06_M02882 TRANSFAC - 168549261 168549274 4.0E-06 AATTAAAAATAAAG 14 V_MTF1_06_M02882 TRANSFAC - 168549262 168549275 6.0E-06 CAATTAAAAATAAA 14 V_TAL1_01_M01591 TRANSFAC + 168542113 168542125 1.0E-05 CTTTCTTGTCTGT 13 V_CEBPA_01_M00116 TRANSFAC - 168543616 168543629 6.0E-06 TAATTGCTCAACAA 14 V_HOXB8_01_M01451 TRANSFAC + 168543619 168543634 6.0E-06 TTGAGCAATTATTACA 16 V_HOXB8_01_M01451 TRANSFAC - 168549265 168549280 2.0E-06 ACAGACAATTAAAAAT 16 V_BARHL1_01_M01332 TRANSFAC - 168549266 168549281 1.0E-06 AACAGACAATTAAAAA 16 V_FOXL1_02_M02857 TRANSFAC - 168542121 168542136 3.0E-06 AGATTTAAATAACAGA 16 V_FOXL1_02_M02857 TRANSFAC - 168549276 168549291 5.0E-06 AAAAAAAAACAACAGA 16 V_SIRT6_01_M01797 TRANSFAC + 168549320 168549327 7.0E-06 AGATAAGA 8 V_NKX3A_02_M01383 TRANSFAC + 168544272 168544288 5.0E-06 AAAGAACTACTTAGAAG 17 V_GATA3_02_M00350 TRANSFAC + 168543665 168543674 2.0E-06 AGAGATAACA 10 V_MSX2_01_M01393 TRANSFAC - 168543608 168543624 9.0E-06 GCTCAACAATTAGTTTT 17 V_MSX1_02_M01412 TRANSFAC + 168543607 168543622 6.0E-06 AAAAACTAATTGTTGA 16 V_FOXO3_01_M00477 TRANSFAC + 168549277 168549290 6.0E-06 CTGTTGTTTTTTTT 14 V_MTATA_B_M00320 TRANSFAC + 168542125 168542141 8.0E-06 TTATTTAAATCTTCCCC 17 V_BARX2_01_M01431 TRANSFAC - 168543607 168543622 3.0E-06 TCAACAATTAGTTTTT 16 V_RSRFC4_01_M00026 TRANSFAC + 168549260 168549275 6.0E-06 GCTTTATTTTTAATTG 16 V_PLZF_02_M01075 TRANSFAC + 168544278 168544306 8.0E-06 CTACTTAGAAGGTATACTTAGTCCAGTTT 29 V_SOX21_04_M02907 TRANSFAC + 168543610 168543626 3.0E-06 AACTAATTGTTGAGCAA 17 V_DMRT2_01_M01147 TRANSFAC - 168543593 168543608 8.0E-06 TTAAGTAAAACAATTT 16 V_GATA2_03_M00349 TRANSFAC + 168543665 168543674 2.0E-06 AGAGATAACA 10 V_GATA2_03_M00349 TRANSFAC + 168549318 168549327 7.0E-06 TCAGATAAGA 10 V_SRF_06_M02916 TRANSFAC - 168549258 168549274 6.0E-06 AATTAAAAATAAAGCAA 17 V_SRF_06_M02916 TRANSFAC - 168549276 168549292 6.0E-06 GAAAAAAAAACAACAGA 17 V_SRF_06_M02916 TRANSFAC - 168549277 168549293 3.0E-06 GGAAAAAAAAACAACAG 17 V_SRF_06_M02916 TRANSFAC - 168549278 168549294 4.0E-06 AGGAAAAAAAAACAACA 17 V_SRF_06_M02916 TRANSFAC - 168549279 168549295 2.0E-06 GAGGAAAAAAAAACAAC 17 V_SRF_06_M02916 TRANSFAC - 168549280 168549296 5.0E-06 TGAGGAAAAAAAAACAA 17 V_SRF_06_M02916 TRANSFAC - 168549281 168549297 5.0E-06 GTGAGGAAAAAAAAACA 17 V_HOXD8_01_M01432 TRANSFAC + 168543620 168543636 9.0E-06 TGAGCAATTATTACATA 17 V_SIX6_08_M02897 TRANSFAC + 168544351 168544367 6.0E-06 TCCCTATATATCAGTAT 17 V_HOMEZ_01_M01429 TRANSFAC - 168543604 168543620 9.0E-06 AACAATTAGTTTTTAAG 17 V_BARHL2_01_M01446 TRANSFAC - 168549251 168549266 1.0E-06 ATAAAGCAATTATCCA 16 V_BARHL2_01_M01446 TRANSFAC - 168549266 168549281 1.0E-06 AACAGACAATTAAAAA 16 V_SOX15_04_M02903 TRANSFAC + 168542140 168542154 9.0E-06 CCAAATGACATTCTA 15 V_SOX15_04_M02903 TRANSFAC - 168542140 168542154 4.0E-06 TAGAATGTCATTTGG 15 V_SRY_05_M02917 TRANSFAC - 168543610 168543626 9.0E-06 TTGCTCAACAATTAGTT 17 V_MEF2A_05_M01301 TRANSFAC + 168542123 168542134 7.0E-06 TGTTATTTAAAT 12 V_HMX3_02_M01413 TRANSFAC + 168543619 168543635 5.0E-06 TTGAGCAATTATTACAT 17 V_HMX3_02_M01413 TRANSFAC - 168549264 168549280 1.0E-06 ACAGACAATTAAAAATA 17 V_SOX5_07_M02909 TRANSFAC + 168543609 168543625 7.0E-06 AAACTAATTGTTGAGCA 17 V_BARX1_01_M01340 TRANSFAC - 168543607 168543622 8.0E-06 TCAACAATTAGTTTTT 16 V_BARX1_01_M01340 TRANSFAC + 168543609 168543624 8.0E-06 AAACTAATTGTTGAGC 16 V_BARX1_01_M01340 TRANSFAC + 168543620 168543635 9.0E-06 TGAGCAATTATTACAT 16 V_BARX1_01_M01340 TRANSFAC - 168549249 168549264 4.0E-06 AAAGCAATTATCCAGA 16 V_HOXD10_01_M01375 TRANSFAC - 168549263 168549279 1.0E-06 CAGACAATTAAAAATAA 17 V_LTF_Q6_M01692 TRANSFAC - 168543648 168543656 6.0E-06 GGCACTTGC 9 V_TCF3_05_M02920 TRANSFAC - 168549282 168549296 4.0E-06 TGAGGAAAAAAAAAC 15 V_GLIS2_04_M02863 TRANSFAC - 168549260 168549273 7.0E-06 ATTAAAAATAAAGC 14 V_GBX1_01_M01371 TRANSFAC - 168543608 168543624 7.0E-06 GCTCAACAATTAGTTTT 17 V_PAX4_04_M00380 TRANSFAC + 168543590 168543619 8.0E-06 AAAAAATTGTTTTACTTAAAAACTAATTGT 30 V_CEBPA_Q6_M01866 TRANSFAC + 168543616 168543628 3.0E-06 TTGTTGAGCAATT 13 V_GATA1_06_M00347 TRANSFAC + 168543665 168543674 8.0E-06 AGAGATAACA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.