Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CCL24 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6369 chemokine (C-C motif) ligand 24 chr7 - 75442533 - 75448033 75443033 Transcription Factor Binding Sites   Download all TFBS in the CCL24 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Sox1_HMG_DBD_dimeric_14_1 SELEX - 75444064 75444077 7.0E-06 TGAATTTCCAGGCA 14 SOX10_HMG_full_dimeric_14_1 SELEX - 75444064 75444077 2.0E-06 TGAATTTCCAGGCA 14 SPIC_ETS_full_monomeric_14_1 SELEX + 75443225 75443238 1.0E-06 GGAAAGAGGAAGTT 14 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 75443170 75443180 3.0E-06 AACACGCCCCC 11 En1_MA0027.1 JASPAR + 75443234 75443244 5.0E-06 AAGTTGTTGTC 11 FOXL1_forkhead_full_dimeric_13_1 SELEX - 75438961 75438973 3.0E-06 TTTCAACAAACAT 13 Esrrb_MA0141.1 JASPAR + 75438798 75438809 3.0E-06 CTTTCAAGGTCA 12 SOX8_HMG_DBD_dimeric_14_1 SELEX - 75444064 75444077 2.0E-06 TGAATTTCCAGGCA 14 SPIB_ETS_DBD_monomeric_14_1 SELEX + 75443225 75443238 0.0E+00 GGAAAGAGGAAGTT 14 TCF7L1_HMG_full_monomeric_12_1 SELEX + 75443326 75443337 1.0E-06 CAAGTTCAAAGG 12 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX + 75442632 75442643 3.0E-06 TGCCTTGAGGCA 12 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX - 75442632 75442643 1.0E-06 TGCCTCAAGGCA 12 LEF1_HMG_DBD_monomeric_15_1 SELEX + 75443326 75443340 9.0E-06 CAAGTTCAAAGGTGT 15 POU3F3_POU_DBD_monomeric_13_1 SELEX - 75438744 75438756 9.0E-06 AATATGTAAGTTT 13 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 75443144 75443159 5.0E-06 TGCCCTTTATGGGGCA 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 75443144 75443159 6.0E-06 TGCCCCATAAAGGGCA 16 SP1_MA0079.2 JASPAR - 75443298 75443307 3.0E-06 CCCCTCCCCC 10 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 75444067 75444080 6.0E-06 CTGGAAATTCACAT 14 ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX + 75438801 75438810 1.0E-06 TCAAGGTCAT 10 SOX9_HMG_full_dimeric_16_3 SELEX - 75444063 75444078 1.0E-06 GTGAATTTCCAGGCAT 16 Tcf7_HMG_DBD_monomeric_12_1 SELEX + 75443326 75443337 4.0E-06 CAAGTTCAAAGG 12 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 75438962 75438972 9.0E-06 TTCAACAAACA 11 PRDM4_C2H2_full_monomeric_13_1 SELEX - 75443978 75443990 3.0E-06 CTTCAAGGCCACC 13 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX + 75438800 75438810 0.0E+00 TTCAAGGTCAT 11 ZNF282_C2H2_DBD_monomeric_17_1 SELEX - 75444048 75444064 8.0E-06 ATTTCCCACTTCCCTAG 17 TFAP2C_TFAP_full_dimeric_12_1 SELEX + 75442632 75442643 7.0E-06 TGCCTTGAGGCA 12 TFAP2C_TFAP_full_dimeric_12_1 SELEX - 75442632 75442643 1.0E-06 TGCCTCAAGGCA 12 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX + 75438801 75438811 1.0E-06 TCAAGGTCATG 11 SPI1_ETS_full_monomeric_14_1 SELEX + 75443225 75443238 0.0E+00 GGAAAGAGGAAGTT 14 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX - 75446590 75446603 7.0E-06 CCTCCCCACACACC 14 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX + 75442632 75442643 6.0E-06 TGCCTTGAGGCA 12 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX - 75442632 75442643 2.0E-06 TGCCTCAAGGCA 12 RORA_1_MA0071.1 JASPAR + 75438800 75438809 3.0E-06 TTCAAGGTCA 10 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 75438962 75438974 4.0E-06 ATTTCAACAAACA 13 FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 75438955 75438968 7.0E-06 AATAACATGTTTGT 14 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX + 75442632 75442643 3.0E-06 TGCCTTGAGGCA 12 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX - 75442632 75442643 2.0E-06 TGCCTCAAGGCA 12 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 75442698 75442711 7.0E-06 GGAAACAAAGAACA 14 V_HNF3B_01_M00131 TRANSFAC + 75438909 75438923 5.0E-06 TGTATCATTTTTTTA 15 V_SPI1_01_M01203 TRANSFAC + 75443225 75443241 2.0E-06 GGAAAGAGGAAGTTGTT 17 V_TGIF_01_M00418 TRANSFAC - 75446496 75446506 1.0E-06 AGCTGTCATAA 11 V_AP1_Q2_M00173 TRANSFAC - 75444031 75444041 2.0E-06 GGTGACTAAGT 11 V_MEIS1_02_M01419 TRANSFAC - 75446495 75446510 1.0E-06 GAAGAGCTGTCATAAG 16 V_DBX1_01_M01483 TRANSFAC + 75438971 75438987 3.0E-06 AAATATTTTAAAAATTT 17 V_PREP1_01_M01459 TRANSFAC - 75446495 75446510 2.0E-06 GAAGAGCTGTCATAAG 16 V_SOX40_04_M02908 TRANSFAC - 75438869 75438884 8.0E-06 TAGAATTATAACATGA 16 V_ZFP410_04_M02936 TRANSFAC - 75446592 75446608 4.0E-06 TTCCTCCTCCCCACACA 17 V_SRY_07_M02813 TRANSFAC - 75438869 75438884 8.0E-06 TAGAATTATAACATGA 16 V_SMAD3_Q6_01_M01888 TRANSFAC + 75446627 75446639 7.0E-06 GGTCAGACAGAGG 13 V_SIX6_02_M01398 TRANSFAC + 75438904 75438920 2.0E-06 CATCGTGTATCATTTTT 17 V_RORA1_01_M00156 TRANSFAC + 75438798 75438810 4.0E-06 CTTTCAAGGTCAT 13 V_BCL6_01_M01183 TRANSFAC + 75438964 75438979 0.0E+00 TTTGTTGAAATATTTT 16 V_ERR3_Q2_01_M02094 TRANSFAC + 75438799 75438811 1.0E-06 TTTCAAGGTCATG 13 V_LRH1_Q5_01_M02098 TRANSFAC + 75438799 75438809 0.0E+00 TTTCAAGGTCA 11 V_LRH1_Q5_01_M02098 TRANSFAC - 75443980 75443990 5.0E-06 CTTCAAGGCCA 11 V_SPIB_02_M02041 TRANSFAC + 75443229 75443238 8.0E-06 AGAGGAAGTT 10 V_IK_Q5_M01169 TRANSFAC + 75439036 75439045 3.0E-06 TTTGGGAGGC 10 V_MEF2_02_M00231 TRANSFAC - 75446505 75446526 4.0E-06 TGGGGAGCAAAAATTAGAAGAG 22 V_EGR_Q6_M00807 TRANSFAC - 75442578 75442588 1.0E-05 GTGGGGGCAGG 11 V_MEIS1AHOXA9_01_M00420 TRANSFAC + 75446499 75446512 8.0E-06 TGACAGCTCTTCTA 14 V_OCT1_01_M00135 TRANSFAC - 75438741 75438759 9.0E-06 CCAAATATGTAAGTTTTCC 19 V_CEBP_Q2_M00190 TRANSFAC - 75438946 75438959 7.0E-06 TTATTGCACAAGGA 14 V_EAR2_Q2_M01728 TRANSFAC + 75443137 75443150 1.0E-05 CTCCCTCTGCCCTT 14 V_MAF_Q6_M00648 TRANSFAC + 75446600 75446615 6.0E-06 GAGGAGGAAGTTGGGG 16 V_SP1_03_M02281 TRANSFAC - 75443298 75443307 3.0E-06 CCCCTCCCCC 10 V_PITX2_Q6_M02114 TRANSFAC + 75439022 75439031 9.0E-06 TGTAATTCCA 10 V_COUPTF_Q6_M01036 TRANSFAC - 75444846 75444868 1.0E-06 CCTCCTGAACTTTCCTCCTGGCA 23 V_PU1_Q4_M01172 TRANSFAC - 75443226 75443244 0.0E+00 GACAACAACTTCCTCTTTC 19 V_LYF1_01_M00141 TRANSFAC + 75439036 75439044 9.0E-06 TTTGGGAGG 9 V_MEF2A_Q6_M02024 TRANSFAC + 75438974 75438983 2.0E-06 TATTTTAAAA 10 V_TGIF2_01_M01407 TRANSFAC - 75446495 75446510 3.0E-06 GAAGAGCTGTCATAAG 16 V_AP1_Q6_M00174 TRANSFAC - 75444031 75444041 7.0E-06 GGTGACTAAGT 11 V_ETS_Q4_M00771 TRANSFAC - 75443230 75443241 6.0E-06 AACAACTTCCTC 12 V_TCF3_04_M02816 TRANSFAC - 75438883 75438899 5.0E-06 CTTGCTTCAAAGAATTA 17 V_MEIS2_01_M01488 TRANSFAC - 75446495 75446510 2.0E-06 GAAGAGCTGTCATAAG 16 V_TGIF_02_M01346 TRANSFAC + 75446494 75446510 4.0E-06 TCTTATGACAGCTCTTC 17 V_SPI1_03_M02078 TRANSFAC + 75443229 75443238 2.0E-06 AGAGGAAGTT 10 V_CART1_01_M00416 TRANSFAC - 75446771 75446788 2.0E-06 CCTTAATGGGTATTACTA 18 V_ARID5A_03_M02736 TRANSFAC - 75438966 75438979 7.0E-06 AAAATATTTCAACA 14 V_ARID5A_03_M02736 TRANSFAC + 75438970 75438983 7.0E-06 GAAATATTTTAAAA 14 V_SIX1_01_M01313 TRANSFAC + 75438904 75438920 5.0E-06 CATCGTGTATCATTTTT 17 V_KROX_Q6_M00982 TRANSFAC + 75442578 75442591 3.0E-06 CCTGCCCCCACCCC 14 V_ZBP89_Q4_M01816 TRANSFAC - 75443297 75443306 4.0E-06 CCCTCCCCCA 10 V_RSRFC4_Q2_M00407 TRANSFAC + 75439114 75439130 1.0E-05 CTACTAAAAATACAAAA 17 V_IRX4_01_M01410 TRANSFAC + 75438864 75438880 6.0E-06 TGTGTTCATGTTATAAT 17 V_IRX4_01_M01410 TRANSFAC - 75438953 75438969 2.0E-06 AACAAACATGTTATTGC 17 V_SIX3_01_M01358 TRANSFAC + 75438904 75438920 3.0E-06 CATCGTGTATCATTTTT 17 V_SIX3_01_M01358 TRANSFAC - 75446769 75446785 6.0E-06 TAATGGGTATTACTAAT 17 V_HOXA3_07_M02869 TRANSFAC + 75446775 75446788 1.0E-06 AATACCCATTAAGG 14 V_AP1_Q4_M00188 TRANSFAC - 75444031 75444041 0.0E+00 GGTGACTAAGT 11 V_SOX_Q6_M01014 TRANSFAC - 75442697 75442709 3.0E-06 TTCTTTGTTTCCA 13 V_MEF2_03_M00232 TRANSFAC - 75438968 75438989 1.0E-05 CCAAATTTTTAAAATATTTCAA 22 V_ELF5_01_M01197 TRANSFAC + 75443228 75443238 1.0E-05 AAGAGGAAGTT 11 V_OCT1_04_M00138 TRANSFAC + 75438871 75438893 0.0E+00 ATGTTATAATTCTAATTCTTTGA 23 V_ERR1_Q3_M01841 TRANSFAC - 75438798 75438812 0.0E+00 GCATGACCTTGAAAG 15 V_MEF2_04_M00233 TRANSFAC + 75439110 75439131 3.0E-06 ATCTCTACTAAAAATACAAAAT 22 V_SPIB_01_M01204 TRANSFAC + 75443225 75443241 0.0E+00 GGAAAGAGGAAGTTGTT 17 V_TCF7_03_M02817 TRANSFAC - 75438883 75438899 6.0E-06 CTTGCTTCAAAGAATTA 17 V_RREB1_01_M00257 TRANSFAC - 75446587 75446600 7.0E-06 CCCCACACACCACA 14 V_NCX_02_M01420 TRANSFAC + 75438971 75438987 2.0E-06 AAATATTTTAAAAATTT 17 V_MAFK_Q3_M02022 TRANSFAC - 75443256 75443266 6.0E-06 TGACTCAGCTG 11 V_TBP_06_M02814 TRANSFAC + 75438973 75438988 5.0E-06 ATATTTTAAAAATTTG 16 V_TGIF1_01_M03111 TRANSFAC + 75446494 75446510 4.0E-06 TCTTATGACAGCTCTTC 17 V_IRX3_01_M01318 TRANSFAC - 75438953 75438969 6.0E-06 AACAAACATGTTATTGC 17 V_SOX11_03_M02795 TRANSFAC + 75442696 75442712 1.0E-06 TTGGAAACAAAGAACAT 17 V_SIX2_01_M01433 TRANSFAC + 75438904 75438920 5.0E-06 CATCGTGTATCATTTTT 17 V_TBX5_01_M01019 TRANSFAC + 75443333 75443344 7.0E-06 AAAGGTGTTGGA 12 V_IRX5_01_M01472 TRANSFAC - 75438953 75438969 5.0E-06 AACAAACATGTTATTGC 17 V_MAF_Q6_01_M00983 TRANSFAC + 75443257 75443267 4.0E-06 AGCTGAGTCAA 11 V_SF1_Q6_01_M01132 TRANSFAC - 75438801 75438809 3.0E-06 TGACCTTGA 9 V_TFIII_Q6_M00706 TRANSFAC - 75443136 75443144 6.0E-06 AGAGGGAGG 9 V_NEUROD_02_M01288 TRANSFAC - 75442656 75442667 9.0E-06 TACCAGCTGTCC 12 V_ELF1_Q6_M00746 TRANSFAC + 75443226 75443237 0.0E+00 GAAAGAGGAAGT 12 V_ELF1_Q6_M00746 TRANSFAC + 75446599 75446610 1.0E-05 GGAGGAGGAAGT 12 V_IRX3_02_M01485 TRANSFAC + 75438864 75438880 6.0E-06 TGTGTTCATGTTATAAT 17 V_IRX3_02_M01485 TRANSFAC - 75438953 75438969 9.0E-06 AACAAACATGTTATTGC 17 V_LRH1_Q5_M01142 TRANSFAC - 75438799 75438810 3.0E-06 ATGACCTTGAAA 12 V_MYOD_Q6_02_M02100 TRANSFAC - 75444879 75444887 4.0E-06 CAGCTGTCA 9 V_MAZR_01_M00491 TRANSFAC + 75443298 75443310 4.0E-06 GGGGGAGGGGACA 13 V_MRG2_01_M01395 TRANSFAC - 75446495 75446510 2.0E-06 GAAGAGCTGTCATAAG 16 V_PKNOX2_01_M01411 TRANSFAC - 75446495 75446510 5.0E-06 GAAGAGCTGTCATAAG 16 V_EOMES_04_M02851 TRANSFAC + 75443331 75443346 6.0E-06 TCAAAGGTGTTGGATG 16 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 75448021 75448029 8.0E-06 GAGGGTGGG 9 V_AP1FJ_Q2_M00172 TRANSFAC - 75444031 75444041 2.0E-06 GGTGACTAAGT 11 V_ERR1_Q2_M00511 TRANSFAC + 75438798 75438811 5.0E-06 CTTTCAAGGTCATG 14 V_ERR1_Q2_M00511 TRANSFAC + 75446719 75446732 4.0E-06 AGCAGAAGGTCATT 14 V_ERR2_01_M01589 TRANSFAC + 75438801 75438812 1.0E-06 TCAAGGTCATGC 12 V_TCFAP2B_03_M02820 TRANSFAC - 75442631 75442644 5.0E-06 ATGCCTCAAGGCAG 14 V_FPM315_01_M01587 TRANSFAC + 75446596 75446607 6.0E-06 TGGGGAGGAGGA 12 V_TCF4_Q5_M00671 TRANSFAC - 75443330 75443337 1.0E-05 CCTTTGAA 8 V_ASCL2_04_M02841 TRANSFAC - 75446671 75446686 0.0E+00 GCATCCCCGCCCTATT 16 V_SPIC_02_M02077 TRANSFAC + 75443229 75443238 1.0E-06 AGAGGAAGTT 10 V_STAT1STAT1_Q3_M01212 TRANSFAC - 75443194 75443206 8.0E-06 TTTTCAAGGAAGC 13 V_ESRRA_03_M02748 TRANSFAC + 75438798 75438814 0.0E+00 CTTTCAAGGTCATGCAA 17 V_SMAD_Q6_01_M00974 TRANSFAC + 75446626 75446636 7.0E-06 TGGTCAGACAG 11 V_ZFP281_01_M01597 TRANSFAC + 75443297 75443307 1.0E-06 TGGGGGAGGGG 11 V_CEBPB_Q6_M01896 TRANSFAC + 75438949 75438958 1.0E-06 TTGTGCAATA 10 V_SREBP_Q3_M00776 TRANSFAC + 75443307 75443318 3.0E-06 GACATCACCCCA 12 V_BBX_03_M02739 TRANSFAC + 75438883 75438897 5.0E-06 TAATTCTTTGAAGCA 15 V_OCT1_06_M00162 TRANSFAC + 75438743 75438756 4.0E-06 AAAACTTACATATT 14 V_IRX2_01_M01405 TRANSFAC - 75438953 75438969 6.0E-06 AACAAACATGTTATTGC 17 V_LEF1TCF1_Q4_M00978 TRANSFAC - 75443327 75443337 2.0E-06 CCTTTGAACTT 11 V_OCT1_07_M00248 TRANSFAC + 75438876 75438887 7.0E-06 ATAATTCTAATT 12 V_SREBP1_02_M00221 TRANSFAC + 75443309 75443319 1.0E-06 CATCACCCCAC 11 V_SRF_06_M02916 TRANSFAC + 75439117 75439133 9.0E-06 CTAAAAATACAAAATTA 17 V_HFH3_01_M00289 TRANSFAC + 75438959 75438971 8.0E-06 ACATGTTTGTTGA 13 V_FOXJ2_01_M00422 TRANSFAC - 75438957 75438974 4.0E-06 ATTTCAACAAACATGTTA 18 V_SIX6_01_M01345 TRANSFAC + 75438904 75438920 5.0E-06 CATCGTGTATCATTTTT 17 V_ERR1_Q2_01_M02093 TRANSFAC + 75438802 75438812 8.0E-06 CAAGGTCATGC 11 V_NFE2_Q6_M02104 TRANSFAC - 75443253 75443268 6.0E-06 CTTGACTCAGCTGGGC 16 V_NFE2_01_M00037 TRANSFAC + 75443257 75443267 5.0E-06 AGCTGAGTCAA 11 V_IRXB3_01_M01377 TRANSFAC + 75438864 75438880 8.0E-06 TGTGTTCATGTTATAAT 17 V_ARID5A_04_M02840 TRANSFAC + 75439117 75439133 4.0E-06 CTAAAAATACAAAATTA 17 V_SEF1_C_M00214 TRANSFAC + 75443205 75443223 1.0E-06 AATCCTGAGGCCTGTGGTC 19 V_PAX4_04_M00380 TRANSFAC - 75438862 75438891 6.0E-06 AAAGAATTAGAATTATAACATGAACACACT 30 V_SOX9_Q4_M01284 TRANSFAC + 75442700 75442710 3.0E-06 AAACAAAGAAC 11 V_SPI1_02_M02043 TRANSFAC + 75443229 75443238 6.0E-06 AGAGGAAGTT 10 V_SPIB_03_M02076 TRANSFAC + 75443229 75443238 2.0E-06 AGAGGAAGTT 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.