Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

BHMT


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
635 betaine--homocysteine S-methyltransferase chr5 +78402603 - 78408103 78407603

Transcription Factor Binding Sites

 
Download all TFBS in the BHMT promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR - 78405862 78405880 8.0E-06 CTGGCACTAGGAGGCGGTA 19
BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 78403030 78403046 6.0E-06 TGCTTACAAAGCACTTA 17
ZNF713_C2H2_full_monomeric_17_1 SELEX + 78403099 78403115 0.0E+00 AAAAAAAAAGCCACAAA 17
ZNF435_C2H2_full_dimeric_18_1 SELEX + 78403028 78403045 3.0E-06 AATGCTTACAAAGCACTT 18
SOX8_HMG_full_dimeric_15_1 SELEX - 78404111 78404125 5.0E-06 GGCAAGGCCAGTGTT 15
MAFF_bZIP_DBD_dimeric_15_1 SELEX + 78403029 78403043 9.0E-06 ATGCTTACAAAGCAC 15
MAFF_bZIP_DBD_dimeric_15_1 SELEX - 78403029 78403043 6.0E-06 GTGCTTTGTAAGCAT 15
Mafb_bZIP_DBD_dimeric_17_1 SELEX + 78403028 78403044 2.0E-06 AATGCTTACAAAGCACT 17
Mafb_bZIP_DBD_dimeric_17_1 SELEX - 78403028 78403044 1.0E-06 AGTGCTTTGTAAGCATT 17
MAFK_bZIP_DBD_dimeric_21_1 SELEX + 78403026 78403046 1.0E-06 CTAATGCTTACAAAGCACTTA 21
MAFK_bZIP_DBD_dimeric_21_1 SELEX - 78403026 78403046 1.0E-06 TAAGTGCTTTGTAAGCATTAG 21
NRL_bZIP_DBD_monomeric_11_1 SELEX - 78404158 78404168 8.0E-06 AAACTGCTGAT 11
MAFG_bZIP_full_dimeric_21_1 SELEX + 78403026 78403046 3.0E-06 CTAATGCTTACAAAGCACTTA 21
MAFG_bZIP_full_dimeric_21_1 SELEX - 78403026 78403046 1.0E-06 TAAGTGCTTTGTAAGCATTAG 21
RUNX1_MA0002.2 JASPAR - 78403106 78403116 9.0E-06 TTTTGTGGCTT 11
FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 78402908 78402921 4.0E-06 GTCAATAGTAAGCA 14
V_DMRT4_01_M01149 TRANSFAC + 78403078 78403090 8.0E-06 AAAGTTACAGTTA 13
V_DBX1_01_M01483 TRANSFAC + 78404095 78404111 8.0E-06 CATTCAATTTTTTAAAA 17
V_NKX29_01_M01352 TRANSFAC + 78405849 78405865 9.0E-06 GTTAGAGTGCTTATACC 17
V_BCL6_01_M01183 TRANSFAC - 78403100 78403115 6.0E-06 TTTGTGGCTTTTTTTT 16
V_MMEF2_Q6_M00405 TRANSFAC + 78403092 78403107 3.0E-06 CTGCTTAAAAAAAAAA 16
V_ZFP691_03_M02833 TRANSFAC + 78403064 78403080 3.0E-06 TAGGAAGTGCTCATAAA 17
V_TCFAP2E_04_M02926 TRANSFAC + 78403093 78403106 0.0E+00 TGCTTAAAAAAAAA 14
V_HOXA13_03_M01430 TRANSFAC + 78403069 78403084 7.0E-06 AGTGCTCATAAAGTTA 16
V_HOXC13_01_M01317 TRANSFAC + 78403069 78403084 2.0E-06 AGTGCTCATAAAGTTA 16
V_TAL1_GATA1_01_M02243 TRANSFAC - 78403087 78403104 5.0E-06 TTTTTTTAAGCAGATAAC 18
V_ELF4_04_M02850 TRANSFAC + 78403094 78403110 0.0E+00 GCTTAAAAAAAAAAGCC 17
V_ELF4_04_M02850 TRANSFAC + 78403095 78403111 5.0E-06 CTTAAAAAAAAAAGCCA 17
V_RUNX1_01_M02257 TRANSFAC - 78403106 78403116 9.0E-06 TTTTGTGGCTT 11
V_SOX18_03_M02801 TRANSFAC + 78404097 78404112 6.0E-06 TTCAATTTTTTAAAAA 16
Tal1_Gata1_MA0140.1 JASPAR - 78403087 78403104 5.0E-06 TTTTTTTAAGCAGATAAC 18
V_SRF_Q5_02_M01007 TRANSFAC - 78403105 78403123 6.0E-06 CATGCCCTTTTGTGGCTTT 19
V_TBP_06_M02814 TRANSFAC - 78404099 78404114 1.0E-05 TGTTTTTAAAAAATTG 16
V_NKX32_02_M01482 TRANSFAC + 78403035 78403051 1.0E-05 ACAAAGCACTTAGCACA 17
V_ELF1_Q6_M00746 TRANSFAC + 78403152 78403163 7.0E-06 ATTTGAGGAAAA 12
V_HAND1E47_01_M00222 TRANSFAC - 78405873 78405888 8.0E-06 GTGGGTATCTGGCACT 16
V_NKX3A_02_M01383 TRANSFAC + 78403034 78403050 3.0E-06 TACAAAGCACTTAGCAC 17
V_TCF7_04_M02921 TRANSFAC + 78404101 78404115 3.0E-06 ATTTTTTAAAAACAC 15
V_SRF_06_M02916 TRANSFAC + 78403094 78403110 0.0E+00 GCTTAAAAAAAAAAGCC 17
V_SRF_06_M02916 TRANSFAC + 78403095 78403111 0.0E+00 CTTAAAAAAAAAAGCCA 17
V_VMAF_01_M00035 TRANSFAC + 78403027 78403045 1.0E-06 TAATGCTTACAAAGCACTT 19
V_ZID_01_M00085 TRANSFAC + 78404143 78404155 8.0E-06 TGGCTCCATTTCC 13
V_OTX1_01_M01366 TRANSFAC + 78403015 78403031 9.0E-06 TGTAAGGATTACTAATG 17
V_OCT4_01_M01125 TRANSFAC - 78403090 78403104 7.0E-06 TTTTTTTAAGCAGAT 15
V_OTX3_01_M01403 TRANSFAC + 78403014 78403030 9.0E-06 TTGTAAGGATTACTAAT 17
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL