Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SCT Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6343 secretin chr11 - 626673 - 632173 627173 Transcription Factor Binding Sites   Download all TFBS in the SCT promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 631007 631024 8.0E-06 TATGTAAATGTTCACAGC 18 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 628492 628509 7.0E-06 ATATTTAACACATAATTA 18 ZNF713_C2H2_full_monomeric_17_1 SELEX - 628584 628600 1.0E-06 AAACAAAAAGCCACAAA 17 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 629369 629380 2.0E-06 GTTAAAAATAGC 12 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 631016 631024 3.0E-06 TATGTAAAT 9 POU2F3_POU_DBD_monomeric_9_1 SELEX - 631016 631024 4.0E-06 TATGTAAAT 9 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 629369 629380 1.0E-06 GTTAAAAATAGC 12 XBP1_bZIP_DBD_dimeric_12_1 SELEX + 624122 624133 0.0E+00 GCTGACGTCATC 12 XBP1_bZIP_DBD_dimeric_12_1 SELEX - 624122 624133 0.0E+00 GATGACGTCAGC 12 POU2F2_POU_DBD_monomeric_11_1 SELEX - 629477 629487 6.0E-06 ACATGCAAATG 11 POU2F2_POU_DBD_monomeric_11_1 SELEX - 631015 631025 5.0E-06 GTATGTAAATG 11 Creb5_bZIP_DBD_dimeric_12_1 SELEX + 624122 624133 5.0E-06 GCTGACGTCATC 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX - 624122 624133 7.0E-06 GATGACGTCAGC 12 POU3F4_POU_DBD_monomeric_9_1 SELEX - 631016 631024 4.0E-06 TATGTAAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 631016 631024 5.0E-06 TATGTAAAT 9 TCF7L1_HMG_full_monomeric_12_1 SELEX - 628752 628763 2.0E-06 GAACATCAAAGG 12 JDP2_bZIP_full_dimeric_12_1 SELEX + 624122 624133 2.0E-06 GCTGACGTCATC 12 JDP2_bZIP_full_dimeric_12_1 SELEX - 624122 624133 2.0E-06 GATGACGTCAGC 12 LEF1_HMG_DBD_monomeric_15_1 SELEX - 628749 628763 1.0E-06 GAACATCAAAGGGCT 15 MEF2B_MADS_full_dimeric_12_1 SELEX - 629369 629380 3.0E-06 GTTAAAAATAGC 12 POU3F3_POU_DBD_monomeric_13_1 SELEX - 631014 631026 6.0E-06 TGTATGTAAATGT 13 MEF2A_MA0052.1 JASPAR + 629370 629379 3.0E-06 CTATTTTTAA 10 ATF7_bZIP_DBD_dimeric_14_1 SELEX + 624121 624134 5.0E-06 AGCTGACGTCATCA 14 ATF7_bZIP_DBD_dimeric_14_1 SELEX - 624121 624134 5.0E-06 TGATGACGTCAGCT 14 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX - 628283 628294 7.0E-06 GTTCCCCACAAA 12 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX + 628490 628499 5.0E-06 AGTAATTATG 10 CREB3_bZIP_full_dimeric_14_1 SELEX + 624121 624134 1.0E-06 AGCTGACGTCATCA 14 CREB3_bZIP_full_dimeric_14_1 SELEX - 624121 624134 3.0E-06 TGATGACGTCAGCT 14 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 628752 628763 0.0E+00 GAACATCAAAGG 12 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 628492 628509 8.0E-06 ATATTTAACACATAATTA 18 POU3F1_POU_DBD_monomeric_12_1 SELEX - 631014 631025 5.0E-06 GTATGTAAATGT 12 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 631009 631022 7.0E-06 TGTGAACATTTACA 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 631009 631022 1.0E-05 TGTAAATGTTCACA 14 MTF1_C2H2_DBD_monomeric_14_1 SELEX + 628415 628428 2.0E-06 TGTGCAAACGGCGC 14 POU2F1_POU_DBD_monomeric_12_1 SELEX - 629477 629488 4.0E-06 AACATGCAAATG 12 POU2F1_POU_DBD_monomeric_12_1 SELEX - 631015 631026 7.0E-06 TGTATGTAAATG 12 TBX20_TBX_DBD_monomeric_15_1 SELEX + 628493 628507 9.0E-06 AATTATGTGTTAAAT 15 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 628284 628294 5.0E-06 GTTCCCCACAA 11 Mafb_bZIP_DBD_dimeric_18_1 SELEX + 624119 624136 1.0E-06 CTAGCTGACGTCATCAAA 18 Mafb_bZIP_DBD_dimeric_18_1 SELEX - 624119 624136 0.0E+00 TTTGATGACGTCAGCTAG 18 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX - 628281 628294 5.0E-06 GTTCCCCACAAAAG 14 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 628283 628294 6.0E-06 GTTCCCCACAAA 12 POU3F2_POU_DBD_monomeric_12_1 SELEX - 631014 631025 6.0E-06 GTATGTAAATGT 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 628492 628509 4.0E-06 ATATTTAACACATAATTA 18 BATF3_bZIP_DBD_dimeric_14_1 SELEX + 624121 624134 0.0E+00 AGCTGACGTCATCA 14 BATF3_bZIP_DBD_dimeric_14_1 SELEX - 624121 624134 0.0E+00 TGATGACGTCAGCT 14 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 631014 631024 8.0E-06 TATGTAAATGT 11 Zfx_MA0146.1 JASPAR + 628245 628258 1.0E-06 GCCGCCGCGGCCTG 14 V_MTF1_01_M01242 TRANSFAC + 628827 628846 4.0E-06 GTTTGCATCATTTCACAGCC 20 V_FOXP1_01_M00987 TRANSFAC + 628581 628600 9.0E-06 TACTTTGTGGCTTTTTGTTT 20 V_TCF3_01_M01594 TRANSFAC + 628752 628764 3.0E-06 CCTTTGATGTTCT 13 V_LEF1_04_M02774 TRANSFAC + 628748 628764 1.0E-06 AAGCCCTTTGATGTTCT 17 V_MEQCJUN_02_M02048 TRANSFAC + 624122 624132 2.0E-06 GCTGACGTCAT 11 V_MEQCJUN_02_M02048 TRANSFAC - 624123 624133 5.0E-06 GATGACGTCAG 11 V_TBX15_01_M01263 TRANSFAC + 631027 631045 8.0E-06 AGCTTTTATTTGAACACCT 19 V_TBX15_01_M01263 TRANSFAC - 631027 631045 8.0E-06 AGGTGTTCAAATAAAAGCT 19 V_ZFX_01_M01593 TRANSFAC - 628246 628261 0.0E+00 GGCCAGGCCGCGGCGG 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 630983 630994 1.0E-06 AATATACAAAAG 12 V_CREB_Q4_M00178 TRANSFAC + 624122 624133 3.0E-06 GCTGACGTCATC 12 V_TCF4_Q5_01_M02033 TRANSFAC - 628750 628759 4.0E-06 ATCAAAGGGC 10 V_HOXA13_02_M01297 TRANSFAC - 631029 631037 9.0E-06 AAATAAAAG 9 V_FOXJ2_02_M00423 TRANSFAC + 628807 628820 1.0E-06 GCCACAATATTTTC 14 V_CREB_Q4_01_M00917 TRANSFAC - 624124 624134 5.0E-06 TGATGACGTCA 11 V_MEF2_02_M00231 TRANSFAC - 629365 629386 2.0E-06 CTGAAGGTTAAAAATAGCGACT 22 V_POU2F3_01_M01476 TRANSFAC - 629474 629489 6.0E-06 CAACATGCAAATGGAA 16 V_POU2F3_01_M01476 TRANSFAC - 631012 631027 1.0E-06 TTGTATGTAAATGTTC 16 V_POU1F1_Q6_M00744 TRANSFAC - 628711 628720 1.0E-06 ATGTATAAAT 10 V_ATF3_Q6_01_M01863 TRANSFAC - 624122 624132 1.0E-06 ATGACGTCAGC 11 V_FOXJ1_03_M02750 TRANSFAC - 630981 630996 6.0E-06 ACAATATACAAAAGGG 16 V_JUNDM2_03_M02772 TRANSFAC + 624120 624135 1.0E-06 TAGCTGACGTCATCAA 16 V_JUNDM2_03_M02772 TRANSFAC - 624120 624135 6.0E-06 TTGATGACGTCAGCTA 16 V_HOXC6_01_M01406 TRANSFAC + 628487 628503 7.0E-06 CAGAGTAATTATGTGTT 17 V_PITX2_Q6_M02114 TRANSFAC - 629165 629174 1.0E-06 TGTAATCCCA 10 V_HNF4A_04_M02764 TRANSFAC + 625110 625126 7.0E-06 GTGCAGGGGTCAACCAG 17 V_NKX62_Q2_M00489 TRANSFAC + 628499 628510 7.0E-06 GTGTTAAATATT 12 V_MEF2A_Q6_M02024 TRANSFAC + 629371 629380 1.0E-06 TATTTTTAAC 10 V_ELF4_04_M02850 TRANSFAC - 631025 631041 8.0E-06 GTTCAAATAAAAGCTTG 17 V_TCF3_04_M02816 TRANSFAC - 628748 628764 3.0E-06 AGAACATCAAAGGGCTT 17 V_PAX9_B_M00329 TRANSFAC - 628327 628350 7.0E-06 GATGCCCACAGATGAGCGGACGCG 24 V_RSRFC4_Q2_M00407 TRANSFAC - 629366 629382 7.0E-06 AGGTTAAAAATAGCGAC 17 V_AMEF2_Q6_M00403 TRANSFAC - 629366 629383 7.0E-06 AAGGTTAAAAATAGCGAC 18 V_NFKB_Q6_M00194 TRANSFAC + 628265 628278 3.0E-06 GTGGGAATCTCCTT 14 V_E47_02_M00071 TRANSFAC - 631036 631051 5.0E-06 GAAGACAGGTGTTCAA 16 V_NKX22_02_M01372 TRANSFAC - 628689 628705 2.0E-06 ACAGACACTTGAGAACA 17 V_PAX5_01_M00143 TRANSFAC + 628666 628693 1.0E-05 CTAATGGCCAGCGATGTGGAGCATGTTC 28 V_MEF2_03_M00232 TRANSFAC - 629365 629386 1.0E-05 CTGAAGGTTAAAAATAGCGACT 22 V_ISRE_01_M00258 TRANSFAC - 624100 624114 6.0E-06 TGGTTTCAAATTCCA 15 V_OCT1_04_M00138 TRANSFAC - 631009 631031 7.0E-06 AAGCTTGTATGTAAATGTTCACA 23 V_GR_01_M00955 TRANSFAC + 628674 628700 9.0E-06 CAGCGATGTGGAGCATGTTCTCAAGTG 27 V_TCF7_03_M02817 TRANSFAC - 628748 628764 3.0E-06 AGAACATCAAAGGGCTT 17 V_PBX1_05_M01967 TRANSFAC + 628650 628663 1.0E-06 TTTGATTGGCATCT 14 V_STAT3_03_M01595 TRANSFAC - 628527 628542 3.0E-06 GCTGCTGGGAAGACAG 16 V_OCT1_B_M00342 TRANSFAC - 629477 629486 5.0E-06 CATGCAAATG 10 V_OCT_Q6_M00795 TRANSFAC + 631014 631024 6.0E-06 ACATTTACATA 11 V_NEUROD_02_M01288 TRANSFAC - 624231 624242 5.0E-06 CAGCTGCTGTGT 12 V_CREM_Q6_M01820 TRANSFAC - 624121 624131 1.0E-05 TGACGTCAGCT 11 V_CREM_Q6_M01820 TRANSFAC + 624124 624134 4.0E-06 TGACGTCATCA 11 V_VJUN_01_M00036 TRANSFAC - 624120 624135 1.0E-06 TTGATGACGTCAGCTA 16 V_AML2_Q3_01_M01854 TRANSFAC + 624112 624122 6.0E-06 CCACACCCTAG 11 V_LEF1_Q2_01_M01022 TRANSFAC - 628751 628760 3.0E-06 CATCAAAGGG 10 V_TTF1_Q5_M02034 TRANSFAC - 628690 628703 3.0E-06 AGACACTTGAGAAC 14 V_EOMES_04_M02851 TRANSFAC - 629398 629413 4.0E-06 AAGGAGGTGTTGCCGC 16 V_OCT2_01_M01368 TRANSFAC - 629474 629489 5.0E-06 CAACATGCAAATGGAA 16 V_OCT2_01_M01368 TRANSFAC - 631012 631027 2.0E-06 TTGTATGTAAATGTTC 16 V_LUN1_01_M00480 TRANSFAC - 629153 629169 3.0E-06 TCCCAGCTACTTGGAGG 17 V_ATF1_03_M02738 TRANSFAC + 624120 624135 1.0E-06 TAGCTGACGTCATCAA 16 V_ATF1_03_M02738 TRANSFAC - 624120 624135 1.0E-06 TTGATGACGTCAGCTA 16 V_ATF2_Q5_M01862 TRANSFAC + 624121 624132 1.0E-06 AGCTGACGTCAT 12 V_DMRT7_01_M01151 TRANSFAC + 628577 628590 5.0E-06 TTGCTACTTTGTGG 14 V_NRF2_Q4_M00821 TRANSFAC - 624227 624239 7.0E-06 CTGCTGTGTCAGA 13 V_PITX2_Q2_M00482 TRANSFAC - 629164 629174 1.0E-06 TGTAATCCCAG 11 V_RSRFC4_01_M00026 TRANSFAC + 629367 629382 2.0E-06 TCGCTATTTTTAACCT 16 V_OCT1_06_M00162 TRANSFAC + 631013 631026 7.0E-06 AACATTTACATACA 14 V_TITF1_Q3_M00432 TRANSFAC + 628692 628701 3.0E-06 TCTCAAGTGT 10 V_LEF1TCF1_Q4_M00978 TRANSFAC + 628752 628762 0.0E+00 CCTTTGATGTT 11 V_DLX3_02_M02051 TRANSFAC - 628491 628498 5.0E-06 ATAATTAC 8 V_ZIC3_04_M02837 TRANSFAC + 624086 624100 1.0E-06 CACCCTCGGGGGGGT 15 V_ZIC1_04_M02835 TRANSFAC + 624086 624099 3.0E-06 CACCCTCGGGGGGG 14 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 624109 624116 1.0E-05 TGTGGTTT 8 V_PPARG_02_M00515 TRANSFAC - 628284 628306 7.0E-06 CAGCGGGACACAGTTCCCCACAA 23 V_CREB_02_M00113 TRANSFAC - 624124 624135 0.0E+00 TTGATGACGTCA 12 V_TCF11MAFG_01_M00284 TRANSFAC + 628478 628499 3.0E-06 GCTGGGTGACAGAGTAATTATG 22 V_ZIC2_04_M02836 TRANSFAC + 624086 624100 3.0E-06 CACCCTCGGGGGGGT 15 V_DMRT1_01_M01146 TRANSFAC + 628577 628591 1.0E-06 TTGCTACTTTGTGGC 15 V_TCF4_01_M01705 TRANSFAC - 624130 624138 5.0E-06 TCTTTGATG 9 V_TCF4_01_M01705 TRANSFAC + 628752 628760 5.0E-06 CCTTTGATG 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.