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RXRG Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 6258 retinoid X receptor, gamma chr1 - 165414092 - 165419592 165414592 RXRG_nuclearreceptor_DBD_dimeric_14_2 RXRG_nuclearreceptor_full_dimeric_14_1 RXRG_nuclearreceptor_full_dimeric_14_2 Transcription Factor Binding Sites   Download all TFBS in the RXRG promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 165413584 165413601 7.0E-06 CCAATTAAAGGGAAATCT 18 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 165418663 165418676 2.0E-06 GAATTAGCTAATTC 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 165418663 165418676 2.0E-06 GAATTAGCTAATTC 14 SOX8_HMG_DBD_dimeric_14_1 SELEX + 165413373 165413386 9.0E-06 TGAATCTTCAGTTT 14 SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 165413207 165413219 9.0E-06 AAGCAACAGCTGA 13 SP1_MA0079.2 JASPAR - 165414745 165414754 9.0E-06 CCCCTCCTCC 10 Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 165414354 165414363 9.0E-06 ACCAGCTGCT 10 NFIX_NFI_full_monomeric_9_2 SELEX + 165413384 165413392 8.0E-06 TTTGCCAAT 9 Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 165418595 165418608 1.0E-05 GTAACAGCTGGAGA 14 SOX15_HMG_full_dimeric_15_1 SELEX - 165414908 165414922 8.0E-06 CAAACTCCCATTGTT 15 SP1_C2H2_DBD_monomeric_11_1 SELEX - 165414751 165414761 7.0E-06 ACCCCACCCCC 11 EGR4_C2H2_DBD_monomeric_16_2 SELEX - 165413284 165413299 2.0E-06 TAACGCCCAAGCACAT 16 Hltf_MA0109.1 JASPAR + 165413106 165413115 4.0E-06 AACCTTATAA 10 DUXA_homeodomain_DBD_dimeric_13_1 SELEX - 165414465 165414477 2.0E-06 CTGAGTTAATCAA 13 TFAP4_bHLH_full_dimeric_10_1 SELEX - 165413206 165413215 5.0E-06 AACAGCTGAC 10 Pou5f1_MA0142.1 JASPAR - 165413505 165413519 0.0E+00 CTTTGATTTGCTAAT 15 Myf_MA0055.1 JASPAR - 165413208 165413219 0.0E+00 AAGCAACAGCTG 12 Myf_MA0055.1 JASPAR + 165414350 165414361 5.0E-06 CGGCAGCAGCTG 12 Myf_MA0055.1 JASPAR + 165414353 165414364 2.0E-06 CAGCAGCTGGTG 12 Myf_MA0055.1 JASPAR - 165414353 165414364 8.0E-06 CACCAGCTGCTG 12 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 165413503 165413516 9.0E-06 CTATTAGCAAATCA 14 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 165418663 165418676 2.0E-06 GAATTAGCTAATTC 14 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 165418663 165418676 2.0E-06 GAATTAGCTAATTC 14 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 165413584 165413601 9.0E-06 CCAATTAAAGGGAAATCT 18 Sox2_MA0143.1 JASPAR - 165413506 165413520 1.0E-06 CCTTTGATTTGCTAA 15 V_DMRT4_01_M01149 TRANSFAC + 165413544 165413556 3.0E-06 ACAGTAGCAAATT 13 V_RUSH1A_02_M01107 TRANSFAC + 165413106 165413115 4.0E-06 AACCTTATAA 10 V_OSR1_03_M02784 TRANSFAC + 165413540 165413555 0.0E+00 AAACACAGTAGCAAAT 16 V_MSX3_01_M01341 TRANSFAC + 165413579 165413594 3.0E-06 AAAATCCAATTAAAGG 16 V_TCF3_01_M01594 TRANSFAC + 165410979 165410991 7.0E-06 GCTTTGTTTTGCC 13 V_TCF3_01_M01594 TRANSFAC - 165413508 165413520 0.0E+00 CCTTTGATTTGCT 13 V_ALX4_01_M00619 TRANSFAC + 165415386 165415398 7.0E-06 CCTGAGATTGATC 13 V_TCF4_Q5_01_M02033 TRANSFAC + 165413513 165413522 1.0E-06 ATCAAAGGAA 10 V_POU5F1_02_M02245 TRANSFAC - 165413505 165413519 0.0E+00 CTTTGATTTGCTAAT 15 V_LBX2_01_M01401 TRANSFAC + 165413580 165413596 9.0E-06 AAATCCAATTAAAGGGA 17 V_FOXJ1_04_M02854 TRANSFAC - 165410813 165410827 4.0E-06 TCCTCATAACAACCC 15 V_IRF_Q6_01_M00972 TRANSFAC - 165413092 165413102 3.0E-06 AAAATTGAAAA 11 V_CEBP_C_M00201 TRANSFAC + 165418662 165418679 4.0E-06 GGAATTAGCTAATTCATT 18 V_RP58_01_M00532 TRANSFAC - 165413279 165413290 9.0E-06 AGCACATCTGTC 12 V_GLI1_01_M01702 TRANSFAC - 165414876 165414886 8.0E-06 GGCCACCCAAG 11 V_SP1_03_M02281 TRANSFAC - 165414745 165414754 9.0E-06 CCCCTCCTCC 10 V_PITX2_Q6_M02114 TRANSFAC - 165414285 165414294 9.0E-06 ACTAATCCCA 10 V_HEN1_01_M00068 TRANSFAC - 165414348 165414369 4.0E-06 ACAGGCACCAGCTGCTGCCGCC 22 V_AP4_Q6_02_M01860 TRANSFAC - 165414350 165414362 4.0E-06 CCAGCTGCTGCCG 13 V_AP4_Q6_01_M00927 TRANSFAC - 165414355 165414363 6.0E-06 ACCAGCTGC 9 V_MYBL1_04_M02884 TRANSFAC + 165413177 165413191 6.0E-06 CCTCCAACTGACAAG 15 V_CEBPB_01_M00109 TRANSFAC - 165413097 165413110 8.0E-06 AGGTTTTGAAAATT 14 V_BCL6_02_M01185 TRANSFAC + 165414208 165414221 4.0E-06 GGCTTTCTTCAACT 14 V_NFY_C_M00209 TRANSFAC - 165413505 165413518 5.0E-06 TTTGATTTGCTAAT 14 V_LHX61_01_M01314 TRANSFAC - 165414461 165414477 9.0E-06 CTGAGTTAATCAAACTA 17 V_TAL1_Q6_M00993 TRANSFAC + 165418597 165418606 7.0E-06 TCCAGCTGTT 10 V_GLI3_02_M01704 TRANSFAC - 165414876 165414886 6.0E-06 GGCCACCCAAG 11 V_CRX_Q4_M00623 TRANSFAC - 165414284 165414296 3.0E-06 TGACTAATCCCAG 13 V_PR_Q2_M00960 TRANSFAC + 165414766 165414775 7.0E-06 GAGAGAACAG 10 V_MYF_01_M01302 TRANSFAC - 165413208 165413219 0.0E+00 AAGCAACAGCTG 12 V_MYF_01_M01302 TRANSFAC + 165414350 165414361 5.0E-06 CGGCAGCAGCTG 12 V_MYF_01_M01302 TRANSFAC + 165414353 165414364 2.0E-06 CAGCAGCTGGTG 12 V_MYF_01_M01302 TRANSFAC - 165414353 165414364 8.0E-06 CACCAGCTGCTG 12 V_CEBPE_Q6_M01868 TRANSFAC - 165413024 165413037 2.0E-06 AAAGCTTGCCTAAC 14 V_GFI1_01_M00250 TRANSFAC - 165415379 165415402 4.0E-06 AGCAGATCAATCTCAGGATTTGCA 24 V_NKX61_01_M00424 TRANSFAC - 165413582 165413594 1.0E-06 CCTTTAATTGGAT 13 V_PAX4_05_M01385 TRANSFAC - 165418665 165418681 8.0E-06 TGAATGAATTAGCTAAT 17 V_PAX2_01_M00098 TRANSFAC + 165414371 165414389 3.0E-06 AGTAATCACGCATAATGCT 19 V_MATH1_Q2_M01716 TRANSFAC + 165414355 165414364 3.0E-06 GCAGCTGGTG 10 V_NKX52_01_M01315 TRANSFAC + 165413580 165413596 8.0E-06 AAATCCAATTAAAGGGA 17 V_ASCL2_03_M02737 TRANSFAC - 165414350 165414366 7.0E-06 GGCACCAGCTGCTGCCG 17 V_HBP1_03_M02762 TRANSFAC - 165418670 165418685 2.0E-06 CTTGTGAATGAATTAG 16 V_SP1SP3_Q4_M01219 TRANSFAC - 165414745 165414755 1.0E-05 CCCCCTCCTCC 11 V_AP4_Q5_M00175 TRANSFAC + 165413206 165413215 8.0E-06 GTCAGCTGTT 10 V_RREB1_01_M00257 TRANSFAC + 165413403 165413416 4.0E-06 CCCCAACCCCCCAT 14 V_STAT4_Q5_M02117 TRANSFAC + 165413110 165413119 9.0E-06 TTATAAGAAT 10 V_ARID3A_04_M02735 TRANSFAC - 165414460 165414476 7.0E-06 TGAGTTAATCAAACTAG 17 V_OCT4_02_M01124 TRANSFAC - 165413504 165413518 0.0E+00 TTTGATTTGCTAATA 15 V_SOX9_B1_M00410 TRANSFAC + 165414904 165414917 7.0E-06 CTCTAACAATGGGA 14 V_FOXO1_Q5_M01216 TRANSFAC - 165410981 165410989 8.0E-06 CAAAACAAA 9 V_E2_01_M00107 TRANSFAC + 165418500 165418515 7.0E-06 AGACCATTATTGGTAT 16 V_GLI2_01_M01703 TRANSFAC - 165414876 165414886 6.0E-06 GGCCACCCAAG 11 V_BARHL1_01_M01332 TRANSFAC + 165413579 165413594 6.0E-06 AAAATCCAATTAAAGG 16 V_FOXL1_02_M02857 TRANSFAC - 165410978 165410993 4.0E-06 ATGGCAAAACAAAGCC 16 V_HEN1_02_M00058 TRANSFAC + 165414348 165414369 5.0E-06 GGCGGCAGCAGCTGGTGCCTGT 22 V_HEN1_02_M00058 TRANSFAC - 165414348 165414369 4.0E-06 ACAGGCACCAGCTGCTGCCGCC 22 V_FOXJ3_06_M02855 TRANSFAC - 165410978 165410994 3.0E-06 GATGGCAAAACAAAGCC 17 V_PLAG1_01_M01778 TRANSFAC + 165413474 165413489 4.0E-06 GGGGCAGCAGCAGGGG 16 V_CPHX_01_M01478 TRANSFAC - 165414464 165414477 5.0E-06 CTGAGTTAATCAAA 14 V_PARP_Q3_M01211 TRANSFAC - 165418539 165418548 3.0E-06 TTAGAAATAC 10 V_CDP_01_M00095 TRANSFAC - 165418501 165418512 6.0E-06 CCAATAATGGTC 12 V_TFIIA_Q6_M00707 TRANSFAC - 165414776 165414787 8.0E-06 TCTGAAAGGGCC 12 V_DMRT7_01_M01151 TRANSFAC - 165413540 165413553 7.0E-06 TTGCTACTGTGTTT 14 V_OSR2_03_M02785 TRANSFAC + 165413540 165413555 0.0E+00 AAACACAGTAGCAAAT 16 V_PITX2_Q2_M00482 TRANSFAC - 165414284 165414294 8.0E-06 ACTAATCCCAG 11 V_ZFP281_01_M01597 TRANSFAC + 165414750 165414760 5.0E-06 AGGGGGTGGGG 11 V_IRF1_Q6_01_M01881 TRANSFAC + 165413090 165413103 9.0E-06 ACTTTTCAATTTTC 14 V_SOX2_01_M02246 TRANSFAC - 165413506 165413520 1.0E-06 CCTTTGATTTGCTAA 15 V_SOX18_04_M02905 TRANSFAC + 165413547 165413562 9.0E-06 GTAGCAAATTAAAGCA 16 V_SOX2_Q6_M01272 TRANSFAC + 165410975 165410990 9.0E-06 ACAGGCTTTGTTTTGC 16 V_IRF1_01_M00062 TRANSFAC - 165413091 165413103 4.0E-06 GAAAATTGAAAAG 13 V_BARHL2_01_M01446 TRANSFAC + 165413579 165413594 1.0E-05 AAAATCCAATTAAAGG 16 V_TAACC_B_M00331 TRANSFAC - 165413376 165413398 4.0E-06 TAGAGAATTGGCAAACTGAAGAT 23 V_PBX1_04_M01357 TRANSFAC - 165414726 165414742 8.0E-06 TCACAGATCAAATACCA 17 V_SMAD1_01_M01590 TRANSFAC - 165410978 165410989 9.0E-06 CAAAACAAAGCC 12 V_SOX9_Q4_M01284 TRANSFAC + 165413512 165413522 2.0E-06 AATCAAAGGAA 11 V_DMRT5_01_M01150 TRANSFAC - 165413541 165413555 2.0E-06 ATTTGCTACTGTGTT 15 V_NANOG_02_M01247 TRANSFAC - 165410974 165410993 8.0E-06 ATGGCAAAACAAAGCCTGTA 20 V_NANOG_02_M01247 TRANSFAC + 165413506 165413525 0.0E+00 TTAGCAAATCAAAGGAAAGA 20 V_OCT4_01_M01125 TRANSFAC - 165413505 165413519 2.0E-06 CTTTGATTTGCTAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.