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RPL12 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6136 ribosomal protein L12 chr9 - 130213211 - 130218711 130213711 Transcription Factor Binding Sites   Download all TFBS in the RPL12 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX21_HMG_DBD_dimeric_15_1 SELEX + 130210135 130210149 5.0E-06 AACAATGAAAATGTC 15 SOX21_HMG_DBD_dimeric_15_1 SELEX - 130210135 130210149 8.0E-06 GACATTTTCATTGTT 15 MESP1_bHLH_DBD_dimeric_10_1 SELEX - 130218032 130218041 4.0E-06 AACACCTGCT 10 SOX4_HMG_DBD_dimeric_16_1 SELEX - 130210135 130210150 2.0E-06 TGACATTTTCATTGTT 16 NFIA_NFI_full_dimeric_15_1 SELEX - 130215114 130215128 5.0E-06 ATGGCAATGAGCCAG 15 IRF7_IRF_DBD_dimeric_14_1 SELEX + 130212959 130212972 9.0E-06 CTTAAAGTGAAACA 14 SRY_HMG_DBD_dimeric_15_1 SELEX + 130210135 130210149 8.0E-06 AACAATGAAAATGTC 15 SRY_HMG_DBD_dimeric_15_1 SELEX - 130210135 130210149 1.0E-06 GACATTTTCATTGTT 15 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 130214704 130214714 1.0E-05 GCCCCGCCCCC 11 SOX2_HMG_full_dimeric_17_1 SELEX - 130210134 130210150 1.0E-06 TGACATTTTCATTGTTA 17 TBX1_TBX_DBD_dimeric_23_1 SELEX + 130213246 130213268 8.0E-06 ACTCACACCGGGGAGGCGTGGAG 23 TBX1_TBX_DBD_dimeric_23_1 SELEX + 130213876 130213898 3.0E-06 GTTCGCTCCGGAGAAGTCTGAGA 23 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 130213801 130213811 7.0E-06 CGCCTGAGGCT 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 130213801 130213811 3.0E-06 AGCCTCAGGCG 11 SOX8_HMG_full_dimeric_15_1 SELEX - 130210135 130210149 6.0E-06 GACATTTTCATTGTT 15 NFIX_NFI_full_dimeric_15_2 SELEX + 130215114 130215128 1.0E-06 CTGGCTCATTGCCAT 15 NFIX_NFI_full_dimeric_15_2 SELEX - 130215114 130215128 7.0E-06 ATGGCAATGAGCCAG 15 Sox17_HMG_DBD_dimeric_15_1 SELEX - 130210135 130210149 1.0E-06 GACATTTTCATTGTT 15 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 130213801 130213811 8.0E-06 CGCCTGAGGCT 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 130213801 130213811 3.0E-06 AGCCTCAGGCG 11 ZNF238_C2H2_full_monomeric_13_1 SELEX - 130212622 130212634 8.0E-06 TTTCCAGCTGTGT 13 ZNF238_C2H2_full_monomeric_13_1 SELEX + 130212704 130212716 0.0E+00 AATACAGATGTTG 13 Klf4_MA0039.2 JASPAR + 130214396 130214405 2.0E-06 TGGGTGTGGC 10 TCF7L1_HMG_full_monomeric_12_1 SELEX - 130213562 130213573 7.0E-06 CGAGATCAAAGT 12 TCF4_bHLH_full_dimeric_10_1 SELEX - 130218032 130218041 7.0E-06 AACACCTGCT 10 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX - 130214175 130214188 5.0E-06 ATCTCATAAAGTCA 14 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX - 130218108 130218121 1.0E-06 AAGTCATGAAGCCA 14 SP1_MA0079.2 JASPAR + 130214705 130214714 7.0E-06 CCCCGCCCCC 10 HIC2_C2H2_DBD_monomeric_9_1 SELEX + 130212683 130212691 4.0E-06 ATGCCCACT 9 SOX18_HMG_full_dimeric_15_1 SELEX + 130210135 130210149 4.0E-06 AACAATGAAAATGTC 15 SOX18_HMG_full_dimeric_15_1 SELEX - 130210135 130210149 1.0E-06 GACATTTTCATTGTT 15 SOX15_HMG_full_dimeric_15_1 SELEX - 130210135 130210149 5.0E-06 GACATTTTCATTGTT 15 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 130213562 130213573 6.0E-06 CGAGATCAAAGT 12 SOX7_HMG_full_dimeric_17_1 SELEX - 130210134 130210150 2.0E-06 TGACATTTTCATTGTTA 17 SCRT1_C2H2_DBD_monomeric_15_1 SELEX + 130213352 130213366 1.0E-05 CCGCCACAGGTGGTC 15 SOX14_HMG_DBD_dimeric_12_1 SELEX - 130210137 130210148 8.0E-06 ACATTTTCATTG 12 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 130214392 130214406 0.0E+00 GGCCACACCCATATT 15 FEV_MA0156.1 JASPAR + 130214387 130214394 1.0E-05 CAGGAAAT 8 TFAP2C_TFAP_full_dimeric_11_1 SELEX + 130213801 130213811 9.0E-06 CGCCTGAGGCT 11 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 130213801 130213811 4.0E-06 AGCCTCAGGCG 11 NFIB_NFI_full_dimeric_15_1 SELEX - 130215114 130215128 4.0E-06 ATGGCAATGAGCCAG 15 Myf_MA0055.1 JASPAR - 130212559 130212570 9.0E-06 GAGCAACTGCTG 12 TBX21_TBX_full_dimeric_19_1 SELEX + 130213248 130213266 2.0E-06 TCACACCGGGGAGGCGTGG 19 TFAP2A_MA0003.1 JASPAR - 130213328 130213336 8.0E-06 GCCCTAGGG 9 Sox11_HMG_DBD_dimeric_15_1 SELEX - 130210135 130210149 1.0E-06 GACATTTTCATTGTT 15 Sox3_HMG_DBD_dimeric_17_1 SELEX + 130210134 130210150 1.0E-06 TAACAATGAAAATGTCA 17 Sox3_HMG_DBD_dimeric_17_1 SELEX - 130210134 130210150 5.0E-06 TGACATTTTCATTGTTA 17 Sox1_HMG_DBD_dimeric_15_1 SELEX - 130210135 130210149 4.0E-06 GACATTTTCATTGTT 15 ELF5_MA0136.1 JASPAR - 130213642 130213650 9.0E-06 AACTTCCTT 9 ELF5_MA0136.1 JASPAR + 130218126 130218134 9.0E-06 AACTTCCTT 9 RARG_nuclearreceptor_full_dimeric_16_1 SELEX - 130217738 130217753 5.0E-06 AAGGGCAAAACGCCAC 16 BATF3_bZIP_DBD_dimeric_14_1 SELEX - 130210191 130210204 2.0E-06 TCATGACATCATCG 14 NFIA_NFI_full_monomeric_10_1 SELEX + 130215220 130215229 5.0E-06 TGTGCCAAGT 10 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 130213801 130213811 4.0E-06 CGCCTGAGGCT 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 130213801 130213811 4.0E-06 AGCCTCAGGCG 11 TCF3_bHLH_DBD_dimeric_10_1 SELEX - 130218032 130218041 2.0E-06 AACACCTGCT 10 ZIC1_C2H2_full_monomeric_14_1 SELEX - 130213353 130213366 9.0E-06 GACCACCTGTGGCG 14 ZIC1_C2H2_full_monomeric_14_1 SELEX + 130217727 130217740 2.0E-06 TGCCACCTGCTGTG 14 SOX9_HMG_full_dimeric_17_1 SELEX - 130210134 130210150 6.0E-06 TGACATTTTCATTGTTA 17 V_AP2ALPHA_01_M00469 TRANSFAC - 130213328 130213336 8.0E-06 GCCCTAGGG 9 V_ELF5_02_M01980 TRANSFAC + 130214386 130214395 3.0E-06 CCAGGAAATA 10 V_DMRT4_01_M01149 TRANSFAC + 130210130 130210142 5.0E-06 ACTGTAACAATGA 13 V_ELF5_03_M02057 TRANSFAC + 130212698 130212707 5.0E-06 CGAGGAAATA 10 V_ELF5_03_M02057 TRANSFAC + 130214386 130214395 2.0E-06 CCAGGAAATA 10 V_MEIS1BHOXA9_02_M00421 TRANSFAC - 130210137 130210150 1.0E-06 TGACATTTTCATTG 14 V_E2A_Q6_01_M02088 TRANSFAC - 130218030 130218042 3.0E-06 AAACACCTGCTGC 13 V_GAF_Q6_M01209 TRANSFAC + 130213935 130213945 3.0E-06 CATATTCCTTT 11 V_ZSCAN4_03_M02838 TRANSFAC - 130214065 130214081 4.0E-06 CTAAAGTGCACACAACA 17 V_YY1_02_M00069 TRANSFAC + 130214724 130214743 9.0E-06 GAGCTGCCATCTTTGCCCAT 20 V_HNF1_02_M01379 TRANSFAC - 130214075 130214091 7.0E-06 GTTTTGATAACTAAAGT 17 V_SOX30_03_M02804 TRANSFAC + 130210131 130210146 3.0E-06 CTGTAACAATGAAAAT 16 V_GM397_03_M02760 TRANSFAC - 130214065 130214081 3.0E-06 CTAAAGTGCACACAACA 17 V_GM397_03_M02760 TRANSFAC + 130214066 130214082 9.0E-06 GTTGTGTGCACTTTAGT 17 V_ESE1_01_M01977 TRANSFAC + 130214386 130214395 3.0E-06 CCAGGAAATA 10 V_SP1_Q6_01_M00931 TRANSFAC - 130213986 130213995 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 130214704 130214713 4.0E-06 GGGGCGGGGC 10 V_IRF2_Q6_M01882 TRANSFAC + 130212959 130212974 4.0E-06 CTTAAAGTGAAACAAA 16 V_HNF4_Q6_M00967 TRANSFAC - 130218070 130218078 7.0E-06 AAGGTCCAA 9 V_RP58_01_M00532 TRANSFAC - 130212706 130212717 3.0E-06 CCAACATCTGTA 12 V_AP4_Q6_M00176 TRANSFAC + 130212623 130212632 5.0E-06 CACAGCTGGA 10 V_YY1_Q6_M00793 TRANSFAC + 130214729 130214737 7.0E-06 GCCATCTTT 9 V_SP1_03_M02281 TRANSFAC + 130214705 130214714 7.0E-06 CCCCGCCCCC 10 V_JUNDM2_03_M02772 TRANSFAC + 130210190 130210205 5.0E-06 TCGATGATGTCATGAG 16 V_JUNDM2_03_M02772 TRANSFAC - 130210190 130210205 3.0E-06 CTCATGACATCATCGA 16 V_GKLF_02_M01588 TRANSFAC - 130214394 130214405 3.0E-06 GCCACACCCATA 12 V_NERF_Q2_M00531 TRANSFAC - 130212682 130212699 9.0E-06 CGTCAGGAAGTGGGCATG 18 V_SP1_02_M01303 TRANSFAC - 130214377 130214387 5.0E-06 GGGGTGGGGTG 11 V_E2A_Q2_M00804 TRANSFAC + 130214207 130214220 9.0E-06 GCACCTGCCTTTGA 14 V_E2A_Q2_M00804 TRANSFAC - 130218027 130218040 9.0E-06 ACACCTGCTGCAGG 14 V_GM497_04_M02864 TRANSFAC + 130208736 130208751 7.0E-06 CCAGGCACACACACCA 16 V_TCFAP2E_04_M02926 TRANSFAC + 130212973 130212986 4.0E-06 AATGTGAAAAAAAT 14 V_HOXC13_01_M01317 TRANSFAC - 130214175 130214190 5.0E-06 GAATCTCATAAAGTCA 16 V_TRF1_01_M01237 TRANSFAC - 130213319 130213333 3.0E-06 CTAGGGTAAGGCTTG 15 V_GC_01_M00255 TRANSFAC - 130214702 130214715 3.0E-06 CGGGGGCGGGGCTG 14 V_MYF_01_M01302 TRANSFAC - 130212559 130212570 9.0E-06 GAGCAACTGCTG 12 V_FKLF_Q5_M01837 TRANSFAC + 130214487 130214496 2.0E-06 GGGGTGGGAG 10 V_HNF3G_Q4_M02015 TRANSFAC + 130213784 130213791 7.0E-06 TGTTTGTT 8 V_E12_Q6_M00693 TRANSFAC - 130217727 130217737 8.0E-06 AGCAGGTGGCA 11 V_RFX1_01_M00280 TRANSFAC + 130212057 130212073 1.0E-06 TTCTCACTTGGCAACAA 17 V_ZBP89_Q4_M01816 TRANSFAC - 130214604 130214613 4.0E-06 CCCTCCCCCA 10 V_SP1_Q6_M00196 TRANSFAC - 130213985 130213997 2.0E-06 GAGGGGCGGGGCT 13 V_SP1_Q6_M00196 TRANSFAC - 130214703 130214715 2.0E-06 CGGGGGCGGGGCT 13 V_IRF3_Q3_M01279 TRANSFAC - 130212962 130212974 1.0E-06 TTTGTTTCACTTT 13 V_IRF3_Q3_M01279 TRANSFAC - 130212973 130212985 9.0E-06 TTTTTTTCACATT 13 V_MAZ_Q6_01_M02023 TRANSFAC - 130213374 130213387 2.0E-06 GTAGGTGGGGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 130214481 130214494 5.0E-06 CGGGGAGGGGTGGG 14 V_AP2BETA_Q3_M01858 TRANSFAC + 130210905 130210920 4.0E-06 GCGGGTGGCTGAGGGC 16 V_RFX4_04_M02893 TRANSFAC + 130214951 130214965 4.0E-06 TAGCATGGTTACTCA 15 V_IRF_Q6_M00772 TRANSFAC + 130214190 130214204 5.0E-06 CTGAGTTTCTGTTCC 15 V_SOX_Q6_M01014 TRANSFAC - 130210131 130210143 9.0E-06 TTCATTGTTACAG 13 V_HNF1_Q6_01_M01011 TRANSFAC - 130215323 130215343 1.0E-05 AGTAGATGCTTATTAAGTTCA 21 V_NKX22_02_M01372 TRANSFAC - 130212080 130212096 7.0E-06 TTAGGTACTTGAGATAG 17 V_SOX18_03_M02801 TRANSFAC - 130210129 130210144 6.0E-06 TTTCATTGTTACAGTA 16 V_EHF_02_M01974 TRANSFAC + 130214386 130214395 3.0E-06 CCAGGAAATA 10 V_ISRE_01_M00258 TRANSFAC + 130214192 130214206 2.0E-06 GAGTTTCTGTTCCCA 15 V_ELF5_01_M01197 TRANSFAC - 130218126 130218136 1.0E-06 TTAAGGAAGTT 11 V_REX1_03_M01744 TRANSFAC + 130210204 130210215 4.0E-06 AGGATGGCGGCC 12 V_REX1_03_M01744 TRANSFAC - 130214725 130214736 7.0E-06 AAGATGGCAGCT 12 V_TEL2_Q6_M00678 TRANSFAC + 130212687 130212696 6.0E-06 CCACTTCCTG 10 V_ZIC3_05_M02941 TRANSFAC + 130212565 130212579 8.0E-06 TTGCTCAGCAGGCAT 15 V_KLF7_03_M02773 TRANSFAC - 130214393 130214408 6.0E-06 AGGGCCACACCCATAT 16 V_ATF3_Q6_M00513 TRANSFAC - 130210191 130210204 7.0E-06 TCATGACATCATCG 14 V_SOX11_03_M02795 TRANSFAC + 130210130 130210146 6.0E-06 ACTGTAACAATGAAAAT 17 V_NKX23_01_M01457 TRANSFAC + 130212083 130212098 2.0E-06 TCTCAAGTACCTAAGG 16 V_NKX23_01_M01457 TRANSFAC - 130212083 130212098 2.0E-06 CCTTAGGTACTTGAGA 16 V_HOXD9_Q2_M01834 TRANSFAC - 130210258 130210267 8.0E-06 AACCATTAAA 10 V_TFIII_Q6_M00706 TRANSFAC + 130214435 130214443 6.0E-06 AGAGGGAGG 9 V_NEUROD_02_M01288 TRANSFAC - 130212622 130212633 2.0E-06 TTCCAGCTGTGT 12 V_GR_Q6_02_M01836 TRANSFAC - 130212536 130212548 6.0E-06 CATTCTGTCCTCT 13 V_SP4_Q5_M01273 TRANSFAC + 130213986 130213996 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC + 130214704 130214714 1.0E-06 GCCCCGCCCCC 11 V_EHF_03_M02052 TRANSFAC + 130214386 130214395 7.0E-06 CCAGGAAATA 10 V_SOX15_03_M02799 TRANSFAC + 130210130 130210146 9.0E-06 ACTGTAACAATGAAAAT 17 V_ZFP187_04_M02934 TRANSFAC + 130217746 130217761 2.0E-06 TTGCCCTTGTTCACCT 16 V_MTF1_06_M02882 TRANSFAC + 130212972 130212985 1.0E-06 AAATGTGAAAAAAA 14 V_LEF1_Q2_01_M01022 TRANSFAC - 130213561 130213570 8.0E-06 GATCAAAGTC 10 V_FAC1_01_M00456 TRANSFAC - 130213784 130213797 2.0E-06 GCCCACAACAAACA 14 V_TAL1_01_M01591 TRANSFAC - 130214972 130214984 4.0E-06 TTTCCTCATCTGT 13 V_MYOD_Q6_01_M00929 TRANSFAC - 130217724 130217741 5.0E-06 CCACAGCAGGTGGCAGTG 18 V_CAAT_C_M00200 TRANSFAC - 130214544 130214568 1.0E-06 CCCAATCACTAACCCTCTTGCACCC 25 V_LUN1_01_M00480 TRANSFAC - 130212857 130212873 2.0E-06 TACTAGGTACCTTAGGA 17 V_GFI1B_01_M01058 TRANSFAC + 130212107 130212118 9.0E-06 TCAATCAGAGCA 12 V_BDP1_01_M01796 TRANSFAC + 130215041 130215052 4.0E-06 GGATTCAAACCC 12 V_FPM315_01_M01587 TRANSFAC - 130213215 130213226 3.0E-06 GAGGGAGGAGCG 12 V_FPM315_01_M01587 TRANSFAC - 130214046 130214057 4.0E-06 GAGGGAGCAGGG 12 V_TCF4_Q5_M00671 TRANSFAC + 130214214 130214221 1.0E-05 CCTTTGAA 8 V_PITX2_Q2_M00482 TRANSFAC + 130215061 130215071 7.0E-06 TTTCATCCCAA 11 V_E47_01_M00002 TRANSFAC - 130217725 130217739 8.0E-06 ACAGCAGGTGGCAGT 15 V_E47_01_M00002 TRANSFAC + 130218030 130218044 3.0E-06 GCAGCAGGTGTTTTC 15 V_TBP_04_M02918 TRANSFAC - 130210252 130210266 1.0E-06 ACCATTAAAGAGATC 15 V_ESE1_02_M02055 TRANSFAC + 130214386 130214395 3.0E-06 CCAGGAAATA 10 V_MEF3_B_M00319 TRANSFAC - 130212040 130212052 5.0E-06 TGGGCAGGTTTCA 13 V_LEF1TCF1_Q4_M00978 TRANSFAC - 130212066 130212076 1.0E-05 CCTTTGTTGCC 11 V_LEF1TCF1_Q4_M00978 TRANSFAC + 130213562 130213572 3.0E-06 ACTTTGATCTC 11 V_IRF1_Q6_01_M01881 TRANSFAC - 130212960 130212973 6.0E-06 TTGTTTCACTTTAA 14 V_SREBP1_02_M00221 TRANSFAC - 130214648 130214658 1.0E-06 TGTCACCCCAC 11 V_SOX4_01_M01308 TRANSFAC + 130212069 130212076 1.0E-05 AACAAAGG 8 V_RFX3_04_M02788 TRANSFAC + 130212056 130212078 5.0E-06 CTTCTCACTTGGCAACAAAGGAA 23 V_CTF1_01_M01196 TRANSFAC - 130215114 130215127 4.0E-06 TGGCAATGAGCCAG 14 V_CTF1_01_M01196 TRANSFAC + 130215115 130215128 6.0E-06 TGGCTCATTGCCAT 14 V_SP1_Q2_01_M00933 TRANSFAC + 130213987 130213996 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC + 130214705 130214714 4.0E-06 CCCCGCCCCC 10 V_ELF5_04_M02241 TRANSFAC - 130213642 130213650 9.0E-06 AACTTCCTT 9 V_ELF5_04_M02241 TRANSFAC + 130218126 130218134 9.0E-06 AACTTCCTT 9 V_GATA1_02_M00126 TRANSFAC + 130218043 130218056 8.0E-06 TCACAGATAGGAGA 14 V_SP1_Q4_01_M00932 TRANSFAC - 130213985 130213997 3.0E-06 GAGGGGCGGGGCT 13 V_SP1_Q4_01_M00932 TRANSFAC - 130214703 130214715 2.0E-06 CGGGGGCGGGGCT 13 V_BRF1_01_M01747 TRANSFAC - 130215040 130215052 5.0E-06 GGGTTTGAATCCG 13 TLX1_NFIC_MA0119.1 JASPAR - 130215114 130215127 4.0E-06 TGGCAATGAGCCAG 14 TLX1_NFIC_MA0119.1 JASPAR + 130215115 130215128 6.0E-06 TGGCTCATTGCCAT 14 V_FEV_01_M02269 TRANSFAC + 130214387 130214394 1.0E-05 CAGGAAAT 8 V_DEC_Q1_M00997 TRANSFAC + 130217776 130217788 4.0E-06 CCTCACGTGAATG 13 V_DMRT1_01_M01146 TRANSFAC + 130214824 130214838 9.0E-06 CTGAATCAATGTTGC 15 V_DTYPEPA_B_M00334 TRANSFAC - 130210257 130210266 3.0E-06 ACCATTAAAG 10 V_SOX9_Q4_M01284 TRANSFAC + 130212068 130212078 6.0E-06 CAACAAAGGAA 11 V_ZIC1_05_M02939 TRANSFAC + 130212565 130212579 7.0E-06 TTGCTCAGCAGGCAT 15 V_ZIC1_05_M02939 TRANSFAC + 130212620 130212634 8.0E-06 CAACACAGCTGGAAA 15 V_ESE1_Q3_M01214 TRANSFAC + 130214386 130214395 3.0E-06 CCAGGAAATA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.