Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

DEFB136 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 613210 defensin, beta 136 chr8 - 11831608 - 11837108 11832108 Transcription Factor Binding Sites   Download all TFBS in the DEFB136 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints EBF1_EBF_full_dimeric_14_1 SELEX + 11835782 11835795 4.0E-06 TTTCCCCAGGGAGT 14 EBF1_EBF_full_dimeric_14_1 SELEX - 11835782 11835795 3.0E-06 ACTCCCTGGGGAAA 14 EWSR1-FLI1_MA0149.1 JASPAR + 11828223 11828240 2.0E-06 GGAAAGAAGGCAGGGAAT 18 E2F7_E2F_DBD_dimeric_14_1 SELEX + 11836181 11836194 8.0E-06 TTTTCCCAGCAAAT 14 T_MA0009.1 JASPAR + 11836304 11836314 7.0E-06 CTAGGTGTAAT 11 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX - 11828160 11828171 4.0E-06 TATCCCCACAAA 12 CTCF_C2H2_full_monomeric_17_1 SELEX - 11828185 11828201 3.0E-06 AGCGCCACCTGTCGGAT 17 MAFK_bZIP_full_monomeric_12_1 SELEX + 11835812 11835823 7.0E-06 TAAAGTGCTGAG 12 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX - 11828158 11828171 5.0E-06 TATCCCCACAAAAT 14 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 11828160 11828171 6.0E-06 TATCCCCACAAA 12 TBX1_TBX_DBD_dimeric_20_1 SELEX - 11831735 11831754 4.0E-06 AGTTGTGATAAGAGGTGAGG 20 V_HSF2_01_M00147 TRANSFAC - 11835262 11835271 5.0E-06 AGAATTTTCT 10 V_EBF_Q6_M00977 TRANSFAC + 11835783 11835793 5.0E-06 TTCCCCAGGGA 11 V_ALX4_01_M00619 TRANSFAC - 11835263 11835275 7.0E-06 CCTGAGAATTTTC 13 V_STAT3STAT3_Q3_M01220 TRANSFAC - 11836179 11836192 1.0E-06 TTGCTGGGAAAAGG 14 V_COE1_Q6_M01871 TRANSFAC - 11836048 11836061 2.0E-06 TCTCAAGGGCATTG 14 V_SOX11_04_M02899 TRANSFAC - 11836311 11836324 1.0E-05 AAAATTGTGAATTA 14 V_GABPA_04_M02858 TRANSFAC - 11828217 11828232 3.0E-06 CCTTCTTTCCCCCGAC 16 V_PU1_Q4_M01172 TRANSFAC + 11836318 11836336 5.0E-06 CAATTTTGGTTCTTTTTTT 19 V_TCFAP2E_04_M02926 TRANSFAC - 11836328 11836341 8.0E-06 TCCAGAAAAAAAGA 14 V_TAL1_GATA1_01_M02243 TRANSFAC - 11831743 11831760 3.0E-06 TTGCTGAGTTGTGATAAG 18 V_ETS_Q4_M00771 TRANSFAC + 11836220 11836231 5.0E-06 ACCCACATCCTG 12 V_CP2_02_M00947 TRANSFAC + 11835838 11835852 8.0E-06 ACTGGGTTCAGCCAG 15 V_PR_Q2_M00960 TRANSFAC - 11836294 11836303 1.0E-06 GATAGAACAT 10 V_NGFIC_01_M00244 TRANSFAC - 11836075 11836086 4.0E-06 TAGCGTGGGTGG 12 V_E12_Q6_M00693 TRANSFAC + 11828189 11828199 8.0E-06 GACAGGTGGCG 11 V_HSF1_01_M00146 TRANSFAC - 11835262 11835271 7.0E-06 AGAATTTTCT 10 V_NFE4_Q5_M02105 TRANSFAC - 11836337 11836348 0.0E+00 CTCCCTCTCCAG 12 Tal1_Gata1_MA0140.1 JASPAR - 11831743 11831760 3.0E-06 TTGCTGAGTTGTGATAAG 18 V_SRF_Q5_02_M01007 TRANSFAC + 11836229 11836247 6.0E-06 CTGCTCCTTCTATGGCTCC 19 V_STAT4_Q5_M02117 TRANSFAC - 11836252 11836261 4.0E-06 TTACAGGAAA 10 V_SRF_03_M01304 TRANSFAC - 11836233 11836245 6.0E-06 AGCCATAGAAGGA 13 V_BLIMP1_Q6_M01066 TRANSFAC + 11828229 11828244 4.0E-06 AAGGCAGGGAATTTAG 16 V_GLI3_Q5_01_M01657 TRANSFAC - 11836074 11836082 6.0E-06 GTGGGTGGT 9 V_MYOD_01_M00001 TRANSFAC + 11828188 11828199 5.0E-06 CGACAGGTGGCG 12 V_TTF1_Q5_M02034 TRANSFAC + 11836050 11836063 3.0E-06 ATGCCCTTGAGAGG 14 V_GATA1_04_M00128 TRANSFAC + 11835224 11835236 7.0E-06 TTCTGATAGGGAT 13 V_EBNA1_01_M01745 TRANSFAC - 11828136 11828151 1.0E-05 GGAAGCCTCTGCTGCT 16 V_STAT1STAT1_Q3_M01212 TRANSFAC + 11836181 11836193 3.0E-06 TTTTCCCAGCAAA 13 V_ETS1_B_M00339 TRANSFAC - 11836218 11836232 4.0E-06 GCAGGATGTGGGTTG 15 V_SRF_Q5_01_M00922 TRANSFAC - 11836229 11836243 6.0E-06 CCATAGAAGGAGCAG 15 V_SRF_Q4_M00810 TRANSFAC - 11836227 11836244 4.0E-06 GCCATAGAAGGAGCAGGA 18 V_TCFAP2B_04_M02924 TRANSFAC + 11831778 11831792 4.0E-06 GTAGCCAGAGGCATT 15 V_EWSR1FLI1_01_M02252 TRANSFAC + 11828223 11828240 2.0E-06 GGAAAGAAGGCAGGGAAT 18 V_GATA6_04_M02757 TRANSFAC - 11831738 11831754 9.0E-06 AGTTGTGATAAGAGGTG 17 V_STAT1_Q6_M01823 TRANSFAC - 11836252 11836261 4.0E-06 TTACAGGAAA 10 V_STAT1_05_M01260 TRANSFAC - 11836173 11836194 8.0E-06 ATTTGCTGGGAAAAGGTAAATG 22 V_PAX4_04_M00380 TRANSFAC - 11836307 11836336 1.0E-06 AAAAAAAGAACCAAAATTGTGAATTACACC 30

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.