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RPA3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6119 replication protein A3, 14kDa chr7 - 7757738 - 7763238 7758238 Transcription Factor Binding Sites   Download all TFBS in the RPA3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints VSX2_homeodomain_DBD_monomeric_8_1 SELEX - 7758960 7758967 5.0E-06 CTAATTAT 8 DLX1_homeodomain_DBD_monomeric_10_1 SELEX - 7758959 7758968 8.0E-06 CCTAATTATA 10 TBX20_TBX_DBD_dimeric_19_1 SELEX + 7758859 7758877 3.0E-06 ATGTGTGATTTTGAAATCT 19 ISX_homeodomain_DBD_dimeric_13_1 SELEX - 7758960 7758972 4.0E-06 TTACCCTAATTAT 13 TBX1_TBX_DBD_dimeric_19_1 SELEX + 7758859 7758877 6.0E-06 ATGTGTGATTTTGAAATCT 19 EOMES_TBX_DBD_monomeric_13_1 SELEX + 7758858 7758870 8.0E-06 AATGTGTGATTTT 13 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 7760054 7760068 6.0E-06 GGGAAATGATTAAAA 15 ATF4_bZIP_DBD_dimeric_13_1 SELEX + 7758816 7758828 9.0E-06 CAATGATGAAATA 13 ATF4_bZIP_DBD_dimeric_13_1 SELEX + 7759132 7759144 0.0E+00 TGATGATGCAATC 13 Atf4_bZIP_DBD_dimeric_14_1 SELEX + 7759131 7759144 0.0E+00 GTGATGATGCAATC 14 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 7760055 7760067 7.0E-06 GGAAATGATTAAA 13 TBX15_TBX_DBD_dimeric_19_1 SELEX + 7758859 7758877 6.0E-06 ATGTGTGATTTTGAAATCT 19 POU6F2_POU_full_monomeric_10_1 SELEX - 7758959 7758968 8.0E-06 CCTAATTATA 10 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 7760017 7760026 6.0E-06 CCTATAAAAT 10 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 7760054 7760068 8.0E-06 GGGAAATGATTAAAA 15 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX - 7760017 7760026 7.0E-06 CCTATAAAAT 10 V_HOXA9_01_M01351 TRANSFAC - 7760013 7760029 7.0E-06 AAACCTATAAAATCAGA 17 V_FOXP1_01_M00987 TRANSFAC + 7760044 7760063 6.0E-06 GCATCTGTGTTTTTAATCAT 20 V_TBX15_01_M01263 TRANSFAC + 7758859 7758877 7.0E-06 ATGTGTGATTTTGAAATCT 19 V_TBX15_01_M01263 TRANSFAC - 7758859 7758877 1.0E-06 AGATTTCAAAATCACACAT 19 V_SOX40_04_M02908 TRANSFAC - 7759310 7759325 3.0E-06 TAAGATTATAAAGTAC 16 V_SRY_07_M02813 TRANSFAC - 7758953 7758968 8.0E-06 CCTAATTATATTGCTC 16 V_HMGIY_Q3_M01010 TRANSFAC + 7759223 7759237 6.0E-06 ACTGTATATTTTTCA 15 V_EVI1_04_M00081 TRANSFAC - 7760053 7760067 2.0E-06 GGAAATGATTAAAAA 15 V_BCL6_01_M01183 TRANSFAC + 7759141 7759156 5.0E-06 AATCTGATTATACTTT 16 V_ZFP740_04_M02938 TRANSFAC + 7760061 7760077 8.0E-06 CATTTCCCCCCCTAACT 17 V_CBF_02_M01080 TRANSFAC - 7759165 7759180 1.0E-06 TTGACTGTGGTTAGAA 16 V_PROP1_01_M01294 TRANSFAC - 7758956 7758966 3.0E-06 TAATTATATTG 11 V_POU1F1_Q6_M00744 TRANSFAC - 7760054 7760063 8.0E-06 ATGATTAAAA 10 V_OCTAMER_02_M01477 TRANSFAC + 7758955 7758971 5.0E-06 GCAATATAATTAGGGTA 17 V_HOXD13_01_M01404 TRANSFAC - 7760014 7760029 1.0E-06 AAACCTATAAAATCAG 16 V_AP4_Q6_01_M00927 TRANSFAC + 7759014 7759022 6.0E-06 ACCAGCTGC 9 V_TCFAP2E_04_M02926 TRANSFAC - 7759276 7759289 0.0E+00 AACGTGAAAAAAAA 14 V_CEBPB_01_M00109 TRANSFAC + 7758864 7758877 1.0E-06 TGATTTTGAAATCT 14 V_CEBPB_01_M00109 TRANSFAC + 7759132 7759145 9.0E-06 TGATGATGCAATCT 14 V_ELF4_04_M02850 TRANSFAC - 7759270 7759286 0.0E+00 GTGAAAAAAAAAACTAC 17 V_ELF4_04_M02850 TRANSFAC - 7759271 7759287 2.0E-06 CGTGAAAAAAAAAACTA 17 V_CRX_Q4_M00623 TRANSFAC + 7759030 7759042 5.0E-06 TGACTAATCTCTC 13 V_FOXA2_02_M02853 TRANSFAC + 7758848 7758862 6.0E-06 GAGGATAACAAATGT 15 V_CEBPE_Q6_M01868 TRANSFAC - 7758866 7758879 1.0E-06 AGAGATTTCAAAAT 14 V_CEBPE_Q6_M01868 TRANSFAC - 7759134 7759147 9.0E-06 TCAGATTGCATCAT 14 V_ZFP105_03_M02827 TRANSFAC - 7759271 7759285 9.0E-06 TGAAAAAAAAAACTA 15 V_TBX18_01_M01262 TRANSFAC - 7758859 7758877 5.0E-06 AGATTTCAAAATCACACAT 19 V_HOXB13_01_M01467 TRANSFAC - 7760014 7760029 0.0E+00 AAACCTATAAAATCAG 16 V_GATA3_05_M02859 TRANSFAC - 7759130 7759151 5.0E-06 ATAATCAGATTGCATCATCACC 22 V_SOX1_04_M02906 TRANSFAC + 7761071 7761085 4.0E-06 GCATAATTGTGAGCC 15 V_CEBPD_Q6_M00621 TRANSFAC - 7759133 7759144 8.0E-06 GATTGCATCATC 12 V_HOXB9_01_M01426 TRANSFAC + 7758952 7758967 2.0E-06 GGAGCAATATAATTAG 16 V_HOXB9_01_M01426 TRANSFAC - 7760014 7760029 9.0E-06 AAACCTATAAAATCAG 16 V_IRF3_Q3_M01279 TRANSFAC + 7759277 7759289 6.0E-06 TTTTTTTCACGTT 13 V_CDX2_01_M01449 TRANSFAC + 7758951 7758966 8.0E-06 TGGAGCAATATAATTA 16 V_CDX2_Q5_M00729 TRANSFAC - 7758954 7758967 5.0E-06 CTAATTATATTGCT 14 V_TATA_C_M00216 TRANSFAC - 7760017 7760026 4.0E-06 CCTATAAAAT 10 V_ISRE_01_M00258 TRANSFAC - 7759003 7759017 6.0E-06 TGGTTTCAAATTCAG 15 V_CDX1_01_M01373 TRANSFAC + 7758951 7758966 8.0E-06 TGGAGCAATATAATTA 16 V_OCT1_04_M00138 TRANSFAC - 7759147 7759169 8.0E-06 TAGAATACATTCAAAAGTATAAT 23 V_GATA4_Q3_M00632 TRANSFAC - 7758875 7758886 4.0E-06 AAATAGAAGAGA 12 V_MTF1_06_M02882 TRANSFAC - 7759340 7759353 3.0E-06 ACATATGAAAACTA 14 V_CEBPA_01_M00116 TRANSFAC - 7759132 7759145 7.0E-06 AGATTGCATCATCA 14 V_HDX_01_M01333 TRANSFAC - 7758859 7758875 7.0E-06 ATTTCAAAATCACACAT 17 V_FOX_Q2_M00809 TRANSFAC + 7759222 7759234 4.0E-06 GACTGTATATTTT 13 V_CEBPB_Q6_M01896 TRANSFAC - 7759199 7759208 7.0E-06 TTGTGAAATC 10 V_TITF1_Q3_M00432 TRANSFAC - 7760092 7760101 8.0E-06 TCTCAAGTTT 10 V_TBX22_01_M01195 TRANSFAC + 7758859 7758877 2.0E-06 ATGTGTGATTTTGAAATCT 19 V_DMRT2_01_M01147 TRANSFAC - 7759157 7759172 9.0E-06 GGTTAGAATACATTCA 16 V_SRF_06_M02916 TRANSFAC - 7759268 7759284 5.0E-06 GAAAAAAAAAACTACTA 17 V_SRF_06_M02916 TRANSFAC - 7759270 7759286 0.0E+00 GTGAAAAAAAAAACTAC 17 V_SRF_06_M02916 TRANSFAC - 7759271 7759287 0.0E+00 CGTGAAAAAAAAAACTA 17 V_SRF_06_M02916 TRANSFAC - 7759272 7759288 6.0E-06 ACGTGAAAAAAAAAACT 17 V_SOX18_04_M02905 TRANSFAC - 7758901 7758916 4.0E-06 GGATCAAATTCAAGAC 16 V_PIT1_Q6_M00802 TRANSFAC - 7759145 7759162 3.0E-06 CATTCAAAAGTATAATCA 18 V_CEBP_Q2_01_M00912 TRANSFAC - 7758864 7758875 6.0E-06 ATTTCAAAATCA 12 V_TCF3_05_M02920 TRANSFAC - 7759274 7759288 6.0E-06 ACGTGAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC - 7759275 7759289 6.0E-06 AACGTGAAAAAAAAA 15 V_CEBPG_Q6_01_M01869 TRANSFAC - 7758865 7758876 3.0E-06 GATTTCAAAATC 12 V_AR_Q6_M00962 TRANSFAC + 7759091 7759099 6.0E-06 TGAGCACAT 9 V_PAX4_04_M00380 TRANSFAC - 7759128 7759157 8.0E-06 AAAAGTATAATCAGATTGCATCATCACCAT 30 V_HOXA4_Q2_M00640 TRANSFAC + 7758960 7758967 5.0E-06 ATAATTAG 8

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.