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RP1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6101 retinitis pigmentosa 1 (autosomal dominant) chr8 + 55523626 - 55529126 55528626 Transcription Factor Binding Sites   Download all TFBS in the RP1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 55533104 55533116 9.0E-06 GTATACATTTAAA 13 Foxk1_forkhead_DBD_putatively-multimeric_11_1 SELEX - 55528184 55528194 7.0E-06 CGTACACAATT 11 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 55528269 55528285 9.0E-06 TTATTTTTAAATGATTA 17 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 55528219 55528232 8.0E-06 CAATGAGGTAATAA 14 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 55528268 55528279 4.0E-06 TTTAAAAATAAA 12 Foxj3_forkhead_DBD_putatively-multimeric_11_1 SELEX - 55528185 55528195 1.0E-06 ACGTACACAAT 11 FOXL1_forkhead_full_dimeric_13_1 SELEX - 55528265 55528277 9.0E-06 TAAAAATAAAGAT 13 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 55531530 55531538 9.0E-06 TATTTAAAT 9 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 55531531 55531539 9.0E-06 TATTTAAAT 9 ZNF435_C2H2_full_dimeric_18_1 SELEX - 55532870 55532887 7.0E-06 TTTGTTATCTAAACATAT 18 POU1F1_POU_DBD_monomeric_14_1 SELEX - 55531528 55531541 8.0E-06 AGTATTTAAATAAG 14 STAT1_MA0137.2 JASPAR + 55533060 55533074 1.0E-05 CATTTCTCAGAACTT 15 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 55528268 55528279 2.0E-06 TTTAAAAATAAA 12 MAFF_bZIP_DBD_dimeric_15_1 SELEX + 55528170 55528184 7.0E-06 ATGCTGAGTCACCAA 15 MAFF_bZIP_DBD_dimeric_15_1 SELEX - 55528170 55528184 5.0E-06 TTGGTGACTCAGCAT 15 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 55530453 55530466 8.0E-06 CACAAATGTTTTTA 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 55530453 55530466 6.0E-06 TAAAAACATTTGTG 14 FOXK1_forkhead_DBD_putatively-multimeric_10_1 SELEX - 55528185 55528194 1.0E-06 CGTACACAAT 10 POU6F2_POU_DBD_dimeric_16_1 SELEX + 55528218 55528233 9.0E-06 TCAATGAGGTAATAAG 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 55528218 55528233 9.0E-06 CTTATTACCTCATTGA 16 CEBPB_bZIP_full_dimeric_10_1 SELEX + 55530436 55530445 1.0E-05 ATTGTGCAAT 10 CEBPB_bZIP_full_dimeric_10_1 SELEX - 55530436 55530445 9.0E-06 ATTGCACAAT 10 Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX + 55531588 55531604 1.0E-05 CAGCTTGCTCAAGGTCA 17 MEF2A_MA0052.1 JASPAR + 55528269 55528278 7.0E-06 TTATTTTTAA 10 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 55530441 55530454 4.0E-06 GCAATCAATGAACA 14 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 55528274 55528288 8.0E-06 TTTAAATGATTACCA 15 Mafb_bZIP_DBD_dimeric_17_1 SELEX + 55528169 55528185 6.0E-06 TATGCTGAGTCACCAAA 17 Mafb_bZIP_DBD_dimeric_17_1 SELEX - 55528169 55528185 3.0E-06 TTTGGTGACTCAGCATA 17 TFCP2_CP2_full_dimeric_10_1 SELEX - 55528526 55528535 6.0E-06 AAACCAGTTC 10 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 55528266 55528276 9.0E-06 AAAAATAAAGA 11 MAFK_bZIP_DBD_dimeric_21_1 SELEX + 55528167 55528187 1.0E-06 GTTATGCTGAGTCACCAAATT 21 MAFK_bZIP_DBD_dimeric_21_1 SELEX - 55528167 55528187 1.0E-06 AATTTGGTGACTCAGCATAAC 21 NRL_bZIP_DBD_monomeric_11_1 SELEX + 55531643 55531653 8.0E-06 GTTTTGCTGAC 11 ZSCAN4_C2H2_full_monomeric_15_1 SELEX - 55528132 55528146 3.0E-06 AGCACACGATGAAAT 15 Foxd3_MA0041.1 JASPAR - 55528246 55528257 8.0E-06 TTTTGTTTTATT 12 EN1_homeodomain_full_dimeric_14_1 SELEX - 55528219 55528232 9.0E-06 TTATTACCTCATTG 14 IRF9_IRF_full_trimeric_15_1 SELEX - 55531636 55531650 8.0E-06 AGCAAAACTGCAACC 15 MAFG_bZIP_full_dimeric_21_1 SELEX + 55528167 55528187 0.0E+00 GTTATGCTGAGTCACCAAATT 21 MAFG_bZIP_full_dimeric_21_1 SELEX - 55528167 55528187 0.0E+00 AATTTGGTGACTCAGCATAAC 21 Tp53_p53l_DBD_dimeric_17_1 SELEX + 55531689 55531705 5.0E-06 ACATGTCTGCTACAGCT 17 FOXI1_forkhead_full_dimeric_17_1 SELEX + 55530458 55530474 2.0E-06 ATGTTTTTATTCAACAA 17 CPEB1_RRM_full_monomeric_8_1 SELEX - 55530461 55530468 4.0E-06 AATAAAAA 8 MAFK_bZIP_full_monomeric_12_1 SELEX + 55531642 55531653 3.0E-06 AGTTTTGCTGAC 12 CEBPE_bZIP_DBD_dimeric_10_1 SELEX - 55530436 55530445 7.0E-06 ATTGCACAAT 10 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 55528274 55528288 1.0E-05 TTTAAATGATTACCA 15 NFE2L2_MA0150.1 JASPAR - 55528171 55528181 1.0E-06 GTGACTCAGCA 11 V_CEBPG_Q6_M00622 TRANSFAC - 55528271 55528283 1.0E-06 ATCATTTAAAAAT 13 V_STAT5A_Q6_M01890 TRANSFAC + 55533059 55533071 1.0E-06 GCATTTCTCAGAA 13 V_DBX1_01_M01483 TRANSFAC + 55528269 55528285 8.0E-06 TTATTTTTAAATGATTA 17 V_DBX1_01_M01483 TRANSFAC - 55528269 55528285 0.0E+00 TAATCATTTAAAAATAA 17 V_SOX14_05_M02902 TRANSFAC + 55533030 55533044 1.0E-06 TTCACACAATGATGA 15 V_MAFK_03_M02776 TRANSFAC + 55531641 55531655 7.0E-06 CAGTTTTGCTGACTC 15 V_CEBP_Q3_M00770 TRANSFAC + 55533130 55533141 2.0E-06 ATGTTTTGCAAA 12 V_FOXD3_01_M00130 TRANSFAC - 55528246 55528257 9.0E-06 TTTTGTTTTATT 12 V_MAFB_05_M02775 TRANSFAC + 55531642 55531658 3.0E-06 AGTTTTGCTGACTCCAT 17 V_MMEF2_Q6_M00405 TRANSFAC + 55528239 55528254 8.0E-06 GTGCCTAAATAAAACA 16 V_HOXA13_02_M01297 TRANSFAC + 55528245 55528253 1.0E-06 AAATAAAAC 9 V_MAFB_03_M02879 TRANSFAC - 55533129 55533143 1.0E-05 AGTTTGCAAAACATT 15 V_MEF2_02_M00231 TRANSFAC - 55528264 55528285 7.0E-06 TAATCATTTAAAAATAAAGATC 22 V_NR2F2_03_M02783 TRANSFAC + 55533198 55533213 6.0E-06 TCTATAAGGTCATGTT 16 V_SRY_02_M00160 TRANSFAC + 55528248 55528259 2.0E-06 TAAAACAAAAGG 12 V_CEBP_Q2_M00190 TRANSFAC - 55530434 55530447 8.0E-06 TGATTGCACAATGT 14 V_CEBP_Q2_M00190 TRANSFAC - 55533082 55533095 2.0E-06 ACATTGCTTAACAA 14 V_STAT5B_01_M00459 TRANSFAC + 55533060 55533074 3.0E-06 CATTTCTCAGAACTT 15 V_LHX3_01_M01471 TRANSFAC + 55531525 55531541 9.0E-06 AGTCTTATTTAAATACT 17 V_TCFAP2E_04_M02926 TRANSFAC + 55528244 55528257 9.0E-06 TAAATAAAACAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 55533145 55533158 1.0E-06 TAAGTGAAAAAAAT 14 V_CEBPB_01_M00109 TRANSFAC + 55533082 55533095 6.0E-06 TTGTTAAGCAATGT 14 V_CEBPB_01_M00109 TRANSFAC + 55533130 55533143 5.0E-06 ATGTTTTGCAAACT 14 V_MEF2A_Q6_M02024 TRANSFAC + 55528270 55528279 1.0E-06 TATTTTTAAA 10 V_MEF2A_Q6_M02024 TRANSFAC + 55531530 55531539 8.0E-06 TATTTAAATA 10 V_MEF2A_Q6_M02024 TRANSFAC - 55531530 55531539 8.0E-06 TATTTAAATA 10 V_STAT4_Q4_M01666 TRANSFAC - 55533058 55533071 5.0E-06 TTCTGAGAAATGCA 14 V_HNF1_C_M00206 TRANSFAC - 55528272 55528288 0.0E+00 TGGTAATCATTTAAAAA 17 V_AP1_Q6_M00174 TRANSFAC - 55528172 55528182 1.0E-05 GGTGACTCAGC 11 V_ETS_Q4_M00771 TRANSFAC + 55530385 55530396 1.0E-05 ATTCACTTCCTT 12 V_ELF4_04_M02850 TRANSFAC - 55528264 55528280 3.0E-06 ATTTAAAAATAAAGATC 17 V_ELF4_04_M02850 TRANSFAC - 55530456 55530472 2.0E-06 GTTGAATAAAAACATTT 17 V_SOX7_03_M02807 TRANSFAC + 55528244 55528265 3.0E-06 TAAATAAAACAAAAGGCCTAGA 22 V_SOX7_03_M02807 TRANSFAC + 55530463 55530484 1.0E-06 TTTATTCAACAATAATACCTAA 22 V_FOXA2_02_M02853 TRANSFAC + 55528245 55528259 4.0E-06 AAATAAAACAAAAGG 15 V_POU3F2_01_M00463 TRANSFAC + 55528115 55528128 3.0E-06 AAGCATAAAATCAT 14 V_POU3F2_01_M00463 TRANSFAC - 55530458 55530471 8.0E-06 TTGAATAAAAACAT 14 V_LMX1_01_M01409 TRANSFAC + 55531525 55531541 4.0E-06 AGTCTTATTTAAATACT 17 V_GFI1_01_M00250 TRANSFAC + 55528115 55528138 0.0E+00 AAGCATAAAATCATAGCATTTCAT 24 V_TEF_Q6_M00672 TRANSFAC + 55533027 55533038 2.0E-06 ATGTTCACACAA 12 V_SOX7_04_M02911 TRANSFAC - 55530434 55530455 4.0E-06 GTGTTCATTGATTGCACAATGT 22 V_CEBPD_Q6_M00621 TRANSFAC - 55533037 55533048 4.0E-06 GATTTCATCATT 12 V_CEBPB_02_M00117 TRANSFAC - 55530434 55530447 1.0E-05 TGATTGCACAATGT 14 V_AMEF2_Q6_M00403 TRANSFAC + 55528239 55528256 9.0E-06 GTGCCTAAATAAAACAAA 18 V_IRF3_Q3_M01279 TRANSFAC + 55533146 55533158 3.0E-06 TTTTTTTCACTTA 13 V_CDX2_Q5_M00729 TRANSFAC + 55532937 55532950 6.0E-06 ACAGATTTATAGCC 14 V_HNF1_Q6_01_M01011 TRANSFAC - 55528263 55528283 1.0E-06 ATCATTTAAAAATAAAGATCT 21 V_MEF2_03_M00232 TRANSFAC - 55532865 55532886 4.0E-06 TTGTTATCTAAACATATCTAAA 22 V_SOX18_03_M02801 TRANSFAC - 55530464 55530479 0.0E+00 TATTATTGTTGAATAA 16 V_JUNDM2_04_M02876 TRANSFAC + 55528169 55528184 9.0E-06 TATGCTGAGTCACCAA 16 V_OCT1_04_M00138 TRANSFAC - 55528266 55528288 1.0E-06 TGGTAATCATTTAAAAATAAAGA 23 V_OCT1_04_M00138 TRANSFAC + 55533243 55533265 9.0E-06 GTGTATATGTGATAATTTATCTA 23 V_OCT1_08_M01354 TRANSFAC + 55533249 55533264 1.0E-05 ATGTGATAATTTATCT 16 V_MEF2_Q6_01_M00941 TRANSFAC - 55528243 55528254 5.0E-06 TGTTTTATTTAG 12 V_NCX_02_M01420 TRANSFAC - 55528269 55528285 0.0E+00 TAATCATTTAAAAATAA 17 V_HB24_01_M01399 TRANSFAC + 55531527 55531541 2.0E-06 TCTTATTTAAATACT 15 V_MAFK_Q3_M02022 TRANSFAC - 55528170 55528180 0.0E+00 TGACTCAGCAT 11 V_STAT4_Q5_M02117 TRANSFAC - 55533062 55533071 5.0E-06 TTCTGAGAAA 10 V_TBP_06_M02814 TRANSFAC + 55528266 55528281 5.0E-06 TCTTTATTTTTAAATG 16 V_TBP_06_M02814 TRANSFAC - 55528268 55528283 6.0E-06 ATCATTTAAAAATAAA 16 V_SOX11_03_M02795 TRANSFAC + 55528246 55528262 6.0E-06 AATAAAACAAAAGGCCT 17 V_LIM1_01_M01418 TRANSFAC + 55531525 55531541 5.0E-06 AGTCTTATTTAAATACT 17 V_SOX17_04_M02904 TRANSFAC - 55528212 55528228 9.0E-06 TACCTCATTGATGTAAT 17 V_MAF_Q6_01_M00983 TRANSFAC + 55528171 55528181 7.0E-06 TGCTGAGTCAC 11 V_HOXD9_Q2_M01834 TRANSFAC + 55528115 55528124 4.0E-06 AAGCATAAAA 10 V_HOXD9_Q2_M01834 TRANSFAC - 55533212 55533221 8.0E-06 AACCATTAAA 10 V_GFI1_Q6_M01067 TRANSFAC + 55533112 55533124 8.0E-06 TTAAATCAGTGGC 13 V_MTF1_06_M02882 TRANSFAC + 55528245 55528258 7.0E-06 AAATAAAACAAAAG 14 V_CEBPA_01_M00116 TRANSFAC - 55533082 55533095 2.0E-06 ACATTGCTTAACAA 14 V_IPF1_05_M01255 TRANSFAC - 55533210 55533221 9.0E-06 AACCATTAAACA 12 V_OCT2_01_M01368 TRANSFAC - 55531527 55531542 5.0E-06 CAGTATTTAAATAAGA 16 V_FOXL1_02_M02857 TRANSFAC + 55528244 55528259 1.0E-06 TAAATAAAACAAAAGG 16 V_CBF_01_M01079 TRANSFAC - 55532885 55532900 2.0E-06 AATACAGTGGTAATTT 16 V_NCX_01_M00484 TRANSFAC - 55532884 55532893 2.0E-06 TGGTAATTTG 10 V_HDX_01_M01333 TRANSFAC + 55530436 55530452 4.0E-06 ATTGTGCAATCAATGAA 17 V_HDX_01_M01333 TRANSFAC + 55533038 55533054 0.0E+00 ATGATGAAATCACCTAA 17 V_CPHX_01_M01478 TRANSFAC - 55533037 55533050 3.0E-06 GTGATTTCATCATT 14 V_CPHX_01_M01478 TRANSFAC + 55533038 55533051 1.0E-06 ATGATGAAATCACC 14 V_LMX1B_01_M01363 TRANSFAC - 55531525 55531541 4.0E-06 AGTATTTAAATAAGACT 17 V_NRF2_Q4_M00821 TRANSFAC + 55528170 55528182 1.0E-06 ATGCTGAGTCACC 13 V_RSRFC4_01_M00026 TRANSFAC + 55528266 55528281 4.0E-06 TCTTTATTTTTAAATG 16 V_CEBPB_Q6_M01896 TRANSFAC + 55530437 55530446 2.0E-06 TTGTGCAATC 10 V_SREBP_Q3_M00776 TRANSFAC - 55528556 55528567 9.0E-06 GAGCTCACCCTA 12 V_OCT1_06_M00162 TRANSFAC + 55531528 55531541 2.0E-06 CTTATTTAAATACT 14 V_OCT1_06_M00162 TRANSFAC - 55533107 55533120 5.0E-06 CTGATTTAAATGTA 14 V_RARA_03_M02787 TRANSFAC + 55533198 55533213 6.0E-06 TCTATAAGGTCATGTT 16 V_STAT5A_01_M00457 TRANSFAC + 55533060 55533074 4.0E-06 CATTTCTCAGAACTT 15 V_STAT5A_01_M00457 TRANSFAC - 55533060 55533074 5.0E-06 AAGTTCTGAGAAATG 15 V_SRF_06_M02916 TRANSFAC - 55528264 55528280 1.0E-06 ATTTAAAAATAAAGATC 17 V_SRF_06_M02916 TRANSFAC - 55530456 55530472 1.0E-06 GTTGAATAAAAACATTT 17 V_NFE2_01_M00037 TRANSFAC + 55528171 55528181 0.0E+00 TGCTGAGTCAC 11 V_PAX4_02_M00377 TRANSFAC + 55532882 55532892 6.0E-06 AACAAATTACC 11 V_SOX12_03_M02796 TRANSFAC - 55530464 55530477 4.0E-06 TTATTGTTGAATAA 14 V_SRY_05_M02917 TRANSFAC + 55530464 55530480 9.0E-06 TTATTCAACAATAATAC 17 V_NFE2L2_01_M02263 TRANSFAC - 55528171 55528181 1.0E-06 GTGACTCAGCA 11 V_CEBP_Q2_01_M00912 TRANSFAC - 55530434 55530445 3.0E-06 ATTGCACAATGT 12 V_CMAF_01_M01070 TRANSFAC + 55531642 55531660 2.0E-06 AGTTTTGCTGACTCCATTG 19 V_SOX5_07_M02909 TRANSFAC - 55533248 55533264 7.0E-06 AGATAAATTATCACATA 17 V_GATA6_04_M02757 TRANSFAC + 55532873 55532889 5.0E-06 TGTTTAGATAACAAATT 17 V_ZFP128_04_M02932 TRANSFAC + 55533103 55533116 5.0E-06 CGTATACATTTAAA 14 V_ZFP128_04_M02932 TRANSFAC - 55533103 55533116 6.0E-06 TTTAAATGTATACG 14 V_TCF11MAFG_01_M00284 TRANSFAC - 55528165 55528186 2.0E-06 ATTTGGTGACTCAGCATAACGC 22 V_CEBPE_01_M01772 TRANSFAC + 55530436 55530445 4.0E-06 ATTGTGCAAT 10 V_DTYPEPA_B_M00334 TRANSFAC - 55533211 55533220 0.0E+00 ACCATTAAAC 10 V_GLIS2_04_M02863 TRANSFAC - 55528266 55528279 2.0E-06 TTTAAAAATAAAGA 14 V_GLIS2_04_M02863 TRANSFAC + 55528268 55528281 5.0E-06 TTTATTTTTAAATG 14 V_CEBPG_Q6_01_M01869 TRANSFAC - 55530435 55530446 2.0E-06 GATTGCACAATG 12 V_STAT1_05_M01260 TRANSFAC - 55533053 55533074 2.0E-06 AAGTTCTGAGAAATGCATTGTT 22 V_PAX4_04_M00380 TRANSFAC - 55533203 55533232 2.0E-06 GAAAACTATGCAACCATTAAACATGACCTT 30 V_CEBPA_Q6_M01866 TRANSFAC + 55530434 55530446 9.0E-06 ACATTGTGCAATC 13 V_CEBPA_Q6_M01866 TRANSFAC + 55533130 55533142 4.0E-06 ATGTTTTGCAAAC 13 V_NANOG_02_M01247 TRANSFAC + 55528244 55528263 1.0E-06 TAAATAAAACAAAAGGCCTA 20

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