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DHX35 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 60625 DEAH (Asp-Glu-Ala-His) box polypeptide 35 chr20 + 37585980 - 37591480 37590980 Transcription Factor Binding Sites   Download all TFBS in the DHX35 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX - 37590883 37590894 3.0E-06 GCCACGCCCCCA 12 SP3_C2H2_DBD_monomeric_11_1 SELEX - 37590884 37590894 3.0E-06 GCCACGCCCCC 11 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX - 37590994 37591007 0.0E+00 GGGGTAAAAGGTCA 14 HOXC13_homeodomain_DBD_monomeric_11_1 SELEX + 37590712 37590722 2.0E-06 GCTCGTAAAAG 11 HOXC13_homeodomain_DBD_monomeric_11_1 SELEX - 37594970 37594980 1.0E-05 CCTCATAAAAG 11 ZNF306_C2H2_full_monomeric_14_1 SELEX + 37590981 37590994 6.0E-06 GGAGCTAGCCTCGT 14 RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 37591531 37591546 2.0E-06 ACAGGTAAAGAAGTCA 16 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 37590814 37590824 1.0E-05 GCCCCGCCCCC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 37590884 37590894 1.0E-06 GCCACGCCCCC 11 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 37590716 37590726 5.0E-06 GTAAAAGGTCA 11 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX - 37590994 37591004 5.0E-06 GTAAAAGGTCA 11 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX + 37590718 37590730 4.0E-06 AAAAGGTCACCTG 13 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 37590990 37591002 1.0E-06 AAAAGGTCACGAG 13 EBF1_EBF_full_dimeric_14_1 SELEX - 37591213 37591226 7.0E-06 AATCCCTCGGGACC 14 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 37590882 37590895 2.0E-06 GGCCACGCCCCCAC 14 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX - 37590994 37591007 0.0E+00 GGGGTAAAAGGTCA 14 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX - 37590994 37591007 0.0E+00 GGGGTAAAAGGTCA 14 SRY_HMG_DBD_dimeric_16_1 SELEX + 37590413 37590428 9.0E-06 ATCATTTCGCATTGTT 16 HNF1B_MA0153.1 JASPAR + 37590587 37590598 7.0E-06 TTCGTATTTAAT 12 HOXD13_homeodomain_DBD_monomeric_11_1 SELEX + 37590712 37590722 2.0E-06 GCTCGTAAAAG 11 SOX9_HMG_DBD_monomeric_9_1 SELEX + 37591557 37591565 4.0E-06 GAACAATAG 9 Pax4_MA0068.1 JASPAR - 37591639 37591668 4.0E-06 AACAATTATCCTAAAAGAAAATAACACACT 30 SPIB_ETS_DBD_monomeric_14_1 SELEX - 37591724 37591737 7.0E-06 TAAGAGAGGAAGTG 14 ONECUT1_CUT_full_monomeric_14_1 SELEX + 37594889 37594902 3.0E-06 GAAAAATCAATCAT 14 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX - 37591531 37591544 5.0E-06 AGGTAAAGAAGTCA 14 SP1_MA0079.2 JASPAR - 37590814 37590823 7.0E-06 CCCCGCCCCC 10 ONECUT2_CUT_DBD_monomeric_14_1 SELEX + 37594889 37594902 1.0E-06 GAAAAATCAATCAT 14 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX - 37590993 37591007 0.0E+00 GGGGTAAAAGGTCAC 15 SRY_MA0084.1 JASPAR - 37590423 37590431 7.0E-06 TAAAACAAT 9 SP4_C2H2_full_monomeric_17_1 SELEX - 37590881 37590897 3.0E-06 ACGGCCACGCCCCCACA 17 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 37590994 37591007 1.0E-06 GGGGTAAAAGGTCA 14 SP1_C2H2_DBD_monomeric_11_1 SELEX + 37590357 37590367 7.0E-06 ACCCCACCCCC 11 SP1_C2H2_DBD_monomeric_11_1 SELEX - 37590884 37590894 5.0E-06 GCCACGCCCCC 11 SOX7_HMG_full_dimeric_16_1 SELEX - 37590413 37590428 4.0E-06 AACAATGCGAAATGAT 16 PBX1_MA0070.1 JASPAR + 37594892 37594903 1.0E-06 AAATCAATCATA 12 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 37590993 37591008 4.0E-06 TGGGGTAAAAGGTCAC 16 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 37590881 37590895 5.0E-06 GGCCACGCCCCCACA 15 Klf12_C2H2_DBD_monomeric_15_1 SELEX + 37590935 37590949 5.0E-06 GGCCACGCCCTCCGG 15 PITX1_homeodomain_full_monomeric_9_1 SELEX + 37590593 37590601 5.0E-06 TTTAATCCA 9 HOXB13_homeodomain_DBD_monomeric_11_1 SELEX + 37590712 37590722 3.0E-06 GCTCGTAAAAG 11 HOXA13_homeodomain_full_monomeric_11_1 SELEX + 37590712 37590722 4.0E-06 GCTCGTAAAAG 11 PPARG_MA0066.1 JASPAR - 37590432 37590451 3.0E-06 GTGCGGCACAGTGCCCCAAA 20 HNF4A_MA0114.1 JASPAR - 37590994 37591006 8.0E-06 GGGTAAAAGGTCA 13 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX - 37591261 37591271 1.0E-05 ACAAGGTCACA 11 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 37590994 37591007 1.0E-06 GGGGTAAAAGGTCA 14 Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX + 37590713 37590721 6.0E-06 CTCGTAAAA 9 Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX - 37594971 37594979 1.0E-05 CTCATAAAA 9 SOX9_MA0077.1 JASPAR + 37591557 37591565 9.0E-06 GAACAATAG 9 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 37591262 37591280 8.0E-06 GTGACCTTGTTAAAGTGGT 19 ZNF524_C2H2_full_monomeric_14_1 SELEX - 37591457 37591470 9.0E-06 TTCGAACCCGGACA 14 RORA_1_MA0071.1 JASPAR - 37591263 37591272 2.0E-06 AACAAGGTCA 10 Sox2_MA0143.1 JASPAR - 37591551 37591565 1.0E-05 CTATTGTTCTGCCCA 15 RARG_nuclearreceptor_full_dimeric_16_1 SELEX - 37590993 37591008 1.0E-06 TGGGGTAAAAGGTCAC 16 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 37590994 37591007 0.0E+00 GGGGTAAAAGGTCA 14 RORA_2_MA0072.1 JASPAR + 37590844 37590857 6.0E-06 TGGAAGTGGGTCAC 14 ONECUT3_CUT_DBD_monomeric_14_1 SELEX + 37594889 37594902 1.0E-06 GAAAAATCAATCAT 14 V_AREB6_01_M00412 TRANSFAC + 37591536 37591548 1.0E-05 TCTTTACCTGTAA 13 V_HNF3B_01_M00131 TRANSFAC + 37590420 37590434 1.0E-05 CGCATTGTTTTATTT 15 V_USF_Q6_M00187 TRANSFAC + 37590853 37590862 2.0E-06 GTCACGTGGC 10 V_RHOX11_01_M01347 TRANSFAC - 37591891 37591907 7.0E-06 TGGTAGCTGTAATTTAA 17 V_RORA1_01_M00156 TRANSFAC - 37591262 37591274 1.0E-06 TTAACAAGGTCAC 13 V_MAFB_05_M02775 TRANSFAC + 37590477 37590493 6.0E-06 ATATTTACTGACAAATA 17 V_ETS_B_M00340 TRANSFAC - 37591721 37591734 7.0E-06 GAGAGGAAGTGGCT 14 V_HOXA13_02_M01297 TRANSFAC - 37590426 37590434 1.0E-06 AAATAAAAC 9 V_IK_Q5_M01169 TRANSFAC - 37590658 37590667 6.0E-06 TTTGGGAGAG 10 V_EBOX_Q6_01_M01034 TRANSFAC - 37590800 37590809 2.0E-06 CCACGTGACC 10 V_EBOX_Q6_01_M01034 TRANSFAC - 37590852 37590861 2.0E-06 CCACGTGACC 10 V_LBX2_01_M01401 TRANSFAC + 37590305 37590321 7.0E-06 TACCTTAATTGATCTAC 17 V_SP1_Q6_01_M00931 TRANSFAC + 37590815 37590824 4.0E-06 GGGGCGGGGC 10 V_MEF2_02_M00231 TRANSFAC - 37590507 37590528 1.0E-05 TTGAAGGGTAATAATAGGAACT 22 V_NR2F2_03_M02783 TRANSFAC + 37590715 37590730 4.0E-06 CGTAAAAGGTCACCTG 16 V_NR2F2_03_M02783 TRANSFAC - 37590990 37591005 1.0E-06 GGTAAAAGGTCACGAG 16 V_HNF4ALPHA_Q6_M00638 TRANSFAC - 37590715 37590727 6.0E-06 GTGACCTTTTACG 13 V_HNF4ALPHA_Q6_M00638 TRANSFAC + 37590993 37591005 3.0E-06 GTGACCTTTTACC 13 V_SP1_03_M02281 TRANSFAC - 37590814 37590823 7.0E-06 CCCCGCCCCC 10 V_HNF4A_03_M02220 TRANSFAC - 37590994 37591006 8.0E-06 GGGTAAAAGGTCA 13 V_GKLF_02_M01588 TRANSFAC + 37590936 37590947 4.0E-06 GCCACGCCCTCC 12 V_DLX2_01_M01468 TRANSFAC - 37591655 37591670 8.0E-06 ACAACAATTATCCTAA 16 V_PPAR_DR1_Q2_M00763 TRANSFAC + 37590994 37591006 1.0E-06 TGACCTTTTACCC 13 V_SP1_02_M01303 TRANSFAC - 37590356 37590366 5.0E-06 GGGGTGGGGTG 11 V_PU1_Q4_M01172 TRANSFAC + 37591718 37591736 1.0E-06 GCCAGCCACTTCCTCTCTT 19 V_LYF1_01_M00141 TRANSFAC - 37590659 37590667 3.0E-06 TTTGGGAGA 9 V_HOXA13_03_M01430 TRANSFAC + 37590709 37590724 3.0E-06 CACGCTCGTAAAAGGT 16 V_CDX_Q5_M00991 TRANSFAC + 37594747 37594764 3.0E-06 ACCAGTAAAATTTTTAAA 18 V_HOXC13_01_M01317 TRANSFAC + 37590709 37590724 6.0E-06 CACGCTCGTAAAAGGT 16 V_REX1_01_M01695 TRANSFAC - 37590786 37590795 7.0E-06 TCAGCCATTT 10 V_PPARGRXRA_01_M02262 TRANSFAC - 37590994 37591008 7.0E-06 TGGGGTAAAAGGTCA 15 V_ETS_Q4_M00771 TRANSFAC + 37591721 37591732 2.0E-06 AGCCACTTCCTC 12 V_HNF6_Q6_M00639 TRANSFAC + 37594890 37594901 0.0E+00 AAAAATCAATCA 12 V_LHX61_01_M01314 TRANSFAC + 37590304 37590320 7.0E-06 CTACCTTAATTGATCTA 17 V_LHX61_01_M01314 TRANSFAC - 37590305 37590321 6.0E-06 GTAGATCAATTAAGGTA 17 V_ELF4_04_M02850 TRANSFAC - 37594751 37594767 6.0E-06 GTTTTTAAAAATTTTAC 17 V_GC_01_M00255 TRANSFAC + 37590813 37590826 8.0E-06 CGGGGGCGGGGCCG 14 V_GC_01_M00255 TRANSFAC + 37590883 37590896 9.0E-06 TGGGGGCGTGGCCG 14 V_SOX7_03_M02807 TRANSFAC - 37590414 37590435 4.0E-06 CAAATAAAACAATGCGAAATGA 22 V_SOX7_03_M02807 TRANSFAC + 37591551 37591572 7.0E-06 TGGGCAGAACAATAGCTTCTAT 22 V_SOX7_03_M02807 TRANSFAC - 37591654 37591675 6.0E-06 AGTGGACAACAATTATCCTAAA 22 V_HELIOSA_02_M01004 TRANSFAC + 37591654 37591664 7.0E-06 TTTAGGATAAT 11 V_HELIOSA_02_M01004 TRANSFAC + 37594884 37594894 1.0E-06 TCAAGGAAAAA 11 V_SPI1_03_M02078 TRANSFAC - 37591724 37591733 1.0E-06 AGAGGAAGTG 10 V_ARX_01_M01423 TRANSFAC - 37590305 37590321 5.0E-06 GTAGATCAATTAAGGTA 17 V_STAF_01_M00262 TRANSFAC + 37590594 37590615 8.0E-06 TTAATCCAGAAAGCACTGCTTC 22 V_SOX1_04_M02906 TRANSFAC + 37591658 37591672 4.0E-06 GGATAATTGTTGTCC 15 V_KROX_Q6_M00982 TRANSFAC - 37590809 37590822 5.0E-06 CCCGCCCCCGAGCC 14 V_RSRFC4_Q2_M00407 TRANSFAC - 37590508 37590524 3.0E-06 AGGGTAATAATAGGAAC 17 V_IRF4_04_M02872 TRANSFAC - 37590532 37590546 9.0E-06 TTTATTCTCAATTTC 15 V_SP1_Q6_M00196 TRANSFAC + 37590813 37590825 1.0E-06 CGGGGGCGGGGCC 13 V_HNF1B_04_M02266 TRANSFAC + 37590587 37590598 7.0E-06 TTCGTATTTAAT 12 V_MAZ_Q6_01_M02023 TRANSFAC - 37590354 37590367 6.0E-06 GGGGGTGGGGTGGA 14 V_NKX25_02_M00241 TRANSFAC + 37590308 37590315 7.0E-06 CTTAATTG 8 V_SOX_Q6_M01014 TRANSFAC + 37591256 37591268 5.0E-06 CTCTTTGTGACCT 13 V_LEF1_03_M02878 TRANSFAC - 37590306 37590321 6.0E-06 GTAGATCAATTAAGGT 16 V_LEF1_03_M02878 TRANSFAC + 37594890 37594905 9.0E-06 AAAAATCAATCATAGG 16 V_HNF1_Q6_01_M01011 TRANSFAC + 37590531 37590551 8.0E-06 TGAAATTGAGAATAAAACAGA 21 V_SOX18_03_M02801 TRANSFAC + 37590419 37590434 6.0E-06 TCGCATTGTTTTATTT 16 V_SOX18_03_M02801 TRANSFAC + 37591659 37591674 1.0E-05 GATAATTGTTGTCCAC 16 V_PBX1_01_M00096 TRANSFAC + 37594894 37594902 4.0E-06 ATCAATCAT 9 V_YY1_Q6_02_M01035 TRANSFAC - 37590785 37590795 5.0E-06 TCAGCCATTTT 11 V_CDX1_01_M01373 TRANSFAC - 37590510 37590525 7.0E-06 AAGGGTAATAATAGGA 16 V_REX1_03_M01744 TRANSFAC + 37590785 37590796 4.0E-06 AAAATGGCTGAG 12 V_REX1_03_M01744 TRANSFAC + 37591008 37591019 1.0E-06 AACATGGCTGCG 12 V_USF_01_M00121 TRANSFAC + 37590851 37590864 8.0E-06 GGGTCACGTGGCTC 14 V_USF_01_M00121 TRANSFAC - 37590851 37590864 8.0E-06 GAGCCACGTGACCC 14 V_SPIB_01_M01204 TRANSFAC - 37590503 37590519 3.0E-06 AATAATAGGAACTACCT 17 V_RREB1_01_M00257 TRANSFAC - 37590425 37590438 5.0E-06 CCCCAAATAAAACA 14 V_SMAD4_Q6_M00733 TRANSFAC + 37591276 37591290 5.0E-06 GTGGTCCAGCCTCCT 15 V_OCT4_02_M01124 TRANSFAC - 37591750 37591764 1.0E-05 TTTGTGATTGTGATT 15 V_NR1B1_Q6_M02110 TRANSFAC - 37590992 37591001 1.0E-05 AAAGGTCACG 10 V_SOX9_B1_M00410 TRANSFAC - 37590419 37590432 4.0E-06 ATAAAACAATGCGA 14 V_ARX_02_M02945 TRANSFAC - 37590305 37590321 5.0E-06 GTAGATCAATTAAGGTA 17 V_TFIII_Q6_M00706 TRANSFAC + 37590753 37590761 1.0E-05 AGAGGTAGG 9 V_SP4_Q5_M01273 TRANSFAC - 37590814 37590824 1.0E-06 GCCCCGCCCCC 11 V_EN2_01_M01455 TRANSFAC + 37590305 37590321 6.0E-06 TACCTTAATTGATCTAC 17 V_USF_Q6_01_M00796 TRANSFAC - 37590800 37590811 5.0E-06 GCCCACGTGACC 12 V_USF_Q6_01_M00796 TRANSFAC - 37590852 37590863 2.0E-06 AGCCACGTGACC 12 V_GABPBETA_Q3_M01876 TRANSFAC - 37591723 37591733 1.0E-05 AGAGGAAGTGG 11 V_DR1_Q3_M00762 TRANSFAC - 37590994 37591006 1.0E-06 GGGTAAAAGGTCA 13 V_CAAT_C_M00200 TRANSFAC + 37590340 37590364 5.0E-06 GCCAACCCATTCGCTCCACCCCACC 25 V_MYOGNF1_01_M00056 TRANSFAC + 37591700 37591728 4.0E-06 CAGTCCTTCATATTGGCTGCCAGCCACTT 29 NR1H2_RXRA_MA0115.1 JASPAR - 37590992 37591008 1.0E-06 TGGGGTAAAAGGTCACG 17 V_E2F3_03_M02743 TRANSFAC - 37590766 37590780 6.0E-06 AAAAGGGCGCGCTCC 15 V_HDX_01_M01333 TRANSFAC + 37594886 37594902 2.0E-06 AAGGAAAAATCAATCAT 17 V_ERR1_Q2_M00511 TRANSFAC - 37591261 37591274 1.0E-06 TTAACAAGGTCACA 14 V_SPIC_02_M02077 TRANSFAC - 37591724 37591733 3.0E-06 AGAGGAAGTG 10 V_PBX1_02_M00124 TRANSFAC + 37594891 37594905 3.0E-06 AAAATCAATCATAGG 15 V_PBX1_03_M01017 TRANSFAC + 37594892 37594903 0.0E+00 AAATCAATCATA 12 V_RSRFC4_01_M00026 TRANSFAC + 37590509 37590524 5.0E-06 TTCCTATTATTACCCT 16 V_ETS1_B_M00339 TRANSFAC - 37591719 37591733 1.0E-06 AGAGGAAGTGGCTGG 15 V_ZFP281_01_M01597 TRANSFAC - 37590358 37590368 1.0E-06 TGGGGGTGGGG 11 V_IRF1_Q6_01_M01881 TRANSFAC + 37590323 37590336 8.0E-06 CATTTTCAGTCTCT 14 V_RARA_03_M02787 TRANSFAC + 37590715 37590730 1.0E-06 CGTAAAAGGTCACCTG 16 V_RARA_03_M02787 TRANSFAC - 37590990 37591005 1.0E-06 GGTAAAAGGTCACGAG 16 V_PBX_Q3_M00998 TRANSFAC - 37594889 37594900 1.0E-06 GATTGATTTTTC 12 V_SOX2_01_M02246 TRANSFAC - 37591551 37591565 1.0E-05 CTATTGTTCTGCCCA 15 V_SOX2_Q6_M01272 TRANSFAC - 37591554 37591569 4.0E-06 GAAGCTATTGTTCTGC 16 V_PPARG_02_M00515 TRANSFAC + 37590431 37590453 1.0E-06 ATTTGGGGCACTGTGCCGCACTA 23 V_PPARG_02_M00515 TRANSFAC - 37590431 37590453 1.0E-06 TAGTGCGGCACAGTGCCCCAAAT 23 V_BARHL2_01_M01446 TRANSFAC - 37590306 37590321 4.0E-06 GTAGATCAATTAAGGT 16 V_SOX12_03_M02796 TRANSFAC + 37591661 37591674 5.0E-06 TAATTGTTGTCCAC 14 V_CTF1_01_M01196 TRANSFAC - 37591712 37591725 5.0E-06 TGGCTGGCAGCCAA 14 V_SP1_Q2_01_M00933 TRANSFAC - 37590814 37590823 4.0E-06 CCCCGCCCCC 10 V_RXRLXRB_01_M01198 TRANSFAC - 37590994 37591006 1.0E-06 GGGTAAAAGGTCA 13 V_HNF4_01_M00134 TRANSFAC - 37590991 37591009 3.0E-06 TTGGGGTAAAAGGTCACGA 19 V_SP1_Q4_01_M00932 TRANSFAC + 37590813 37590825 1.0E-06 CGGGGGCGGGGCC 13 V_BARX1_01_M01340 TRANSFAC - 37591655 37591670 8.0E-06 ACAACAATTATCCTAA 16 V_PBX1_Q3_M02028 TRANSFAC + 37594894 37594902 9.0E-06 ATCAATCAT 9 V_RHOX11_06_M03100 TRANSFAC - 37591891 37591907 7.0E-06 TGGTAGCTGTAATTTAA 17 V_TCF3_05_M02920 TRANSFAC - 37591647 37591661 3.0E-06 ATCCTAAAAGAAAAT 15 TLX1_NFIC_MA0119.1 JASPAR - 37591712 37591725 5.0E-06 TGGCTGGCAGCCAA 14 V_ARID5A_04_M02840 TRANSFAC - 37590583 37590599 0.0E+00 GATTAAATACGAAATAC 17 V_AR_Q2_M00447 TRANSFAC - 37591556 37591570 0.0E+00 AGAAGCTATTGTTCT 15 V_PAX4_04_M00380 TRANSFAC - 37591639 37591668 0.0E+00 AACAATTATCCTAAAAGAAAATAACACACT 30 V_RORA2_01_M00157 TRANSFAC + 37590845 37590857 6.0E-06 GGAAGTGGGTCAC 13 PPARG_RXRA_MA0065.2 JASPAR - 37590994 37591008 7.0E-06 TGGGGTAAAAGGTCA 15 V_SPIB_03_M02076 TRANSFAC - 37591724 37591733 3.0E-06 AGAGGAAGTG 10 V_NF1_Q6_M00193 TRANSFAC + 37591710 37591727 5.0E-06 TATTGGCTGCCAGCCACT 18 V_TR4_03_M01782 TRANSFAC - 37590994 37591006 1.0E-06 GGGTAAAAGGTCA 13 V_PPARG_01_M00512 TRANSFAC - 37590990 37591010 0.0E+00 GTTGGGGTAAAAGGTCACGAG 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.