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ALX4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 60529 ALX homeobox 4 chr11 - 44331216 - 44336716 44331716 Alx4_homeodomain_DBD_dimeric_13_1 V_ALX4_01_M00619 V_ALX4_02_M01417 V_ALX4_03_M02944 Transcription Factor Binding Sites   Download all TFBS in the ALX4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints IRF7_IRF_DBD_dimeric_14_1 SELEX + 44327392 44327405 1.0E-06 TCGAAAGCGAAAGG 14 IRX2_homeodomain_DBD_dimeric_12_1 SELEX + 44326725 44326736 7.0E-06 ATACATAACAAT 12 IRF8_IRF_full_dimeric_14_1 SELEX + 44327392 44327405 3.0E-06 TCGAAAGCGAAAGG 14 SOX8_HMG_DBD_dimeric_16_1 SELEX + 44326829 44326844 9.0E-06 TAAAATATTGAGTTTT 16 SOX8_HMG_full_dimeric_15_1 SELEX + 44326871 44326885 4.0E-06 AACAACTTTTGTGTT 15 EWSR1-FLI1_MA0149.1 JASPAR - 44331738 44331755 4.0E-06 GGAGGGGAGGAGGGAGAG 18 EWSR1-FLI1_MA0149.1 JASPAR - 44331865 44331882 4.0E-06 GGGAGGGAGGAAAGAGAG 18 EWSR1-FLI1_MA0149.1 JASPAR - 44332007 44332024 5.0E-06 AGGAAGAAGCAAGGCAGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 44332011 44332028 1.0E-06 GGAAAGGAAGAAGCAAGG 18 Pax4_MA0068.1 JASPAR - 44331976 44332005 2.0E-06 AAAAAAATTTACTTATTTTTTTTTTCCGCT 30 Pax4_MA0068.1 JASPAR + 44331983 44332012 1.0E-06 AAAAAAAATAAGTAAATTTTTTTCCCTGCC 30 Pax4_MA0068.1 JASPAR + 44331984 44332013 7.0E-06 AAAAAAATAAGTAAATTTTTTTCCCTGCCT 30 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX + 44334056 44334067 0.0E+00 TGCCCCAGGGCA 12 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX - 44334056 44334067 1.0E-06 TGCCCTGGGGCA 12 IRF1_MA0050.1 JASPAR + 44327394 44327405 5.0E-06 GAAAGCGAAAGG 12 POU3F3_POU_DBD_monomeric_13_1 SELEX + 44331989 44332001 4.0E-06 AATAAGTAAATTT 13 MAX_bHLH_DBD_dimer-of-dimers_17_1 SELEX + 44331123 44331139 4.0E-06 CAGGTGACCCGCACGTG 17 MAX_bHLH_DBD_dimer-of-dimers_17_1 SELEX - 44331123 44331139 6.0E-06 CACGTGCGGGTCACCTG 17 SP1_MA0079.2 JASPAR + 44331036 44331045 7.0E-06 CCCCGCCCCC 10 Lhx3_MA0135.1 JASPAR - 44331989 44332001 8.0E-06 AAATTTACTTATT 13 SP1_C2H2_DBD_monomeric_11_1 SELEX + 44331035 44331045 4.0E-06 ACCCCGCCCCC 11 SOX7_HMG_full_dimeric_17_1 SELEX + 44326870 44326886 2.0E-06 TAACAACTTTTGTGTTT 17 RFX4_RFX_DBD_dimeric_15_1 SELEX + 44327559 44327573 2.0E-06 CGTCGCTGAGAAACG 15 PITX1_homeodomain_full_monomeric_9_1 SELEX + 44326842 44326850 5.0E-06 TTTAATCCA 9 IRF9_IRF_full_trimeric_15_1 SELEX + 44327391 44327405 1.0E-06 ATCGAAAGCGAAAGG 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 44327393 44327407 1.0E-06 CGAAAGCGAAAGGGA 15 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 44335637 44335648 8.0E-06 TGACAGGAATCA 12 TFAP2C_TFAP_full_dimeric_12_1 SELEX - 44334056 44334067 2.0E-06 TGCCCTGGGGCA 12 Myf_MA0055.1 JASPAR - 44331280 44331291 4.0E-06 CAGCAGCAGCAG 12 NR3C1_MA0113.1 JASPAR - 44331991 44332008 5.0E-06 GGGAAAAAAATTTACTTA 18 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 44330880 44330890 5.0E-06 TTTCCCCAAAC 11 IRF4_IRF_full_dimeric_15_1 SELEX + 44327392 44327406 8.0E-06 TCGAAAGCGAAAGGG 15 Sox11_HMG_DBD_dimeric_15_1 SELEX + 44326871 44326885 6.0E-06 AACAACTTTTGTGTT 15 IRF3_IRF_full_trimeric_21_1 SELEX + 44327386 44327406 1.0E-06 ACCGAATCGAAAGCGAAAGGG 21 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX + 44334056 44334067 1.0E-06 TGCCCCAGGGCA 12 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX - 44334056 44334067 2.0E-06 TGCCCTGGGGCA 12 POU3F3_POU_DBD_dimeric_12_1 SELEX + 44331986 44331997 7.0E-06 AAAAATAAGTAA 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 44331984 44331996 3.0E-06 AAAAAAATAAGTA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 44331980 44331992 3.0E-06 GAAAAAAAAAATA 13 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX + 44334056 44334067 1.0E-06 TGCCCCAGGGCA 12 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX - 44334056 44334067 1.0E-06 TGCCCTGGGGCA 12 IRF2_MA0051.1 JASPAR + 44327393 44327410 0.0E+00 CGAAAGCGAAAGGGAAGG 18 SOX9_HMG_full_dimeric_17_1 SELEX + 44326870 44326886 2.0E-06 TAACAACTTTTGTGTTT 17 IRX5_homeodomain_DBD_dimeric_12_1 SELEX + 44326725 44326736 3.0E-06 ATACATAACAAT 12 V_HOXA9_01_M01351 TRANSFAC + 44331908 44331924 6.0E-06 AGGGCAGTAAAAAGATT 17 V_HNF3B_01_M00131 TRANSFAC - 44331983 44331997 1.0E-06 TTACTTATTTTTTTT 15 V_STAT3_01_M00225 TRANSFAC + 44331489 44331509 6.0E-06 TGTCGCCTCCGGGAAATGCCC 21 V_STAT3_01_M00225 TRANSFAC - 44331489 44331509 3.0E-06 GGGCATTTCCCGGAGGCGACA 21 V_ZSCAN4_03_M02838 TRANSFAC + 44326714 44326730 8.0E-06 ACAGTGTACACATACAT 15 V_APOLYA_B_M00310 TRANSFAC - 44328504 44328518 4.0E-06 AATAAACAGCAAGTC 15 V_TCFE2A_04_M02927 TRANSFAC + 44331920 44331936 1.0E-06 AGATTCAGATGTTTCGG 17 V_ATF5_01_M01295 TRANSFAC - 44327406 44327416 6.0E-06 CTTCTCCCTTC 11 V_ZFP410_04_M02936 TRANSFAC - 44331685 44331701 5.0E-06 CCTCGCCTCCCCAAACT 17 V_HMGIY_Q3_M01010 TRANSFAC + 44331991 44332005 8.0E-06 TAAGTAAATTTTTTT 15 V_EVI1_04_M00081 TRANSFAC + 44331983 44331997 4.0E-06 AAAAAAAATAAGTAA 15 V_BCL6_01_M01183 TRANSFAC - 44331982 44331997 0.0E+00 TTACTTATTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 44331988 44332003 8.0E-06 AAATAAGTAAATTTTT 16 V_GM397_03_M02760 TRANSFAC + 44326714 44326730 5.0E-06 ACAGTGTACACATACAT 15 V_FOXJ2_02_M00423 TRANSFAC - 44326829 44326842 1.0E-06 AACTCAATATTTTA 14 V_SP1_Q6_01_M00931 TRANSFAC - 44331035 44331044 7.0E-06 GGGGCGGGGT 10 V_ISL2_01_M01328 TRANSFAC - 44331987 44332002 3.0E-06 AAAATTTACTTATTTT 16 V_IRF2_Q6_M01882 TRANSFAC + 44327392 44327407 0.0E+00 TCGAAAGCGAAAGGGA 16 V_FOXO3A_Q1_M01137 TRANSFAC + 44331985 44331996 8.0E-06 AAAAAATAAGTA 12 V_SOX11_04_M02899 TRANSFAC - 44326726 44326739 0.0E+00 AGAATTGTTATGTA 14 V_HNF3_Q6_01_M01012 TRANSFAC - 44328489 44328506 1.0E-06 GTCAGTGTTTGTTCTTTC 18 V_HNF3_Q6_01_M01012 TRANSFAC - 44331980 44331997 3.0E-06 TTACTTATTTTTTTTTTC 18 V_SP1_03_M02281 TRANSFAC + 44331036 44331045 7.0E-06 CCCCGCCCCC 10 V_SP1_02_M01303 TRANSFAC - 44331034 44331044 3.0E-06 GGGGCGGGGTG 11 V_COUPTF_Q6_M01036 TRANSFAC + 44332058 44332080 4.0E-06 TCCACTGGCCCCTGCCCCCTCCT 23 V_PU1_Q4_M01172 TRANSFAC + 44335443 44335461 6.0E-06 AATCATTTGTTCCTCTATT 19 V_NR3C1_01_M02219 TRANSFAC - 44331991 44332008 5.0E-06 GGGAAAAAAATTTACTTA 18 V_TCFAP2E_04_M02926 TRANSFAC + 44331975 44331988 8.0E-06 CAGCGGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 44331976 44331989 2.0E-06 AGCGGAAAAAAAAA 14 V_CDX_Q5_M00991 TRANSFAC + 44331981 44331998 0.0E+00 AAAAAAAAAATAAGTAAA 18 V_MEF2A_Q6_M02024 TRANSFAC - 44326826 44326835 6.0E-06 TATTTTAAGT 10 V_TCFAP2C_04_M02925 TRANSFAC + 44332133 44332146 8.0E-06 GCGCCCGAGGGCTT 14 V_HNF6_Q6_M00639 TRANSFAC - 44326820 44326831 9.0E-06 TTAAGTCAATCG 12 V_ELF4_04_M02850 TRANSFAC + 44327365 44327381 9.0E-06 TTTCAACAAAAACCTGT 17 V_ELF4_04_M02850 TRANSFAC + 44331977 44331993 1.0E-06 GCGGAAAAAAAAAATAA 17 V_ELF4_04_M02850 TRANSFAC + 44331979 44331995 5.0E-06 GGAAAAAAAAAATAAGT 17 V_GC_01_M00255 TRANSFAC - 44331033 44331046 7.0E-06 TGGGGGCGGGGTGG 14 V_PR_Q2_M00960 TRANSFAC + 44328489 44328498 5.0E-06 GAAAGAACAA 10 V_MYF_01_M01302 TRANSFAC - 44331280 44331291 4.0E-06 CAGCAGCAGCAG 12 V_ZFP105_03_M02827 TRANSFAC + 44331979 44331993 3.0E-06 GGAAAAAAAAAATAA 15 V_ZFP105_03_M02827 TRANSFAC + 44331980 44331994 9.0E-06 GAAAAAAAAAATAAG 15 V_ZFP105_03_M02827 TRANSFAC + 44331982 44331996 2.0E-06 AAAAAAAAATAAGTA 15 V_HNF3G_Q4_M02015 TRANSFAC - 44328494 44328501 7.0E-06 TGTTTGTT 8 V_ARID5A_03_M02736 TRANSFAC + 44326830 44326843 9.0E-06 AAAATATTGAGTTT 14 V_HNF1_Q6_M00790 TRANSFAC - 44331983 44332000 6.0E-06 AATTTACTTATTTTTTTT 18 V_NKX26_01_M01322 TRANSFAC + 44331956 44331971 9.0E-06 AAACCCTCTTAAGGTT 16 V_KROX_Q6_M00982 TRANSFAC + 44331037 44331050 1.0E-05 CCCGCCCCCAGCCC 14 V_PXRRXR_02_M01153 TRANSFAC + 44333914 44333921 1.0E-05 AGAGTTCA 8 V_SP1_Q6_M00196 TRANSFAC - 44331034 44331046 3.0E-06 TGGGGGCGGGGTG 13 V_IRF3_Q3_M01279 TRANSFAC - 44327395 44327407 1.0E-06 TCCCTTTCGCTTT 13 V_HNF3_Q6_M00791 TRANSFAC + 44328491 44328503 2.0E-06 AAGAACAAACACT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 44328491 44328501 2.0E-06 TGTTTGTTCTT 11 V_IRF_Q6_M00772 TRANSFAC - 44327394 44327408 6.0E-06 TTCCCTTTCGCTTTC 15 V_HNF1_Q6_01_M01011 TRANSFAC - 44326857 44326877 1.0E-05 AGTTGTTAAATAGAAAAACAG 21 V_HNF1_Q6_01_M01011 TRANSFAC + 44331982 44332002 2.0E-06 AAAAAAAAATAAGTAAATTTT 21 V_PAX5_01_M00143 TRANSFAC + 44335501 44335528 3.0E-06 TTCTTAAGCAAGGATGTAGGGCATCCTT 28 V_SOX18_03_M02801 TRANSFAC - 44326725 44326740 3.0E-06 AAGAATTGTTATGTAT 16 V_ISRE_01_M00258 TRANSFAC - 44330904 44330918 8.0E-06 GAGTTTGTTTTTCCC 15 V_GR_Q6_M00192 TRANSFAC + 44335686 44335704 1.0E-05 TTACTTCACTGTGTACTGG 19 V_SOX12_04_M02900 TRANSFAC - 44331781 44331796 9.0E-06 AGACAGAGAAAGAAGA 16 V_IRF4_03_M02768 TRANSFAC + 44327388 44327402 9.0E-06 CGAATCGAAAGCGAA 15 V_XFD2_01_M00268 TRANSFAC - 44328507 44328520 5.0E-06 ACAATAAACAGCAA 14 V_NKX3A_01_M00451 TRANSFAC + 44331988 44331999 1.0E-06 AAATAAGTAAAT 12 V_SRF_Q5_02_M01007 TRANSFAC - 44331503 44331521 7.0E-06 CGTCGCCTTTTAGGGCATT 19 V_TCF1_07_M02919 TRANSFAC - 44326842 44326855 6.0E-06 GGGCCTGGATTAAA 14 V_SP1_01_M00008 TRANSFAC - 44331035 44331044 3.0E-06 GGGGCGGGGT 10 V_OCT4_02_M01124 TRANSFAC + 44333895 44333909 5.0E-06 TTTGTCTGGCTAATG 15 V_FOXO1_Q5_M01216 TRANSFAC - 44326856 44326864 1.0E-05 AAAAACAGA 9 V_FOXO1_Q5_M01216 TRANSFAC + 44330907 44330915 1.0E-06 AAAAACAAA 9 V_SOX17_04_M02904 TRANSFAC + 44326719 44326735 7.0E-06 GTACACATACATAACAA 17 V_MTF1_06_M02882 TRANSFAC + 44331981 44331994 4.0E-06 AAAAAAAAAATAAG 14 V_AP4_01_M00005 TRANSFAC + 44328468 44328485 1.0E-05 AGACTCAGCTGCTGAGAG 18 V_OSR2_04_M02889 TRANSFAC + 44332095 44332110 5.0E-06 AGATGCTACTAACTCG 16 V_CAAT_C_M00200 TRANSFAC - 44330862 44330886 1.0E-06 CCCAAACCGCTCGCTTTGCGCTGCC 25 V_SMAD3_03_M02794 TRANSFAC - 44333892 44333908 7.0E-06 ATTAGCCAGACAAAAGT 17 V_TCFAP2B_03_M02820 TRANSFAC + 44334055 44334068 1.0E-06 TTGCCCCAGGGCAG 14 V_TCFAP2B_03_M02820 TRANSFAC - 44334055 44334068 5.0E-06 CTGCCCTGGGGCAA 14 V_FPM315_01_M01587 TRANSFAC - 44331742 44331753 4.0E-06 AGGGGAGGAGGG 12 V_HNF1B_01_M01425 TRANSFAC + 44332509 44332525 6.0E-06 TCTTGTTAACTATTTCC 17 V_ZFP281_01_M01597 TRANSFAC - 44331036 44331046 6.0E-06 TGGGGGCGGGG 11 V_OSR1_04_M02888 TRANSFAC + 44332095 44332110 4.0E-06 AGATGCTACTAACTCG 16 V_SOX21_04_M02907 TRANSFAC + 44335443 44335459 2.0E-06 AATCATTTGTTCCTCTA 17 V_SOX8_03_M02808 TRANSFAC - 44326726 44326742 1.0E-06 GGAAGAATTGTTATGTA 17 V_TCFAP2A_03_M02819 TRANSFAC - 44331490 44331504 5.0E-06 TTTCCCGGAGGCGAC 15 V_SRF_06_M02916 TRANSFAC + 44331977 44331993 0.0E+00 GCGGAAAAAAAAAATAA 17 V_SRF_06_M02916 TRANSFAC + 44331979 44331995 1.0E-06 GGAAAAAAAAAATAAGT 17 V_SRF_06_M02916 TRANSFAC + 44331980 44331996 0.0E+00 GAAAAAAAAAATAAGTA 17 V_SRF_06_M02916 TRANSFAC + 44331981 44331997 9.0E-06 AAAAAAAAAATAAGTAA 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 44331738 44331755 4.0E-06 GGAGGGGAGGAGGGAGAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 44331865 44331882 4.0E-06 GGGAGGGAGGAAAGAGAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 44332007 44332024 5.0E-06 AGGAAGAAGCAAGGCAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 44332011 44332028 1.0E-06 GGAAAGGAAGAAGCAAGG 18 V_FOXJ2_01_M00422 TRANSFAC - 44328506 44328523 2.0E-06 CAAACAATAAACAGCAAG 18 V_FOXO1_04_M01969 TRANSFAC + 44327366 44327385 3.0E-06 TTCAACAAAAACCTGTCGCC 20 V_PAX4_02_M00377 TRANSFAC - 44331994 44332004 7.0E-06 AAAAAATTTAC 11 V_SOX12_03_M02796 TRANSFAC - 44326725 44326738 7.0E-06 GAATTGTTATGTAT 14 V_SP1_Q2_01_M00933 TRANSFAC + 44331036 44331045 4.0E-06 CCCCGCCCCC 10 V_FOXO4_01_M00472 TRANSFAC + 44330907 44330917 3.0E-06 AAAAACAAACT 11 V_SOX5_07_M02909 TRANSFAC - 44326726 44326742 0.0E+00 GGAAGAATTGTTATGTA 17 V_SOX5_07_M02909 TRANSFAC - 44326866 44326882 8.0E-06 ACAAAAGTTGTTAAATA 17 V_SP1_Q4_01_M00932 TRANSFAC - 44331034 44331046 9.0E-06 TGGGGGCGGGGTG 13 V_TCF3_05_M02920 TRANSFAC + 44331976 44331990 0.0E+00 AGCGGAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 44331977 44331991 1.0E-06 GCGGAAAAAAAAAAT 15 V_PAX4_04_M00380 TRANSFAC + 44331982 44332011 9.0E-06 AAAAAAAAATAAGTAAATTTTTTTCCCTGC 30 V_OCT4_01_M01125 TRANSFAC - 44326723 44326737 7.0E-06 AATTGTTATGTATGT 15

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