Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

RNF2


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
6045 ring finger protein 2 chr1 +185009550 - 185015050 185014550

Transcription Factor Binding Sites

 
Download all TFBS in the RNF2 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
TBX20_TBX_full_monomeric_11_1 SELEX + 185014313 185014323 4.0E-06 AAGGTGTAAAG 11
TBX20_TBX_full_monomeric_11_1 SELEX - 185015366 185015376 7.0E-06 AATGTGTGAAG 11
SP8_C2H2_DBD_monomeric_12_1 SELEX - 185014433 185014444 2.0E-06 GCCACGCCCCCC 12
SP3_C2H2_DBD_monomeric_11_1 SELEX - 185014434 185014444 3.0E-06 GCCACGCCCCC 11
HOXA10_homeodomain_DBD_monomeric_12_1 SELEX + 185009693 185009704 8.0E-06 GGTCGTAAATCT 12
KLF16_C2H2_DBD_monomeric_11_1 SELEX - 185014434 185014444 1.0E-06 GCCACGCCCCC 11
FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 185009635 185009646 8.0E-06 AATACAAATAAA 12
KLF14_C2H2_DBD_monomeric_14_1 SELEX - 185014432 185014445 1.0E-06 GGCCACGCCCCCCC 14
HINFP1_C2H2_full_dimeric_20_1 SELEX + 185014697 185014716 4.0E-06 GCGGCGGCGCCGGCGTCCGC 20
HINFP1_C2H2_full_monomeric_12_1 SELEX + 185014707 185014718 1.0E-05 CGGCGTCCGCGG 12
EWSR1-FLI1_MA0149.1 JASPAR + 185015006 185015023 5.0E-06 GGAGGGAAGGGAGCTGGT 18
HOXC11_homeodomain_full_monomeric_11_1 SELEX + 185009693 185009703 4.0E-06 GGTCGTAAATC 11
RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 185014194 185014211 5.0E-06 AAGTTCATGTGAAGTTCT 18
ZNF740_C2H2_full_monomeric_10_1 SELEX - 185014881 185014890 3.0E-06 CCCCCCCCAC 10
Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX + 185014195 185014211 9.0E-06 AGTTCATGTGAAGTTCT 17
SP1_MA0079.2 JASPAR - 185015453 185015462 3.0E-06 CCCCTCCCCC 10
FOXI1_MA0042.1 JASPAR - 185009636 185009647 3.0E-06 TTTTATTTGTAT 12
FOXI1_MA0042.1 JASPAR + 185014161 185014172 1.0E-05 GTATGTTTGTTG 12
SP4_C2H2_full_monomeric_17_1 SELEX - 185014431 185014447 6.0E-06 CCGGCCACGCCCCCCCG 17
NFATC1_NFAT_full_dimeric_20_1 SELEX + 185014098 185014117 2.0E-06 AGTGGAAGGTCATTTTCCCA 20
SP1_C2H2_DBD_monomeric_11_1 SELEX - 185014434 185014444 5.0E-06 GCCACGCCCCC 11
SP1_C2H2_DBD_monomeric_11_1 SELEX - 185015247 185015257 7.0E-06 ACCCCACCCCC 11
TEAD3_TEA_DBD_dimeric_17_1 SELEX + 185015372 185015388 8.0E-06 ACATTCCTGGAGTGCCG 17
POU1F1_POU_DBD_monomeric_17_1 SELEX + 185014626 185014642 3.0E-06 CTCATGAATATTGAGCG 17
TBX21_TBX_full_monomeric_10_1 SELEX - 185015367 185015376 4.0E-06 AATGTGTGAA 10
Hoxa11_homeodomain_DBD_monomeric_12_1 SELEX + 185009693 185009704 2.0E-06 GGTCGTAAATCT 12
Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX - 185013285 185013295 9.0E-06 TTCAAGGTTAA 11
TFAP2C_TFAP_full_dimeric_12_1 SELEX - 185014398 185014409 8.0E-06 AGCCCCCGGGCA 12
ETS1_ETS_full_dimeric_18_1 SELEX + 185015049 185015066 8.0E-06 GCCGGGATTCCTTCCTTC 18
Zfp740_C2H2_DBD_monomeric_10_1 SELEX - 185014881 185014890 5.0E-06 CCCCCCCCAC 10
HOXD12_homeodomain_DBD_monomeric_11_1 SELEX + 185009693 185009703 4.0E-06 GGTCGTAAATC 11
HOXC12_homeodomain_DBD_monomeric_11_1 SELEX + 185009693 185009703 6.0E-06 GGTCGTAAATC 11
RREB1_MA0073.1 JASPAR - 185014878 185014897 8.0E-06 ACACACACCCCCCCCACACT 20
RREB1_MA0073.1 JASPAR - 185015454 185015473 5.0E-06 AACCAAGACACCCCCTCCCC 20
V_MEQ_01_M02049 TRANSFAC - 185015230 185015238 9.0E-06 GACACACAT 9
RXR_RAR_DR5_MA0159.1 JASPAR + 185014195 185014211 5.0E-06 AGTTCATGTGAAGTTCT 17
V_AP2ALPHA_Q6_M01857 TRANSFAC - 185014399 185014409 9.0E-06 AGCCCCCGGGC 11
V_FREAC7_01_M00293 TRANSFAC + 185009633 185009648 8.0E-06 GAAATACAAATAAAAC 16
V_BCL6_Q3_01_M02085 TRANSFAC + 185015416 185015425 5.0E-06 CTTTCTAAAA 10
V_RHOX11_01_M01347 TRANSFAC + 185014310 185014326 3.0E-06 AGGAAGGTGTAAAGGGT 17
V_LRH1_Q5_01_M02098 TRANSFAC - 185013286 185013296 3.0E-06 CTTCAAGGTTA 11
V_HOXA13_02_M01297 TRANSFAC + 185009640 185009648 1.0E-06 AAATAAAAC 9
V_TBR2_01_M01774 TRANSFAC - 185015367 185015375 8.0E-06 ATGTGTGAA 9
V_ZFP740_03_M02834 TRANSFAC - 185014878 185014893 7.0E-06 ACACCCCCCCCACACT 16
V_SP1_03_M02281 TRANSFAC - 185015453 185015462 3.0E-06 CCCCTCCCCC 10
V_HFH4_01_M00742 TRANSFAC - 185009635 185009647 7.0E-06 TTTTATTTGTATT 13
V_HOXD13_01_M01404 TRANSFAC + 185009636 185009651 6.0E-06 ATACAAATAAAACTTC 16
V_TCFAP2E_04_M02926 TRANSFAC - 185009675 185009688 6.0E-06 CAGCTGAAAAAATA 14
V_RHOX11_02_M01384 TRANSFAC + 185014310 185014326 8.0E-06 AGGAAGGTGTAAAGGGT 17
V_TAL1_GATA1_01_M02243 TRANSFAC + 185013299 185013316 1.0E-06 CTTGTAGAGTCAGATAAC 18
V_PPARGRXRA_01_M02262 TRANSFAC - 185015083 185015097 7.0E-06 GCAGAGGAAAGGGCA 15
V_ELF4_04_M02850 TRANSFAC + 185009635 185009651 5.0E-06 AATACAAATAAAACTTC 17
V_TST1_01_M00133 TRANSFAC + 185014119 185014133 1.0E-06 GAGCAATTACACTTG 15
V_ZNF219_01_M01122 TRANSFAC - 185014881 185014892 3.0E-06 CACCCCCCCCAC 12
V_HNF3G_Q4_M02015 TRANSFAC + 185014164 185014171 7.0E-06 TGTTTGTT 8
V_SOX8_04_M02912 TRANSFAC - 185014623 185014636 1.0E-06 ATATTCATGAGAGA 14
V_HIC1_03_M01073 TRANSFAC + 185014392 185014409 5.0E-06 GGGCGTTGCCCGGGGGCT 18
V_HES1_Q2_M01009 TRANSFAC + 185009655 185009669 3.0E-06 AGAGCTTGTGGCTAG 15
V_HOXD12_01_M01380 TRANSFAC + 185009690 185009706 1.0E-06 AAAGGTCGTAAATCTCA 17
V_MAZ_Q6_01_M02023 TRANSFAC + 185015003 185015016 0.0E+00 GTGGGAGGGAAGGG 14
V_HNF3_Q6_M00791 TRANSFAC + 185009634 185009646 2.0E-06 AAATACAAATAAA 13
V_HNF3ALPHA_Q6_M00724 TRANSFAC - 185009634 185009644 3.0E-06 TATTTGTATTT 11
V_HOXC11_01_M01329 TRANSFAC + 185009690 185009705 1.0E-06 AAAGGTCGTAAATCTC 16
V_HOXD11_01_M01434 TRANSFAC + 185009690 185009706 1.0E-06 AAAGGTCGTAAATCTCA 17
V_CDX1_01_M01373 TRANSFAC + 185009690 185009705 3.0E-06 AAAGGTCGTAAATCTC 16
Tal1_Gata1_MA0140.1 JASPAR + 185013299 185013316 1.0E-06 CTTGTAGAGTCAGATAAC 18
V_HOXC12_01_M01437 TRANSFAC + 185009690 185009706 1.0E-06 AAAGGTCGTAAATCTCA 17
V_MUSCLE_INI_B_M00321 TRANSFAC - 185014870 185014890 1.0E-06 CCCCCCCCACACTCCGGGGCC 21
V_DAX1_01_M01248 TRANSFAC + 185014096 185014115 1.0E-06 AGAGTGGAAGGTCATTTTCC 20
V_RREB1_01_M00257 TRANSFAC - 185014884 185014897 8.0E-06 ACACACACCCCCCC 14
V_HOXA11_01_M01378 TRANSFAC + 185009690 185009705 0.0E+00 AAAGGTCGTAAATCTC 16
V_STAF_02_M00264 TRANSFAC + 185014654 185014674 3.0E-06 ATTTCCCGAGCTCCATTGCGG 21
V_HOXD9_Q2_M01834 TRANSFAC + 185009638 185009647 8.0E-06 ACAAATAAAA 10
V_SF1_Q6_01_M01132 TRANSFAC + 185013286 185013294 9.0E-06 TAACCTTGA 9
V_PTF1BETA_Q6_M00657 TRANSFAC - 185015081 185015094 7.0E-06 GAGGAAAGGGCAGC 14
V_CIZ_01_M00734 TRANSFAC - 185009675 185009683 3.0E-06 GAAAAAATA 9
V_MTF1_06_M02882 TRANSFAC + 185009634 185009647 5.0E-06 AAATACAAATAAAA 14
V_TEF1_Q6_03_M01817 TRANSFAC - 185015372 185015380 9.0E-06 CAGGAATGT 9
V_RHOX11_05_M03099 TRANSFAC + 185014310 185014326 8.0E-06 AGGAAGGTGTAAAGGGT 17
V_FOX_Q2_M00809 TRANSFAC + 185014161 185014173 7.0E-06 GTATGTTTGTTGT 13
V_ZFP281_01_M01597 TRANSFAC + 185015246 185015256 1.0E-06 TGGGGGTGGGG 11
V_ZFP281_01_M01597 TRANSFAC + 185015452 185015462 2.0E-06 GGGGGGAGGGG 11
V_RXR_RAR_01_M02272 TRANSFAC + 185014195 185014211 5.0E-06 AGTTCATGTGAAGTTCT 17
V_ZFP281_04_M02831 TRANSFAC - 185015450 185015464 1.0E-06 ACCCCCTCCCCCCAC 15
V_HFH3_01_M00289 TRANSFAC - 185009635 185009647 2.0E-06 TTTTATTTGTATT 13
V_HFH3_01_M00289 TRANSFAC + 185014161 185014173 8.0E-06 GTATGTTTGTTGT 13
V_EWSR1FLI1_01_M02252 TRANSFAC + 185015006 185015023 5.0E-06 GGAGGGAAGGGAGCTGGT 18
V_FOXJ2_01_M00422 TRANSFAC + 185009632 185009649 8.0E-06 TGAAATACAAATAAAACT 18
V_HOXC10_01_M01361 TRANSFAC + 185009690 185009705 1.0E-06 AAAGGTCGTAAATCTC 16
V_ARP1_01_M00155 TRANSFAC - 185012121 185012136 0.0E+00 TGAGTCCTTGAACTGA 16
V_TFE_Q6_M01029 TRANSFAC + 185014198 185014205 1.0E-05 TCATGTGA 8
V_TAACC_B_M00331 TRANSFAC + 185014273 185014295 1.0E-06 GAGAAAGAAGTCTGAGCCCAAAC 23
V_RHOX11_06_M03100 TRANSFAC + 185014310 185014326 3.0E-06 AGGAAGGTGTAAAGGGT 17
V_ARID5A_04_M02840 TRANSFAC + 185009630 185009646 9.0E-06 GCTGAAATACAAATAAA 17
PPARG_RXRA_MA0065.2 JASPAR - 185015083 185015097 7.0E-06 GCAGAGGAAAGGGCA 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL