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RLF Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6018 rearranged L-myc fusion chr1 + 40622040 - 40627540 40627040 Transcription Factor Binding Sites   Download all TFBS in the RLF promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 40622234 40622251 1.0E-06 AAAGCAAATATTTAAGAT 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 40622234 40622251 3.0E-06 ATCTTAAATATTTGCTTT 18 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 40626785 40626795 6.0E-06 TTCAAATGTCA 11 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 40622234 40622245 9.0E-06 AAAGCAAATATT 12 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX + 40626782 40626795 3.0E-06 CAGTTCAAATGTCA 14 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX + 40626782 40626795 4.0E-06 CAGTTCAAATGTCA 14 SOX8_HMG_full_dimeric_15_1 SELEX + 40628673 40628687 7.0E-06 AGGAATGACAGTATT 15 ISL2_homeodomain_DBD_monomeric_8_1 SELEX + 40629980 40629987 1.0E-05 GCACTTAA 8 NKX3-2_homeodomain_DBD_monomeric_9_1 SELEX + 40629979 40629987 7.0E-06 AGCACTTAA 9 Pax4_MA0068.1 JASPAR - 40628660 40628689 8.0E-06 GAAATACTGTCATTCCTACCACCTCCCACC 30 HMX3_homeodomain_DBD_monomeric_11_1 SELEX + 40629979 40629989 3.0E-06 AGCACTTAAAA 11 HIC2_C2H2_DBD_monomeric_9_1 SELEX - 40626865 40626873 1.0E-05 ATGCCCACC 9 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX + 40626782 40626796 1.0E-05 CAGTTCAAATGTCAT 15 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX + 40626782 40626795 7.0E-06 CAGTTCAAATGTCA 14 YY2_C2H2_full_monomeric_11_1 SELEX - 40627069 40627079 2.0E-06 TCCGCCATCTT 11 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX + 40626782 40626796 3.0E-06 CAGTTCAAATGTCAT 15 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 40626838 40626853 6.0E-06 GAGGTCATGGGATCAC 16 PRDM4_C2H2_full_monomeric_13_1 SELEX + 40626747 40626759 7.0E-06 TTTCAGGGCTACC 13 NKX2-3_homeodomain_full_monomeric_10_1 SELEX + 40629979 40629988 4.0E-06 AGCACTTAAA 10 Foxd3_MA0041.1 JASPAR - 40622235 40622246 5.0E-06 AAATATTTGCTT 12 HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 40629979 40629989 2.0E-06 AGCACTTAAAA 11 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX + 40626782 40626795 7.0E-06 CAGTTCAAATGTCA 14 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX - 40626846 40626864 6.0E-06 TAGACCCCTTTGAGGTCAT 19 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 40622231 40622243 7.0E-06 AAGAAAGCAAATA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 40626701 40626713 9.0E-06 AAATAAGCAAAGA 13 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX + 40626782 40626795 4.0E-06 CAGTTCAAATGTCA 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 40628112 40628124 9.0E-06 ACAAATACAAATA 13 NFE2L2_MA0150.1 JASPAR - 40627023 40627033 9.0E-06 GTGACTCAGCC 11 HMX1_homeodomain_DBD_monomeric_11_1 SELEX + 40629979 40629989 3.0E-06 AGCACTTAAAA 11 V_FOXP1_01_M00987 TRANSFAC + 40628089 40628108 3.0E-06 TTCTGTATGTTTTCAAGTCT 20 V_AP2ALPHA_Q6_M01857 TRANSFAC - 40627005 40627015 6.0E-06 TGCCCCCGGCC 11 V_HNF3B_01_M00131 TRANSFAC - 40622234 40622248 0.0E+00 TTAAATATTTGCTTT 15 V_USF_Q6_M00187 TRANSFAC + 40627029 40627038 2.0E-06 GTCACGTGGC 10 V_MAX_Q6_M01830 TRANSFAC - 40627030 40627041 4.0E-06 CAAGCCACGTGA 12 V_NRSF_Q4_M01028 TRANSFAC + 40627097 40627115 1.0E-05 CCGCTGTCGCCGGGGCTGG 19 V_FOXD3_01_M00130 TRANSFAC - 40622235 40622246 4.0E-06 AAATATTTGCTT 12 V_BCL6_01_M01183 TRANSFAC + 40628556 40628571 8.0E-06 TATTTTACAGATTTTT 16 V_MAFB_05_M02775 TRANSFAC - 40628540 40628556 1.0E-05 AAATGAGCTTACTAAAC 17 V_EBOX_Q6_01_M01034 TRANSFAC - 40627028 40627037 4.0E-06 CCACGTGACT 10 V_NFAT3_Q3_M01734 TRANSFAC + 40626708 40626717 3.0E-06 TTATTTTCCT 10 V_RFX4_03_M02789 TRANSFAC - 40626886 40626900 1.0E-05 CAGCCTAGCAACAAC 15 V_HNF3_Q6_01_M01012 TRANSFAC - 40622231 40622248 0.0E+00 TTAAATATTTGCTTTCTT 18 V_HNF3_Q6_01_M01012 TRANSFAC - 40628112 40628129 8.0E-06 GCCAATATTTGTATTTGT 18 V_STAT6_01_M00494 TRANSFAC + 40628684 40628691 7.0E-06 TATTTCCA 8 V_GABPA_04_M02858 TRANSFAC + 40626790 40626805 4.0E-06 ATGTCATCCCCCTCAA 16 V_GABPA_04_M02858 TRANSFAC - 40627060 40627075 1.0E-05 CCATCTTCCCACGGCC 16 V_HFH4_01_M00742 TRANSFAC - 40622234 40622246 7.0E-06 AAATATTTGCTTT 13 V_PU1_Q4_M01172 TRANSFAC - 40630018 40630036 7.0E-06 TTAGTTTATTTCTTGATTT 19 V_CDX_Q5_M00991 TRANSFAC + 40630015 40630032 3.0E-06 ACCAAATCAAGAAATAAA 18 V_LXRB_RXRA_Q5_M02021 TRANSFAC - 40626840 40626854 6.0E-06 TGAGGTCATGGGATC 15 V_ELF4_04_M02850 TRANSFAC + 40628109 40628125 9.0E-06 TTTACAAATACAAATAT 17 V_ARID5A_03_M02736 TRANSFAC + 40622238 40622251 7.0E-06 CAAATATTTAAGAT 14 V_RFX1_01_M00280 TRANSFAC - 40626887 40626903 1.0E-05 CAACAGCCTAGCAACAA 17 Ddit3_Cebpa_MA0019.1 JASPAR - 40630007 40630018 3.0E-06 TGGTGCAATCCC 12 V_NKX52_01_M01315 TRANSFAC - 40627626 40627642 1.0E-06 ACAAGCAATCAATCCCT 17 V_CMYB_01_M00004 TRANSFAC + 40628647 40628664 3.0E-06 TGAACTTACAGTTGGTGG 18 V_HOX13_01_M00023 TRANSFAC - 40628691 40628720 3.0E-06 CTCCTTTTCCATCATTACCAAAACCGCACT 30 V_YY1_Q6_02_M01035 TRANSFAC - 40627069 40627079 7.0E-06 TCCGCCATCTT 11 V_OCT1_04_M00138 TRANSFAC - 40628551 40628573 0.0E+00 GTAAAAATCTGTAAAATAAATGA 23 V_REX1_03_M01744 TRANSFAC + 40627069 40627080 2.0E-06 AAGATGGCGGAC 12 V_IK2_01_M00087 TRANSFAC + 40630003 40630014 6.0E-06 CTTTGGGATTGC 12 V_USF_01_M00121 TRANSFAC + 40627027 40627040 9.0E-06 GAGTCACGTGGCTT 14 V_USF_01_M00121 TRANSFAC - 40627027 40627040 9.0E-06 AAGCCACGTGACTC 14 V_HMX1_02_M01481 TRANSFAC - 40627626 40627642 3.0E-06 ACAAGCAATCAATCCCT 17 V_PNR_01_M01650 TRANSFAC + 40626782 40626795 3.0E-06 CAGTTCAAATGTCA 14 V_HFH1_01_M00129 TRANSFAC - 40630026 40630037 6.0E-06 GTTAGTTTATTT 12 V_STAT4_Q5_M02117 TRANSFAC + 40629984 40629993 2.0E-06 TTAAAAGAAA 10 V_USF_Q6_01_M00796 TRANSFAC - 40627028 40627039 2.0E-06 AGCCACGTGACT 12 V_ATF1_Q6_M00691 TRANSFAC - 40622130 40622140 2.0E-06 CTCTCACGTCA 11 V_MTF1_06_M02882 TRANSFAC + 40630019 40630032 5.0E-06 AATCAAGAAATAAA 14 V_T3R_01_M00239 TRANSFAC - 40626842 40626857 1.0E-06 CTTTGAGGTCATGGGA 16 V_DR1_Q3_M00762 TRANSFAC + 40626783 40626795 6.0E-06 AGTTCAAATGTCA 13 V_MAX_01_M00119 TRANSFAC + 40627027 40627040 7.0E-06 GAGTCACGTGGCTT 14 V_MAX_01_M00119 TRANSFAC - 40627027 40627040 7.0E-06 AAGCCACGTGACTC 14 V_NRSF_01_M00256 TRANSFAC - 40627096 40627116 1.0E-05 CCCAGCCCCGGCGACAGCGGC 21 V_PBX_Q3_M00998 TRANSFAC + 40627629 40627640 7.0E-06 GATTGATTGCTT 12 V_FOXJ2_01_M00422 TRANSFAC + 40622231 40622248 0.0E+00 AAGAAAGCAAATATTTAA 18 V_NFE2L2_01_M02263 TRANSFAC - 40627023 40627033 9.0E-06 GTGACTCAGCC 11 V_RXRLXRB_01_M01198 TRANSFAC + 40626783 40626795 1.0E-06 AGTTCAAATGTCA 13 V_HMX3_02_M01413 TRANSFAC - 40627626 40627642 4.0E-06 ACAAGCAATCAATCCCT 17 V_HMX3_02_M01413 TRANSFAC + 40629976 40629992 9.0E-06 TGCAGCACTTAAAAGAA 17 V_GATA1_02_M00126 TRANSFAC + 40622277 40622290 7.0E-06 CAAATGATAGGGGT 14 V_ZID_01_M00085 TRANSFAC + 40629994 40630006 4.0E-06 TGGCTCTATCTTT 13 V_PAX2_02_M00486 TRANSFAC + 40630027 40630035 8.0E-06 AATAAACTA 9 V_TR4_03_M01782 TRANSFAC + 40626783 40626795 2.0E-06 AGTTCAAATGTCA 13 V_PPARG_01_M00512 TRANSFAC + 40626779 40626799 9.0E-06 TCGCAGTTCAAATGTCATCCC 21

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