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RFC3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5983 replication factor C (activator 1) 3, 38kDa chr13 + 34387205 - 34392705 34392205 Transcription Factor Binding Sites   Download all TFBS in the RFC3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU3F3_POU_DBD_monomeric_12_1 SELEX + 34391942 34391953 7.0E-06 TTGAATGAATTA 12 POU3F3_POU_DBD_monomeric_12_1 SELEX + 34391967 34391978 3.0E-06 ATGAATAAATGA 12 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 34391925 34391938 6.0E-06 TATTTAGTAAATTT 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 34391925 34391938 3.0E-06 AAATTTACTAAATA 14 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 34392089 34392100 0.0E+00 AAAATAAATAAA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX + 34391966 34391978 3.0E-06 AATGAATAAATGA 13 FOXL1_forkhead_full_dimeric_13_1 SELEX + 34392087 34392099 1.0E-06 AGAAAATAAATAA 13 POU3F4_POU_DBD_monomeric_11_1 SELEX + 34391968 34391978 9.0E-06 TGAATAAATGA 11 ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX + 34391797 34391813 5.0E-06 AAGGATAGTGAAGATCA 17 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 34392089 34392099 3.0E-06 AAAATAAATAA 11 TBX19_TBX_DBD_dimeric_20_1 SELEX + 34389581 34389600 7.0E-06 TTTAAAATCTAAATGTGAGA 20 Creb5_bZIP_DBD_dimeric_12_1 SELEX - 34392206 34392217 7.0E-06 CGTGACGTCACT 12 Pax4_MA0068.1 JASPAR - 34392541 34392570 4.0E-06 AAATACAAGCCAGCCTCCCACACCTCTTCC 30 JDP2_bZIP_full_dimeric_12_1 SELEX + 34392206 34392217 1.0E-05 AGTGACGTCACG 12 JDP2_bZIP_full_dimeric_12_1 SELEX - 34392206 34392217 9.0E-06 CGTGACGTCACT 12 Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX + 34391797 34391813 0.0E+00 AAGGATAGTGAAGATCA 17 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 34392088 34392098 2.0E-06 GAAAATAAATA 11 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 34392623 34392636 4.0E-06 AAATTGAAAAGTCA 14 ATF7_bZIP_DBD_dimeric_14_1 SELEX + 34392205 34392218 5.0E-06 TAGTGACGTCACGA 14 ATF7_bZIP_DBD_dimeric_14_1 SELEX - 34392205 34392218 6.0E-06 TCGTGACGTCACTA 14 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX + 34392523 34392536 5.0E-06 AAATAACACAGGGA 14 ONECUT2_CUT_DBD_monomeric_14_1 SELEX + 34392087 34392100 8.0E-06 AGAAAATAAATAAA 14 CREB3_bZIP_full_dimeric_14_1 SELEX + 34392205 34392218 2.0E-06 TAGTGACGTCACGA 14 CREB3_bZIP_full_dimeric_14_1 SELEX - 34392205 34392218 2.0E-06 TCGTGACGTCACTA 14 Lhx3_MA0135.1 JASPAR - 34391926 34391938 8.0E-06 AAATTTACTAAAT 13 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 34392088 34392098 2.0E-06 GAAAATAAATA 11 Foxd3_MA0041.1 JASPAR - 34389562 34389573 7.0E-06 GAATTTTTTTTT 12 Foxd3_MA0041.1 JASPAR - 34392090 34392101 8.0E-06 CTTTATTTATTT 12 POU3F1_POU_DBD_monomeric_12_2 SELEX + 34391967 34391978 2.0E-06 ATGAATAAATGA 12 MTF1_C2H2_DBD_monomeric_14_1 SELEX + 34392148 34392161 0.0E+00 TCTGCACACGGCCC 14 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 34391925 34391938 5.0E-06 AAATTTACTAAATA 14 ELF5_MA0136.1 JASPAR - 34392619 34392627 5.0E-06 AATTTCCTT 9 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 34392086 34392098 1.0E-06 GAGAAAATAAATA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 34392090 34392102 3.0E-06 AAATAAATAAAGC 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 34392089 34392099 7.0E-06 AAAATAAATAA 11 POU4F1_POU_DBD_monomeric_14_1 SELEX - 34392091 34392104 8.0E-06 CTGCTTTATTTATT 14 ONECUT3_CUT_DBD_monomeric_14_1 SELEX + 34392087 34392100 2.0E-06 AGAAAATAAATAAA 14 SOX9_HMG_full_dimeric_17_1 SELEX + 34389565 34389581 4.0E-06 AAAAAATTCCAGTGGAT 17 V_FOXP1_01_M00987 TRANSFAC - 34392080 34392099 0.0E+00 TTATTTATTTTCTCTTTGTT 20 V_HNF3B_01_M00131 TRANSFAC - 34392089 34392103 1.0E-06 TGCTTTATTTATTTT 15 V_TST1_02_M01316 TRANSFAC + 34391941 34391957 4.0E-06 GTTGAATGAATTAAGTG 17 V_DBX1_01_M01483 TRANSFAC - 34391925 34391941 4.0E-06 CAAAAATTTACTAAATA 17 V_FREAC7_01_M00293 TRANSFAC + 34392087 34392102 8.0E-06 AGAAAATAAATAAAGC 16 V_BCL6_Q3_01_M02085 TRANSFAC + 34392054 34392063 2.0E-06 ATTTCTAGAA 10 V_TBX15_01_M01263 TRANSFAC - 34392100 34392118 7.0E-06 AGTTCTGAAGTTCACTGCT 19 V_POU3F3_01_M03090 TRANSFAC + 34391962 34391978 2.0E-06 AAAGAATGAATAAATGA 17 V_AR_02_M00953 TRANSFAC + 34392705 34392731 6.0E-06 GGGATGTGCACGGCATGTTCTAAGAAC 27 V_GCM_Q2_M00634 TRANSFAC + 34392486 34392497 4.0E-06 CCCGCCCGCATT 12 V_XFD1_01_M00267 TRANSFAC + 34392089 34392102 0.0E+00 AAAATAAATAAAGC 14 V_FOXA2_04_M02749 TRANSFAC + 34392087 34392103 1.0E-06 AGAAAATAAATAAAGCA 17 V_BCL6B_03_M02740 TRANSFAC - 34392051 34392066 1.0E-05 ATATTCTAGAAATTAT 16 V_CEBP_Q3_M00770 TRANSFAC + 34391924 34391935 8.0E-06 ATATTTAGTAAA 12 V_HMGIY_Q3_M01010 TRANSFAC - 34389563 34389577 0.0E+00 ACTGGAATTTTTTTT 15 V_MTF1_Q4_M00650 TRANSFAC + 34392148 34392161 0.0E+00 TCTGCACACGGCCC 14 V_FOXD3_01_M00130 TRANSFAC - 34389561 34389572 9.0E-06 AATTTTTTTTTT 12 V_FOXD3_01_M00130 TRANSFAC - 34389562 34389573 9.0E-06 GAATTTTTTTTT 12 V_FOXD3_01_M00130 TRANSFAC - 34392090 34392101 5.0E-06 CTTTATTTATTT 12 V_BCL6_01_M01183 TRANSFAC + 34391925 34391940 0.0E+00 TATTTAGTAAATTTTT 16 V_MAFB_03_M02879 TRANSFAC + 34392684 34392698 9.0E-06 CAAGTGCAAAATTCC 15 V_OCTAMER_01_M01324 TRANSFAC + 34391962 34391978 2.0E-06 AAAGAATGAATAAATGA 17 V_IRF_Q6_01_M00972 TRANSFAC + 34392622 34392632 4.0E-06 GAAATTGAAAA 11 V_IRF2_Q6_M01882 TRANSFAC + 34392080 34392095 7.0E-06 AACAAAGAGAAAATAA 16 V_POU1F1_Q6_M00744 TRANSFAC + 34391967 34391976 0.0E+00 ATGAATAAAT 10 V_FOXO3A_Q1_M01137 TRANSFAC + 34392087 34392098 4.0E-06 AGAAAATAAATA 12 V_HNF3_Q6_01_M01012 TRANSFAC - 34392082 34392099 6.0E-06 TTATTTATTTTCTCTTTG 18 V_HNF3_Q6_01_M01012 TRANSFAC - 34392086 34392103 1.0E-06 TGCTTTATTTATTTTCTC 18 V_FOXJ1_03_M02750 TRANSFAC + 34392089 34392104 8.0E-06 AAAATAAATAAAGCAG 16 V_HFH4_01_M00742 TRANSFAC - 34392089 34392101 6.0E-06 CTTTATTTATTTT 13 V_AFP1_Q6_M00616 TRANSFAC + 34392521 34392531 7.0E-06 AAAAATAACAC 11 V_TCFAP2E_04_M02926 TRANSFAC + 34389556 34389569 6.0E-06 CATACAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 34389557 34389570 8.0E-06 ATACAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 34389558 34389571 0.0E+00 TACAAAAAAAAAAT 14 V_CDX_Q5_M00991 TRANSFAC + 34392091 34392108 1.0E-06 AATAAATAAAGCAGTGAA 18 V_NKX62_Q2_M00489 TRANSFAC + 34392089 34392100 7.0E-06 AAAATAAATAAA 12 V_MEF2A_Q6_M02024 TRANSFAC + 34392566 34392575 1.0E-06 TATTTTTAAA 10 V_AR_03_M00956 TRANSFAC + 34392705 34392731 9.0E-06 GGGATGTGCACGGCATGTTCTAAGAAC 27 V_ELF4_04_M02850 TRANSFAC + 34389556 34389572 1.0E-06 CATACAAAAAAAAAATT 17 V_ELF4_04_M02850 TRANSFAC + 34389557 34389573 0.0E+00 ATACAAAAAAAAAATTC 17 V_ELF4_04_M02850 TRANSFAC - 34391931 34391947 3.0E-06 ATTCAACAAAAATTTAC 17 V_FOXA2_02_M02853 TRANSFAC + 34392521 34392535 0.0E+00 AAAAATAACACAGGG 15 V_POU3F2_01_M00463 TRANSFAC - 34391967 34391980 2.0E-06 TTTCATTTATTCAT 14 V_ZFP105_03_M02827 TRANSFAC + 34389558 34389572 0.0E+00 TACAAAAAAAAAATT 15 V_ZFP105_03_M02827 TRANSFAC - 34391933 34391947 9.0E-06 ATTCAACAAAAATTT 15 V_ZFP105_03_M02827 TRANSFAC + 34392570 34392584 4.0E-06 TTTAAACAAGAAAAG 15 V_ZFP410_03_M02832 TRANSFAC + 34392795 34392811 9.0E-06 TGTGTTGGGATGGAGTT 17 V_E2F1_Q6_01_M00940 TRANSFAC + 34392455 34392464 4.0E-06 GTTTCGCGCC 10 V_XFD3_01_M00269 TRANSFAC - 34391936 34391949 1.0E-05 TCATTCAACAAAAA 14 V_AMEF2_Q6_M00403 TRANSFAC + 34392515 34392532 9.0E-06 ATGGAGAAAAATAACACA 18 V_HNF3_Q6_M00791 TRANSFAC + 34392088 34392100 8.0E-06 GAAAATAAATAAA 13 V_IRC900814_04_M02870 TRANSFAC + 34392626 34392641 8.0E-06 TTGAAAAGTCATAAAT 16 V_IRF_Q6_M00772 TRANSFAC - 34391971 34391985 9.0E-06 GTTCCTTTCATTTAT 15 V_IRF_Q6_M00772 TRANSFAC + 34392031 34392045 3.0E-06 CACATTTTCAATTCC 15 V_IRF_Q6_M00772 TRANSFAC - 34392082 34392096 9.0E-06 TTTATTTTCTCTTTG 15 V_SOX_Q6_M01014 TRANSFAC - 34392076 34392088 3.0E-06 CTCTTTGTTCGCA 13 V_HNF1_Q6_01_M01011 TRANSFAC + 34391919 34391939 2.0E-06 AGCAGATATTTAGTAAATTTT 21 V_CREBATF_Q6_M00981 TRANSFAC - 34392208 34392216 9.0E-06 GTGACGTCA 9 V_HBP1_03_M02762 TRANSFAC + 34391939 34391954 0.0E+00 TTGTTGAATGAATTAA 16 V_HBP1_03_M02762 TRANSFAC + 34391952 34391967 3.0E-06 TAAGTGAATGAAAGAA 16 V_HBP1_03_M02762 TRANSFAC + 34391956 34391971 8.0E-06 TGAATGAAAGAATGAA 16 V_HBP1_03_M02762 TRANSFAC + 34391960 34391975 5.0E-06 TGAAAGAATGAATAAA 16 V_HBP1_03_M02762 TRANSFAC + 34391964 34391979 5.0E-06 AGAATGAATAAATGAA 16 V_PIT1_01_M01465 TRANSFAC + 34391941 34391957 8.0E-06 GTTGAATGAATTAAGTG 17 V_PAX8_01_M00717 TRANSFAC + 34391937 34391951 6.0E-06 TTTTGTTGAATGAAT 15 V_MEF2_Q6_01_M00941 TRANSFAC - 34392092 34392103 6.0E-06 TGCTTTATTTAT 12 V_NCX_02_M01420 TRANSFAC - 34391925 34391941 9.0E-06 CAAAAATTTACTAAATA 17 V_POU6F1_01_M00465 TRANSFAC - 34392092 34392102 4.0E-06 GCTTTATTTAT 11 V_CREB_Q2_01_M00916 TRANSFAC - 34392204 34392217 7.0E-06 CGTGACGTCACTAC 14 V_PAX8_B_M00328 TRANSFAC + 34391936 34391953 3.0E-06 TTTTTGTTGAATGAATTA 18 V_IRF7_01_M00453 TRANSFAC + 34392619 34392636 9.0E-06 AAGGAAATTGAAAAGTCA 18 V_HFH8_01_M00294 TRANSFAC - 34392089 34392101 6.0E-06 CTTTATTTATTTT 13 V_ZFP105_04_M02931 TRANSFAC - 34392178 34392194 6.0E-06 CCGCGTAAATGATTTTG 17 V_CREM_Q6_M01820 TRANSFAC - 34392205 34392215 1.0E-06 TGACGTCACTA 11 V_MTF1_06_M02882 TRANSFAC + 34389557 34389570 4.0E-06 ATACAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 34392087 34392100 8.0E-06 AGAAAATAAATAAA 14 V_CREBP1_Q2_M00179 TRANSFAC + 34392206 34392217 4.0E-06 AGTGACGTCACG 12 V_CREBP1_Q2_M00179 TRANSFAC - 34392206 34392217 1.0E-06 CGTGACGTCACT 12 V_FAC1_01_M00456 TRANSFAC + 34389557 34389570 4.0E-06 ATACAAAAAAAAAA 14 V_BRN4_01_M01473 TRANSFAC + 34391941 34391957 5.0E-06 GTTGAATGAATTAAGTG 17 V_FOXL1_02_M02857 TRANSFAC + 34392567 34392582 2.0E-06 ATTTTTAAACAAGAAA 16 V_FOXL1_04_M02753 TRANSFAC + 34392087 34392103 1.0E-06 AGAAAATAAATAAAGCA 17 V_ATF1_03_M02738 TRANSFAC + 34392204 34392219 5.0E-06 GTAGTGACGTCACGAG 16 V_FOX_Q2_M00809 TRANSFAC - 34392089 34392101 0.0E+00 CTTTATTTATTTT 13 V_PLZF_02_M01075 TRANSFAC + 34389571 34389599 9.0E-06 TTCCAGTGGATTTAAAATCTAAATGTGAG 29 V_PLZF_02_M01075 TRANSFAC + 34391920 34391948 4.0E-06 GCAGATATTTAGTAAATTTTTGTTGAATG 29 V_BBX_03_M02739 TRANSFAC + 34391939 34391953 4.0E-06 TTGTTGAATGAATTA 15 V_BBX_03_M02739 TRANSFAC - 34391939 34391953 1.0E-06 TAATTCATTCAACAA 15 V_IRF1_Q6_01_M01881 TRANSFAC - 34392081 34392094 4.0E-06 TATTTTCTCTTTGT 14 V_IRF1_Q6_01_M01881 TRANSFAC - 34392621 34392634 9.0E-06 ACTTTTCAATTTCC 14 V_SRF_06_M02916 TRANSFAC + 34389555 34389571 2.0E-06 GCATACAAAAAAAAAAT 17 V_SRF_06_M02916 TRANSFAC + 34389556 34389572 1.0E-06 CATACAAAAAAAAAATT 17 V_SRF_06_M02916 TRANSFAC + 34389557 34389573 0.0E+00 ATACAAAAAAAAAATTC 17 V_SRF_06_M02916 TRANSFAC - 34392560 34392576 6.0E-06 GTTTAAAAATACAAGCC 17 V_FOXJ2_01_M00422 TRANSFAC + 34392086 34392103 3.0E-06 GAGAAAATAAATAAAGCA 18 V_SOX18_04_M02905 TRANSFAC - 34391943 34391958 4.0E-06 TCACTTAATTCATTCA 16 V_SOX4_01_M01308 TRANSFAC + 34391793 34391800 1.0E-05 AACAAAGG 8 V_SOX1_03_M02802 TRANSFAC - 34391941 34391956 8.0E-06 ACTTAATTCATTCAAC 16 V_SOX1_03_M02802 TRANSFAC - 34391962 34391977 9.0E-06 CATTTATTCATTCTTT 16 V_PR_02_M00957 TRANSFAC + 34392705 34392731 5.0E-06 GGGATGTGCACGGCATGTTCTAAGAAC 27 V_HNF3B_Q6_M02014 TRANSFAC - 34392091 34392099 1.0E-05 TTATTTATT 9 V_PIT1_Q6_M00802 TRANSFAC - 34391770 34391787 7.0E-06 TATTCCTCAATATTCTTA 18 V_PIT1_Q6_M00802 TRANSFAC - 34392566 34392583 1.0E-06 TTTTCTTGTTTAAAAATA 18 V_SOX15_04_M02903 TRANSFAC + 34392616 34392630 8.0E-06 TTGAAGGAAATTGAA 15 V_ELF5_04_M02241 TRANSFAC - 34392619 34392627 5.0E-06 AATTTCCTT 9 V_HOXD10_01_M01375 TRANSFAC - 34391932 34391948 1.0E-05 CATTCAACAAAAATTTA 17 V_TCF11MAFG_01_M00284 TRANSFAC - 34392621 34392642 9.0E-06 TATTTATGACTTTTCAATTTCC 22 V_TCF3_05_M02920 TRANSFAC + 34389557 34389571 0.0E+00 ATACAAAAAAAAAAT 15 V_TCF3_05_M02920 TRANSFAC + 34389558 34389572 6.0E-06 TACAAAAAAAAAATT 15 V_TCF3_05_M02920 TRANSFAC + 34392084 34392098 2.0E-06 AAGAGAAAATAAATA 15 V_MTF1_05_M02778 TRANSFAC - 34392146 34392161 1.0E-06 GGGCCGTGTGCAGACA 16 V_GLIS2_04_M02863 TRANSFAC + 34392564 34392577 5.0E-06 TGTATTTTTAAACA 14 V_FOXK1_03_M02752 TRANSFAC + 34392087 34392103 3.0E-06 AGAAAATAAATAAAGCA 17 V_PAX4_04_M00380 TRANSFAC + 34392088 34392117 4.0E-06 GAAAATAAATAAAGCAGTGAACTTCAGAAC 30 V_NANOG_02_M01247 TRANSFAC + 34392570 34392589 2.0E-06 TTTAAACAAGAAAAGCTCCA 20 V_HSF1_Q6_01_M02017 TRANSFAC + 34392051 34392064 3.0E-06 ATAATTTCTAGAAT 14 V_HSF1_Q6_01_M02017 TRANSFAC - 34392055 34392068 2.0E-06 TTATATTCTAGAAA 14

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