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RET Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5979 ret proto-oncogene chr10 + 43567516 - 43573016 43572516 Transcription Factor Binding Sites   Download all TFBS in the RET promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SPIC_ETS_full_monomeric_14_1 SELEX + 43575474 43575487 6.0E-06 CAAATGGGGAAGTG 14 TBR1_TBX_DBD_monomeric_10_1 SELEX + 43574112 43574121 3.0E-06 AGGTGTGAAC 10 HINFP1_C2H2_full_monomeric_12_1 SELEX - 43574545 43574556 5.0E-06 CAGCGTCCGCAA 12 EWSR1-FLI1_MA0149.1 JASPAR - 43575364 43575381 5.0E-06 AGGAGGAAGCAAGCCAGG 18 EBF1_MA0154.1 JASPAR + 43571107 43571116 1.0E-06 ACCCAAGGGA 10 PAX2_PAX_DBD_monomeric_18_1 SELEX + 43571252 43571269 9.0E-06 CATCACGGTTGGCTGAGT 18 SPIB_ETS_DBD_monomeric_14_1 SELEX + 43575474 43575487 1.0E-06 CAAATGGGGAAGTG 14 Klf4_MA0039.2 JASPAR + 43571152 43571161 3.0E-06 AGGGTGTGGC 10 EOMES_TBX_DBD_monomeric_13_1 SELEX + 43574111 43574123 9.0E-06 CAGGTGTGAACTG 13 RFX2_RFX_DBD_dimeric_15_1 SELEX + 43572765 43572779 3.0E-06 CGCTGCTAGGCAAAG 15 T_MA0009.1 JASPAR + 43574110 43574120 4.0E-06 CCAGGTGTGAA 11 Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX + 43567622 43567638 9.0E-06 TGTGTAATTCAAGGTCA 17 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX + 43573905 43573914 5.0E-06 AGCATATGCT 10 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX - 43573905 43573914 5.0E-06 AGCATATGCT 10 TBR1_TBX_full_monomeric_11_1 SELEX + 43574111 43574121 5.0E-06 CAGGTGTGAAC 11 Gfi_MA0038.1 JASPAR + 43575548 43575557 7.0E-06 GAAATCACTG 10 RFX3_RFX_DBD_dimeric_15_1 SELEX + 43572765 43572779 5.0E-06 CGCTGCTAGGCAAAG 15 OLIG1_bHLH_DBD_dimeric_10_1 SELEX + 43573905 43573914 9.0E-06 AGCATATGCT 10 OLIG1_bHLH_DBD_dimeric_10_1 SELEX - 43573905 43573914 9.0E-06 AGCATATGCT 10 SP4_C2H2_full_monomeric_17_1 SELEX + 43572396 43572412 8.0E-06 GGAGCCCCGCCCCTTCC 17 NFATC1_NFAT_full_dimeric_20_1 SELEX + 43575544 43575563 6.0E-06 TGAGGAAATCACTGTTTCCT 20 NFATC1_NFAT_full_dimeric_20_1 SELEX - 43575546 43575565 3.0E-06 CAAGGAAACAGTGATTTCCT 20 CTCF_C2H2_full_monomeric_17_1 SELEX + 43574536 43574552 0.0E+00 AGCGCCCTCTTGCGGAC 17 TBX20_TBX_full_dimeric_16_1 SELEX - 43574625 43574640 8.0E-06 GAGTGTGCATGTGTGA 16 TBX21_TBX_full_monomeric_10_1 SELEX + 43574111 43574120 6.0E-06 CAGGTGTGAA 10 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 43571148 43571162 8.0E-06 TGCCACACCCTTCCA 15 Pou5f1_MA0142.1 JASPAR + 43575512 43575526 7.0E-06 CTTTCTTCTGCAGAA 15 Myf_MA0055.1 JASPAR - 43572743 43572754 3.0E-06 CAGCAACAGCAG 12 Myf_MA0055.1 JASPAR - 43572755 43572766 8.0E-06 CGGCAGCAGCAG 12 TBX20_TBX_DBD_monomeric_15_1 SELEX + 43574108 43574122 4.0E-06 GGCCAGGTGTGAACT 15 SPI1_ETS_full_monomeric_14_1 SELEX + 43575474 43575487 1.0E-06 CAAATGGGGAAGTG 14 PLAG1_MA0163.1 JASPAR - 43574481 43574494 3.0E-06 GGGGCTCACTGGGG 14 Sox2_MA0143.1 JASPAR + 43575511 43575525 1.0E-06 CCTTTCTTCTGCAGA 15 V_AP2ALPHA_Q6_M01857 TRANSFAC + 43571947 43571957 3.0E-06 TGCCTCCGGCC 11 V_AP2ALPHA_Q6_M01857 TRANSFAC + 43572424 43572434 3.0E-06 CGCCTCCGGCC 11 V_SPI1_01_M01203 TRANSFAC + 43575474 43575490 1.0E-06 CAAATGGGGAAGTGCAT 17 V_TCF3_01_M01594 TRANSFAC + 43575511 43575523 8.0E-06 CCTTTCTTCTGCA 13 V_APOLYA_B_M00310 TRANSFAC + 43575502 43575516 7.0E-06 ACTAAATTGCCTTTC 15 V_NRSF_Q4_M01028 TRANSFAC + 43572743 43572761 1.0E-06 CTGCTGTTGCTGCTGCTGC 19 V_POU5F1_02_M02245 TRANSFAC + 43575512 43575526 7.0E-06 CTTTCTTCTGCAGAA 15 V_SP1_Q6_01_M00931 TRANSFAC - 43572399 43572408 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 43572463 43572472 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 43572468 43572477 4.0E-06 GGGGCGGGGC 10 V_TBR2_01_M01774 TRANSFAC + 43574112 43574120 3.0E-06 AGGTGTGAA 9 V_GKLF_02_M01588 TRANSFAC - 43571150 43571161 0.0E+00 GCCACACCCTTC 12 V_SP1_02_M01303 TRANSFAC - 43572457 43572467 8.0E-06 GGGGCGGGGGC 11 V_PU1_Q4_M01172 TRANSFAC - 43575475 43575493 1.0E-06 TCAATGCACTTCCCCATTT 19 V_WT1_Q6_01_M02036 TRANSFAC + 43572456 43572465 4.0E-06 CGCCCCCGCC 10 V_GC_01_M00255 TRANSFAC - 43572397 43572410 3.0E-06 AAGGGGCGGGGCTC 14 V_GC_01_M00255 TRANSFAC - 43572466 43572479 2.0E-06 TAGGGGCGGGGCGG 14 V_MYF_01_M01302 TRANSFAC - 43572743 43572754 3.0E-06 CAGCAACAGCAG 12 V_MYF_01_M01302 TRANSFAC - 43572755 43572766 8.0E-06 CGGCAGCAGCAG 12 V_KROX_Q6_M00982 TRANSFAC + 43572454 43572467 2.0E-06 ACCGCCCCCGCCCC 14 V_SP1_Q6_M00196 TRANSFAC + 43571386 43571398 8.0E-06 AGAGGGCGGGGTT 13 V_SP1_Q6_M00196 TRANSFAC - 43572398 43572410 1.0E-06 AAGGGGCGGGGCT 13 V_SP1_Q6_M00196 TRANSFAC - 43572462 43572474 7.0E-06 GCGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC - 43572467 43572479 4.0E-06 TAGGGGCGGGGCG 13 V_EGR1_Q6_M01873 TRANSFAC - 43572455 43572464 4.0E-06 GCGGGGGCGG 10 V_SPIB_01_M01204 TRANSFAC + 43575474 43575490 5.0E-06 CAAATGGGGAAGTGCAT 17 V_RREB1_01_M00257 TRANSFAC + 43574503 43574516 2.0E-06 CCCCAACCACCCCA 14 V_OCAB_Q6_M02113 TRANSFAC - 43571345 43571355 7.0E-06 ATCTGCACATC 11 V_KLF7_03_M02773 TRANSFAC - 43571385 43571400 2.0E-06 AGAACCCCGCCCTCTT 16 V_EBF1_01_M02267 TRANSFAC + 43571107 43571116 1.0E-06 ACCCAAGGGA 10 V_STAF_02_M00264 TRANSFAC + 43574421 43574441 9.0E-06 CTTTCCCAGGAGCCACAGCTC 21 V_CTCF_01_M01200 TRANSFAC - 43574535 43574554 1.0E-05 GCGTCCGCAAGAGGGCGCTT 20 V_SP4_Q5_M01273 TRANSFAC + 43572399 43572409 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC + 43572458 43572468 7.0E-06 CCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC + 43572463 43572473 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC + 43572468 43572478 8.0E-06 GCCCCGCCCCT 11 V_ZFP105_04_M02931 TRANSFAC + 43575495 43575511 7.0E-06 CTGATTCACTAAATTGC 17 V_CNOT3_01_M01253 TRANSFAC + 43573077 43573086 8.0E-06 GGCCGCGCCC 10 V_PLAG1_01_M01778 TRANSFAC - 43571873 43571888 2.0E-06 GGGGTAGTAGAGAGGG 16 V_VDR_Q6_M00961 TRANSFAC + 43571099 43571110 8.0E-06 CTGTCTGAACCC 12 V_TCF4_Q5_M00671 TRANSFAC + 43574399 43574406 1.0E-05 CCTTTGAA 8 V_STAT6_02_M00500 TRANSFAC - 43575546 43575553 1.0E-05 GATTTCCT 8 V_TBX5_Q5_M01044 TRANSFAC - 43574111 43574120 5.0E-06 TTCACACCTG 10 V_SOX2_01_M02246 TRANSFAC + 43575511 43575525 1.0E-06 CCTTTCTTCTGCAGA 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 43575364 43575381 5.0E-06 AGGAGGAAGCAAGCCAGG 18 V_YY1_01_M00059 TRANSFAC - 43573575 43573591 5.0E-06 GATGACCATCTTTGCAA 17 V_SP1_Q2_01_M00933 TRANSFAC + 43572400 43572409 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC + 43572469 43572478 7.0E-06 CCCCGCCCCT 10 V_UF1H3BETA_Q6_M01068 TRANSFAC + 43572608 43572621 4.0E-06 GGCGGGGATGGGGC 14 V_SP1_Q4_01_M00932 TRANSFAC + 43571386 43571398 5.0E-06 AGAGGGCGGGGTT 13 V_SP1_Q4_01_M00932 TRANSFAC - 43572398 43572410 0.0E+00 AAGGGGCGGGGCT 13 V_SP1_Q4_01_M00932 TRANSFAC - 43572467 43572479 6.0E-06 TAGGGGCGGGGCG 13 V_GFI1_Q6_01_M02010 TRANSFAC - 43575548 43575557 5.0E-06 CAGTGATTTC 10 V_SMAD1_01_M01590 TRANSFAC - 43575510 43575521 7.0E-06 CAGAAGAAAGGC 12 V_NANOG_02_M01247 TRANSFAC - 43575506 43575525 1.0E-06 TCTGCAGAAGAAAGGCAATT 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.