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RCN2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5955 reticulocalbin 2, EF-hand calcium binding domain chr15 + 77218961 - 77224461 77223961 Transcription Factor Binding Sites   Download all TFBS in the RCN2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints PAX6_PAX_DBD_monomeric_19_1 SELEX + 77228115 77228133 0.0E+00 CTTCCTGCATGAATGAGCA 19 HOXC13_homeodomain_DBD_monomeric_11_1 SELEX + 77223600 77223610 2.0E-06 TCTCATAAAAT 11 RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 77223376 77223391 4.0E-06 TAAGGTGAAGTGTTCA 16 Pax6_MA0069.1 JASPAR + 77228116 77228129 1.0E-05 TTCCTGCATGAATG 14 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX + 77228144 77228156 9.0E-06 CTGAGGTCATAAG 13 HOXD13_homeodomain_DBD_monomeric_11_1 SELEX + 77223600 77223610 2.0E-06 TCTCATAAAAT 11 TBX19_TBX_DBD_dimeric_20_1 SELEX + 77223520 77223539 8.0E-06 GTTCACATTAACTTGTAAAT 20 TBX19_TBX_DBD_dimeric_20_1 SELEX - 77223520 77223539 5.0E-06 ATTTACAAGTTAATGTGAAC 20 CUX1_CUT_DBD_dimeric_17_1 SELEX - 77223668 77223684 5.0E-06 AACAATACAATATCGAA 17 IRF7_IRF_DBD_trimeric_17_1 SELEX + 77224765 77224781 0.0E+00 ATAAAGAAAATCGACTT 17 IRF1_MA0050.1 JASPAR - 77223334 77223345 7.0E-06 AAAAACGAAAGA 12 Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX + 77223601 77223610 9.0E-06 CTCATAAAAT 10 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 77223601 77223610 6.0E-06 CTCATAAAAT 10 FIGLA_bHLH_DBD_dimeric_10_1 SELEX + 77228181 77228190 7.0E-06 ATCACCTGTT 10 NFATC1_NFAT_full_dimeric_20_1 SELEX - 77228176 77228195 6.0E-06 AGTGGAACAGGTGATTTCCT 20 BCL6B_C2H2_DBD_monomeric_17_1 SELEX + 77228168 77228184 2.0E-06 TGTTCTCTAGGAAATCA 17 CUX2_CUT_DBD_dimeric_18_1 SELEX + 77223656 77223673 7.0E-06 GGCAATAATTTTTTCGAT 18 HOXB13_homeodomain_DBD_monomeric_11_1 SELEX + 77223600 77223610 3.0E-06 TCTCATAAAAT 11 Pou5f1_MA0142.1 JASPAR + 77223525 77223539 6.0E-06 CATTAACTTGTAAAT 15 Myf_MA0055.1 JASPAR - 77224216 77224227 4.0E-06 CAGCAGCAGCAG 12 HOXA13_homeodomain_full_monomeric_11_1 SELEX + 77223600 77223610 2.0E-06 TCTCATAAAAT 11 HOXC10_homeodomain_DBD_monomeric_10_3 SELEX + 77223601 77223610 6.0E-06 CTCATAAAAT 10 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 77228138 77228152 3.0E-06 GAGGGCCTGAGGTCA 15 IRF2_MA0051.1 JASPAR - 77223329 77223346 8.0E-06 GAAAAACGAAAGATGATT 18 V_DMRT4_01_M01149 TRANSFAC - 77223607 77223619 2.0E-06 AATGTATCTATTT 13 V_HOXA9_01_M01351 TRANSFAC + 77223598 77223614 3.0E-06 ACTCTCATAAAATAGAT 17 V_DBX1_01_M01483 TRANSFAC - 77228242 77228258 4.0E-06 TAGGTAATTTAGAATAA 17 V_ZSCAN4_03_M02838 TRANSFAC - 77228068 77228084 8.0E-06 AGCTTGTGCACATGAAC 17 V_BCL6B_03_M02740 TRANSFAC + 77228169 77228184 1.0E-05 GTTCTCTAGGAAATCA 16 V_DMRT3_01_M01148 TRANSFAC + 77223607 77223621 1.0E-06 AAATAGATACATTGA 15 V_ZFX_01_M01593 TRANSFAC - 77223923 77223938 1.0E-06 CACCAGGCCGCGCCGC 16 V_ACAAT_B_M00309 TRANSFAC + 77223993 77224001 8.0E-06 CATTGGTGG 9 V_POU5F1_02_M02245 TRANSFAC + 77223525 77223539 6.0E-06 CATTAACTTGTAAAT 15 V_MEF2_02_M00231 TRANSFAC + 77223596 77223617 1.0E-05 CTACTCTCATAAAATAGATACA 22 V_IRF2_Q6_M01882 TRANSFAC - 77223332 77223347 1.0E-05 AGAAAAACGAAAGATG 16 V_OCT1_01_M00135 TRANSFAC + 77224712 77224730 6.0E-06 ATGAATATGTTAAACTCGG 19 V_IRF3_05_M02767 TRANSFAC - 77228212 77228225 0.0E+00 CAGAAAGGAAACCA 14 V_AREB6_04_M00415 TRANSFAC + 77228083 77228091 8.0E-06 CTGTTTCTT 9 V_TCFAP2E_04_M02926 TRANSFAC - 77223662 77223675 5.0E-06 ATATCGAAAAAATT 14 V_HOXA13_03_M01430 TRANSFAC + 77223597 77223612 1.0E-06 TACTCTCATAAAATAG 16 V_HOXC13_01_M01317 TRANSFAC + 77223597 77223612 1.0E-06 TACTCTCATAAAATAG 16 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 77228145 77228159 7.0E-06 TGAGGTCATAAGCTG 15 V_PAX5_02_M00144 TRANSFAC - 77228182 77228209 5.0E-06 AAAATGACTGCTGAAGTGGAACAGGTGA 28 V_ELF4_04_M02850 TRANSFAC + 77223600 77223616 7.0E-06 TCTCATAAAATAGATAC 17 V_TST1_01_M00133 TRANSFAC - 77228242 77228256 6.0E-06 GGTAATTTAGAATAA 15 V_ZNF219_01_M01122 TRANSFAC - 77223762 77223773 8.0E-06 CGCCCCCACCCC 12 V_TCF3_04_M02816 TRANSFAC - 77228085 77228101 4.0E-06 ACATGATCAAAAGAAAC 17 V_MYF_01_M01302 TRANSFAC - 77224216 77224227 4.0E-06 CAGCAGCAGCAG 12 V_KROX_Q6_M00982 TRANSFAC - 77223762 77223775 5.0E-06 CACGCCCCCACCCC 14 V_OLF1_01_M00261 TRANSFAC + 77228046 77228067 1.0E-05 GAGGAGTCCTTTAGGAAGGTGA 22 V_IRX4_01_M01410 TRANSFAC - 77223524 77223540 8.0E-06 GATTTACAAGTTAATGT 17 V_IRX4_01_M01410 TRANSFAC + 77223525 77223541 9.0E-06 CATTAACTTGTAAATCA 17 V_IRX4_01_M01410 TRANSFAC + 77224711 77224727 8.0E-06 GATGAATATGTTAAACT 17 V_CDX2_01_M01449 TRANSFAC + 77223653 77223668 5.0E-06 TCAGGCAATAATTTTT 16 V_ZF5_B_M00333 TRANSFAC + 77223766 77223778 1.0E-06 TGGGGGCGTGCTT 13 V_AP2BETA_Q3_M01858 TRANSFAC - 77224166 77224181 9.0E-06 GCGCCGGCCCGCGGAG 16 V_HOXC11_01_M01329 TRANSFAC + 77223597 77223612 9.0E-06 TACTCTCATAAAATAG 16 V_SOX18_03_M02801 TRANSFAC + 77223675 77223690 1.0E-06 TTGTATTGTTGTCTCA 16 V_ISRE_01_M00258 TRANSFAC + 77228212 77228226 7.0E-06 TGGTTTCCTTTCTGG 15 V_TCF7_03_M02817 TRANSFAC - 77228085 77228101 2.0E-06 ACATGATCAAAAGAAAC 17 V_HOXA11_01_M01378 TRANSFAC + 77223597 77223612 9.0E-06 TACTCTCATAAAATAG 16 V_PPARA_02_M00518 TRANSFAC + 77223808 77223826 8.0E-06 GCGGGTCGTAGAGGTCTAC 19 V_POU6F1_01_M00465 TRANSFAC - 77223660 77223670 3.0E-06 GAAAAAATTAT 11 V_SOX17_04_M02904 TRANSFAC - 77228118 77228134 4.0E-06 GTGCTCATTCATGCAGG 17 V_IRF7_01_M00453 TRANSFAC - 77223331 77223348 1.0E-06 TAGAAAAACGAAAGATGA 18 V_NEUROD_02_M01288 TRANSFAC + 77224219 77224230 1.0E-06 CTGCTGCTGTGC 12 V_CIZ_01_M00734 TRANSFAC - 77223662 77223670 5.0E-06 GAAAAAATT 9 V_AP3_Q6_M00690 TRANSFAC + 77228246 77228253 5.0E-06 TCTAAATT 8 V_SMAD4_04_M02898 TRANSFAC + 77223935 77223951 5.0E-06 GGTGCCCCGCCACTCCG 17 V_CNOT3_01_M01253 TRANSFAC - 77223924 77223933 4.0E-06 GGCCGCGCCG 10 V_AREB6_02_M00413 TRANSFAC + 77228180 77228191 1.0E-06 AATCACCTGTTC 12 V_GFI1B_01_M01058 TRANSFAC + 77223535 77223546 9.0E-06 TAAATCACGAAA 12 V_TCF7_04_M02921 TRANSFAC + 77228240 77228254 1.0E-05 TCTTATTCTAAATTA 15 V_STAT6_02_M00500 TRANSFAC - 77228176 77228183 1.0E-05 GATTTCCT 8 V_MEF3_B_M00319 TRANSFAC - 77224490 77224502 4.0E-06 TCCTCAGGCTTTC 13 V_TCFAP2B_04_M02924 TRANSFAC - 77223647 77223661 9.0E-06 ATTGCCTGAGGAATC 15 V_DMRT2_01_M01147 TRANSFAC + 77223606 77223621 0.0E+00 AAAATAGATACATTGA 16 V_IRF1_01_M00062 TRANSFAC - 77223334 77223346 2.0E-06 GAAAAACGAAAGA 13 V_PIT1_Q6_M00802 TRANSFAC + 77228243 77228260 7.0E-06 TATTCTAAATTACCTACA 18 V_ARP1_01_M00155 TRANSFAC - 77228145 77228160 7.0E-06 CCAGCTTATGACCTCA 16 V_HOXD10_01_M01375 TRANSFAC + 77223598 77223614 3.0E-06 ACTCTCATAAAATAGAT 17 V_STAT1_05_M01260 TRANSFAC + 77228169 77228190 5.0E-06 GTTCTCTAGGAAATCACCTGTT 22 V_AR_Q6_M00962 TRANSFAC + 77228128 77228136 6.0E-06 TGAGCACAT 9 V_PAX6_01_M00097 TRANSFAC + 77228112 77228132 2.0E-06 TACCTTCCTGCATGAATGAGC 21 V_OCT4_01_M01125 TRANSFAC + 77223525 77223539 3.0E-06 CATTAACTTGTAAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.