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RBP3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5949 retinol binding protein 3, interstitial chr10 - 48390491 - 48395991 48390991 Transcription Factor Binding Sites   Download all TFBS in the RBP3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 48392437 48392450 4.0E-06 AAAAATATGTTTGT 14 VSX1_homeodomain_full_monomeric_11_1 SELEX - 48392423 48392433 4.0E-06 AGCTAATTGAC 11 NEUROD2_bHLH_full_dimeric_10_1 SELEX + 48392481 48392490 4.0E-06 GACATATGGT 10 NEUROD2_bHLH_full_dimeric_10_1 SELEX - 48392481 48392490 5.0E-06 ACCATATGTC 10 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 48392446 48392459 9.0E-06 TAATGAGCTAAAAA 14 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 48392434 48392445 7.0E-06 AAAACAAACATA 12 FOXL1_forkhead_full_dimeric_13_1 SELEX + 48392432 48392444 9.0E-06 CTAAAACAAACAT 13 FOXD1_MA0031.1 JASPAR - 48392390 48392397 7.0E-06 GTAAACAT 8 Sox1_HMG_DBD_dimeric_13_1 SELEX - 48392513 48392525 2.0E-06 TCACTTCCATTGG 13 POU6F2_POU_DBD_dimeric_16_1 SELEX + 48392445 48392460 4.0E-06 ATTTTTAGCTCATTAG 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 48392445 48392460 1.0E-06 CTAATGAGCTAAAAAT 16 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX - 48392481 48392490 4.0E-06 ACCATATGTC 10 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 48392433 48392443 9.0E-06 TAAAACAAACA 11 MEF2A_MA0052.1 JASPAR + 48392443 48392452 8.0E-06 ATATTTTTAG 10 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 48392421 48392434 8.0E-06 AGGTCAATTAGCTA 14 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX + 48392480 48392491 9.0E-06 TGACATATGGTC 12 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX - 48392480 48392491 8.0E-06 GACCATATGTCA 12 FOXI1_MA0042.1 JASPAR - 48392435 48392446 1.0E-06 ATATGTTTGTTT 12 SOX14_HMG_DBD_dimeric_13_1 SELEX - 48392513 48392525 5.0E-06 TCACTTCCATTGG 13 OLIG1_bHLH_DBD_dimeric_10_1 SELEX + 48392481 48392490 7.0E-06 GACATATGGT 10 OLIG1_bHLH_DBD_dimeric_10_1 SELEX - 48392481 48392490 6.0E-06 ACCATATGTC 10 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 48392433 48392443 4.0E-06 TAAAACAAACA 11 SOX14_HMG_DBD_dimeric_12_1 SELEX - 48392514 48392525 2.0E-06 TCACTTCCATTG 12 Foxd3_MA0041.1 JASPAR - 48392435 48392446 0.0E+00 ATATGTTTGTTT 12 Atoh1_bHLH_DBD_dimeric_10_1 SELEX + 48392481 48392490 5.0E-06 GACATATGGT 10 Atoh1_bHLH_DBD_dimeric_10_1 SELEX - 48392481 48392490 5.0E-06 ACCATATGTC 10 NEUROG2_bHLH_full_dimeric_10_1 SELEX - 48392481 48392490 4.0E-06 ACCATATGTC 10 FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 48392437 48392450 8.0E-06 ACAAACATATTTTT 14 FOXO6_forkhead_DBD_dimeric_14_1 SELEX - 48392437 48392450 7.0E-06 AAAAATATGTTTGT 14 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX - 48392481 48392490 4.0E-06 ACCATATGTC 10 OLIG2_bHLH_full_dimeric_10_1 SELEX - 48392481 48392490 4.0E-06 ACCATATGTC 10 OLIG3_bHLH_DBD_dimeric_10_1 SELEX + 48392440 48392449 6.0E-06 AACATATTTT 10 OLIG3_bHLH_DBD_dimeric_10_1 SELEX - 48392440 48392449 8.0E-06 AAAATATGTT 10 OLIG3_bHLH_DBD_dimeric_10_1 SELEX - 48392481 48392490 4.0E-06 ACCATATGTC 10 HNF1A_MA0046.1 JASPAR - 48392372 48392385 5.0E-06 AGATAATGATTTCC 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 48392437 48392450 7.0E-06 ACAAACATATTTTT 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 48392437 48392450 2.0E-06 AAAAATATGTTTGT 14 V_FOXD3_01_M00130 TRANSFAC - 48392435 48392446 1.0E-06 ATATGTTTGTTT 12 V_MEF2_02_M00231 TRANSFAC - 48392438 48392459 3.0E-06 TAATGAGCTAAAAATATGTTTG 22 V_HOXD1_01_M01448 TRANSFAC - 48392448 48392464 6.0E-06 AATCCTAATGAGCTAAA 17 V_HNF3_Q6_01_M01012 TRANSFAC - 48392431 48392448 5.0E-06 AAATATGTTTGTTTTAGC 18 V_FOXJ1_03_M02750 TRANSFAC + 48392434 48392449 6.0E-06 AAAACAAACATATTTT 16 V_HOXA2_01_M01402 TRANSFAC + 48392421 48392436 3.0E-06 AGGTCAATTAGCTAAA 16 V_HFH4_01_M00742 TRANSFAC - 48392434 48392446 0.0E+00 ATATGTTTGTTTT 13 V_EVX1_01_M01475 TRANSFAC - 48392448 48392464 9.0E-06 AATCCTAATGAGCTAAA 17 V_MEF2A_Q6_M02024 TRANSFAC + 48392444 48392453 1.0E-06 TATTTTTAGC 10 V_GC_01_M00255 TRANSFAC + 48392544 48392557 7.0E-06 ATGGGGTGGGGCTG 14 V_OCT1_02_M00136 TRANSFAC - 48392589 48392603 8.0E-06 AAGGATATGCAAGGA 15 V_HNF3G_Q4_M02015 TRANSFAC - 48392436 48392443 7.0E-06 TGTTTGTT 8 V_SOX7_04_M02911 TRANSFAC + 48392373 48392394 8.0E-06 GAAATCATTATCTGAGGATGTT 22 V_XFD3_01_M00269 TRANSFAC - 48392387 48392400 4.0E-06 TTGGTAAACATCCT 14 V_HOXA1_01_M01487 TRANSFAC - 48392421 48392436 9.0E-06 TTTAGCTAATTGACCT 16 V_HNF3_Q6_M00791 TRANSFAC + 48392433 48392445 1.0E-06 TAAAACAAACATA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 48392433 48392443 0.0E+00 TGTTTGTTTTA 11 V_GSH2_01_M01326 TRANSFAC + 48392421 48392436 2.0E-06 AGGTCAATTAGCTAAA 16 V_NKX25_Q5_M01043 TRANSFAC - 48392475 48392484 3.0E-06 TGTCACTTGA 10 V_MEF2_03_M00232 TRANSFAC - 48392438 48392459 1.0E-06 TAATGAGCTAAAAATATGTTTG 22 V_POU6F1_02_M01462 TRANSFAC - 48392448 48392464 5.0E-06 AATCCTAATGAGCTAAA 17 V_EOMES_04_M02851 TRANSFAC - 48392563 48392578 7.0E-06 CCGGAGGTGTTGGCAG 16 V_HNF1_01_M00132 TRANSFAC - 48392371 48392385 4.0E-06 AGATAATGATTTCCA 15 V_HDX_01_M01333 TRANSFAC + 48392368 48392384 8.0E-06 CTTTGGAAATCATTATC 17 V_ASCL2_04_M02841 TRANSFAC - 48392543 48392558 4.0E-06 CCAGCCCCACCCCATT 16 V_PLZF_02_M01075 TRANSFAC - 48392435 48392463 8.0E-06 ATCCTAATGAGCTAAAAATATGTTTGTTT 29 V_HFH3_01_M00289 TRANSFAC - 48392434 48392446 1.0E-06 ATATGTTTGTTTT 13 V_POU6F1_03_M01479 TRANSFAC - 48392448 48392464 3.0E-06 AATCCTAATGAGCTAAA 17 V_VAX1_01_M01397 TRANSFAC + 48392421 48392436 1.0E-06 AGGTCAATTAGCTAAA 16 V_FOXJ2_01_M00422 TRANSFAC + 48392431 48392448 5.0E-06 GCTAAAACAAACATATTT 18 V_HOXB3_01_M01330 TRANSFAC - 48392448 48392464 2.0E-06 AATCCTAATGAGCTAAA 17 V_BSX_01_M01442 TRANSFAC + 48392421 48392436 1.0E-06 AGGTCAATTAGCTAAA 16 V_S8_02_M01376 TRANSFAC + 48392420 48392436 1.0E-05 GAGGTCAATTAGCTAAA 17 V_HOXD3_01_M01338 TRANSFAC - 48392421 48392436 2.0E-06 TTTAGCTAATTGACCT 16 V_HNF1A_01_M02162 TRANSFAC - 48392372 48392385 5.0E-06 AGATAATGATTTCC 14 V_HOXB5_01_M01319 TRANSFAC + 48392421 48392436 2.0E-06 AGGTCAATTAGCTAAA 16 V_HOX13_02_M01452 TRANSFAC + 48392421 48392436 3.0E-06 AGGTCAATTAGCTAAA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.