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PRDM13 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 59336 PR domain containing 13 chr6 + 100049649 - 100055149 100054649 Transcription Factor Binding Sites   Download all TFBS in the PRDM13 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints PITX3_homeodomain_DBD_monomeric_9_1 SELEX + 100050644 100050652 1.0E-05 TTTAATCCC 9 NFIA_NFI_full_dimeric_15_1 SELEX + 100052904 100052918 4.0E-06 TTGGCCCGAGGCCAG 15 Pax6_MA0069.1 JASPAR + 100059313 100059326 3.0E-06 TTCACGATTCATTT 14 EN2_homeodomain_full_monomeric_10_1 SELEX + 100050650 100050659 7.0E-06 CCCAATTAGG 10 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 100050641 100050657 9.0E-06 TGCTTTAATCCCAATTA 17 PDX1_homeodomain_DBD_dimeric_18_1 SELEX - 100052097 100052114 1.0E-06 AAAATTAAATGAAATTAA 18 IRF7_IRF_DBD_trimeric_17_1 SELEX + 100050759 100050775 4.0E-06 GCAAGGAAAATCGAATT 17 Pax4_MA0068.1 JASPAR + 100052225 100052254 4.0E-06 GAAAAATAAAAGAAAATGTGTTCCTTTTCT 30 Pax4_MA0068.1 JASPAR + 100052228 100052257 9.0E-06 AAATAAAAGAAAATGTGTTCCTTTTCTCCT 30 PITX1_homeodomain_full_monomeric_8_1 SELEX + 100050645 100050652 1.0E-05 TTAATCCC 8 POU4F3_POU_DBD_monomeric_16_1 SELEX + 100059319 100059334 7.0E-06 ATTCATTTTACATGAA 16 RUNX3_RUNX_full_monomeric_10_1 SELEX + 100053332 100053341 1.0E-05 TAACCACAAT 10 IRF1_MA0050.1 JASPAR - 100052138 100052149 5.0E-06 AAAAGTAAAAGC 12 NFAT5_NFAT_DBD_dimeric_14_1 SELEX - 100052105 100052118 6.0E-06 ATGGAAAATTAAAT 14 PRDM4_C2H2_full_monomeric_13_1 SELEX - 100050974 100050986 8.0E-06 TTTTAAGTCCTCC 13 HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 100050644 100050658 8.0E-06 CTAATTGGGATTAAA 15 RHOXF1_homeodomain_full_monomeric_8_1 SELEX + 100050645 100050652 1.0E-05 TTAATCCC 8 PITX1_homeodomain_full_monomeric_9_1 SELEX + 100050644 100050652 4.0E-06 TTTAATCCC 9 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 100052136 100052150 4.0E-06 TAAAAGTAAAAGCGG 15 Hltf_MA0109.1 JASPAR + 100050949 100050958 6.0E-06 ATACTTTTAT 10 NFIB_NFI_full_dimeric_15_1 SELEX + 100052904 100052918 5.0E-06 TTGGCCCGAGGCCAG 15 Pou5f1_MA0142.1 JASPAR + 100059520 100059534 3.0E-06 TTGTGTTATGCAAAC 15 ELF5_MA0136.1 JASPAR - 100059251 100059259 9.0E-06 AACTTCCTT 9 Sox2_MA0143.1 JASPAR + 100059519 100059533 3.0E-06 CTTGTGTTATGCAAA 15 NFE2L2_MA0150.1 JASPAR - 100059171 100059181 7.0E-06 ATGACTCAGCT 11 TBX1_TBX_DBD_dimeric_20_1 SELEX - 100059302 100059321 2.0E-06 AATCGTGAAAAAAAGAGAGA 20 V_RUSH1A_02_M01107 TRANSFAC + 100050949 100050958 6.0E-06 ATACTTTTAT 10 V_NFAT_Q4_01_M00935 TRANSFAC - 100052109 100052118 1.0E-06 ATGGAAAATT 10 V_OBOX6_01_M01445 TRANSFAC - 100050643 100050657 5.0E-06 TAATTGGGATTAAAG 15 V_GEN_INI_B_M00315 TRANSFAC + 100059133 100059140 1.0E-05 CCTCATTT 8 V_OBOX5_05_M03066 TRANSFAC - 100050640 100050656 9.0E-06 AATTGGGATTAAAGCAC 17 V_ZFP410_04_M02936 TRANSFAC - 100050653 100050669 7.0E-06 GTCAGCCGCCCCTAATT 17 V_NKX29_01_M01352 TRANSFAC + 100050634 100050650 1.0E-06 TCCTAAGTGCTTTAATC 17 V_POU5F1_02_M02245 TRANSFAC + 100059520 100059534 3.0E-06 TTGTGTTATGCAAAC 15 V_HOXA13_02_M01297 TRANSFAC + 100052228 100052236 9.0E-06 AAATAAAAG 9 V_SPDEF_04_M02915 TRANSFAC - 100059247 100059262 8.0E-06 AATAACTTCCTTCTAA 16 V_CBF_02_M01080 TRANSFAC + 100051568 100051583 1.0E-05 AGAAGTGTGGTCTGAA 16 V_EOMES_03_M02747 TRANSFAC - 100052144 100052160 1.0E-05 GGCTGGGTGTTAAAAGT 17 V_IRF2_Q6_M01882 TRANSFAC + 100052224 100052239 5.0E-06 AGAAAAATAAAAGAAA 16 V_NFAT3_Q3_M01734 TRANSFAC + 100052108 100052117 7.0E-06 TAATTTTCCA 10 V_PITX2_Q6_M02114 TRANSFAC + 100050644 100050653 3.0E-06 TTTAATCCCA 10 V_AIRE_02_M01000 TRANSFAC - 100050883 100050907 1.0E-05 ACTTATTTCTTGGTTCTTTCGGTTG 25 V_LHX3A_01_M00510 TRANSFAC + 100052105 100052114 7.0E-06 ATTTAATTTT 10 V_HOXD13_01_M01404 TRANSFAC - 100050949 100050964 7.0E-06 GGCTCAATAAAAGTAT 16 V_NFAT2_01_M01748 TRANSFAC - 100052110 100052118 2.0E-06 ATGGAAAAT 9 V_BRN2_01_M00145 TRANSFAC - 100059319 100059334 0.0E+00 TTCATGTAAAATGAAT 16 V_TCFAP2E_04_M02926 TRANSFAC - 100059307 100059320 2.0E-06 ATCGTGAAAAAAAG 14 V_LHX8_01_M01440 TRANSFAC + 100050647 100050663 9.0E-06 AATCCCAATTAGGGGCG 17 V_AP1_Q6_M00174 TRANSFAC - 100059172 100059182 6.0E-06 AATGACTCAGC 11 V_BACH1_01_M00495 TRANSFAC + 100059170 100059184 6.0E-06 GAGCTGAGTCATTCT 15 V_OBOX5_02_M01480 TRANSFAC - 100050640 100050656 9.0E-06 AATTGGGATTAAAGCAC 17 V_GEN_INI3_B_M00314 TRANSFAC + 100059133 100059140 1.0E-05 CCTCATTT 8 V_POU3F2_01_M00463 TRANSFAC + 100050945 100050958 6.0E-06 CTGAATACTTTTAT 14 V_ZFP105_03_M02827 TRANSFAC + 100050980 100050994 2.0E-06 CTTAAAAAACAACAA 15 V_FKLF_Q5_M01837 TRANSFAC + 100059506 100059515 2.0E-06 GGGGTGGGAG 10 V_ZFP410_03_M02832 TRANSFAC - 100052111 100052127 0.0E+00 GCAAATGGGATGGAAAA 17 V_MYCMAX_02_M00123 TRANSFAC - 100051650 100051661 1.0E-05 GAGCACGTGTGA 12 V_SOX8_04_M02912 TRANSFAC - 100059324 100059337 0.0E+00 ACATTCATGTAAAA 14 V_DOBOX4_01_M01359 TRANSFAC - 100058996 100059012 4.0E-06 TTAATATATACTTTTTT 17 V_IRX4_01_M01410 TRANSFAC - 100059322 100059338 2.0E-06 AACATTCATGTAAAATG 17 V_AP1_Q6_01_M00925 TRANSFAC - 100059173 100059181 7.0E-06 ATGACTCAG 9 V_IRF_Q6_M00772 TRANSFAC - 100052230 100052244 9.0E-06 CACATTTTCTTTTAT 15 V_HNF1_Q6_01_M01011 TRANSFAC + 100058997 100059017 5.0E-06 AAAAAGTATATATTAAACGTA 21 V_TTF1_Q6_M00794 TRANSFAC - 100059474 100059485 5.0E-06 AACTCAAGTGAT 12 V_OBOX2_01_M01364 TRANSFAC - 100050641 100050657 1.0E-05 TAATTGGGATTAAAGCA 17 V_OCT1_04_M00138 TRANSFAC - 100050699 100050721 2.0E-06 TCATTTCTAGGCAAATGTATTCA 23 V_OCT1_04_M00138 TRANSFAC - 100059317 100059339 9.0E-06 GAACATTCATGTAAAATGAATCG 23 V_IK2_01_M00087 TRANSFAC - 100050645 100050656 2.0E-06 AATTGGGATTAA 12 V_AP1_C_M00199 TRANSFAC - 100059173 100059181 6.0E-06 ATGACTCAG 9 V_OCAB_Q6_M02113 TRANSFAC + 100059525 100059535 6.0E-06 TTATGCAAACC 11 V_MAFK_Q3_M02022 TRANSFAC - 100059170 100059180 1.0E-06 TGACTCAGCTC 11 V_AP1_01_M00517 TRANSFAC - 100059171 100059183 2.0E-06 GAATGACTCAGCT 13 V_TBP_06_M02814 TRANSFAC - 100058999 100059014 3.0E-06 GTTTAATATATACTTT 16 V_IRX3_01_M01318 TRANSFAC - 100059322 100059338 9.0E-06 AACATTCATGTAAAATG 17 V_LHX3b_01_M01971 TRANSFAC + 100052105 100052114 5.0E-06 ATTTAATTTT 10 V_NKX23_01_M01457 TRANSFAC + 100050634 100050649 4.0E-06 TCCTAAGTGCTTTAAT 16 V_NKX23_01_M01457 TRANSFAC - 100050634 100050649 4.0E-06 ATTAAAGCACTTAGGA 16 V_IRX5_01_M01472 TRANSFAC - 100059322 100059338 5.0E-06 AACATTCATGTAAAATG 17 V_SOX17_04_M02904 TRANSFAC - 100059325 100059341 0.0E+00 CTGAACATTCATGTAAA 17 V_MAF_Q6_01_M00983 TRANSFAC + 100059171 100059181 1.0E-06 AGCTGAGTCAT 11 V_GATA4_Q3_M00632 TRANSFAC + 100052228 100052239 7.0E-06 AAATAAAAGAAA 12 V_BCL6B_04_M02844 TRANSFAC - 100050653 100050668 8.0E-06 TCAGCCGCCCCTAATT 16 V_ZFP105_04_M02931 TRANSFAC - 100050950 100050966 7.0E-06 ACGGCTCAATAAAAGTA 17 V_IRX3_02_M01485 TRANSFAC - 100059322 100059338 4.0E-06 AACATTCATGTAAAATG 17 V_AP1_Q4_01_M00926 TRANSFAC + 100059174 100059181 1.0E-05 TGAGTCAT 8 V_MTF1_06_M02882 TRANSFAC + 100059138 100059151 2.0E-06 TTTTAAGAAAAAAG 14 V_ISX_01_M01331 TRANSFAC + 100050647 100050662 5.0E-06 AATCCCAATTAGGGGC 16 V_OBOX2_02_M03064 TRANSFAC - 100050641 100050657 1.0E-05 TAATTGGGATTAAAGCA 17 V_NKX3A_02_M01383 TRANSFAC - 100050633 100050649 5.0E-06 ATTAAAGCACTTAGGAG 17 V_NKX3A_02_M01383 TRANSFAC + 100050634 100050650 1.0E-06 TCCTAAGTGCTTTAATC 17 V_PITX1_01_M01484 TRANSFAC - 100050641 100050657 4.0E-06 TAATTGGGATTAAAGCA 17 V_GEN_INI2_B_M00313 TRANSFAC + 100059133 100059140 1.0E-05 CCTCATTT 8 V_AIRE_01_M00999 TRANSFAC - 100050880 100050905 0.0E+00 TTATTTCTTGGTTCTTTCGGTTGACA 26 V_FRA1_Q5_M01267 TRANSFAC + 100059174 100059181 1.0E-05 TGAGTCAT 8 V_NRF2_Q4_M00821 TRANSFAC + 100059170 100059182 7.0E-06 GAGCTGAGTCATT 13 V_FOXO3_01_M00477 TRANSFAC - 100050981 100050994 5.0E-06 TTGTTGTTTTTTAA 14 V_STAT1STAT1_Q3_M01212 TRANSFAC - 100050707 100050719 3.0E-06 ATTTCTAGGCAAA 13 V_PITX2_Q2_M00482 TRANSFAC + 100050644 100050654 0.0E+00 TTTAATCCCAA 11 V_FOX_Q2_M00809 TRANSFAC - 100058999 100059011 9.0E-06 TAATATATACTTT 13 V_BBX_03_M02739 TRANSFAC + 100052099 100052113 1.0E-06 AATTTCATTTAATTT 15 V_BBX_03_M02739 TRANSFAC - 100052099 100052113 0.0E+00 AAATTAAATGAAATT 15 V_BBX_03_M02739 TRANSFAC - 100058921 100058935 6.0E-06 AAATACATTTAACAA 15 V_EGR1_06_M02744 TRANSFAC + 100059126 100059139 5.0E-06 ACTGCCCCCTCATT 14 V_IRX2_01_M01405 TRANSFAC - 100059322 100059338 8.0E-06 AACATTCATGTAAAATG 17 V_SOX2_01_M02246 TRANSFAC + 100059519 100059533 3.0E-06 CTTGTGTTATGCAAA 15 V_SRF_06_M02916 TRANSFAC + 100050979 100050995 3.0E-06 ACTTAAAAAACAACAAA 17 V_SRF_06_M02916 TRANSFAC + 100050980 100050996 1.0E-06 CTTAAAAAACAACAAAA 17 V_SRF_06_M02916 TRANSFAC + 100052222 100052238 4.0E-06 GAAGAAAAATAAAAGAA 17 V_SRF_06_M02916 TRANSFAC + 100059137 100059153 5.0E-06 ATTTTAAGAAAAAAGCT 17 V_SRF_06_M02916 TRANSFAC + 100059138 100059154 3.0E-06 TTTTAAGAAAAAAGCTT 17 V_NFE2_Q6_M02104 TRANSFAC - 100059167 100059182 1.0E-06 AATGACTCAGCTCAAT 16 V_NFE2_01_M00037 TRANSFAC + 100059171 100059181 1.0E-06 AGCTGAGTCAT 11 V_IRF1_01_M00062 TRANSFAC - 100052138 100052150 2.0E-06 TAAAAGTAAAAGC 13 V_IRF1_01_M00062 TRANSFAC + 100052225 100052237 5.0E-06 GAAAAATAAAAGA 13 V_CTF1_01_M01196 TRANSFAC - 100052904 100052917 6.0E-06 TGGCCTCGGGCCAA 14 V_CTF1_01_M01196 TRANSFAC + 100052905 100052918 8.0E-06 TGGCCCGAGGCCAG 14 V_NFE2L2_01_M02263 TRANSFAC - 100059171 100059181 7.0E-06 ATGACTCAGCT 11 V_ELF5_04_M02241 TRANSFAC - 100059251 100059259 9.0E-06 AACTTCCTT 9 V_HOXA10_01_M01464 TRANSFAC - 100052102 100052117 9.0E-06 TGGAAAATTAAATGAA 16 V_HOXD10_01_M01375 TRANSFAC - 100050948 100050964 6.0E-06 GGCTCAATAAAAGTATT 17 V_OBOX6_02_M03068 TRANSFAC - 100050643 100050657 5.0E-06 TAATTGGGATTAAAG 15 V_IRXB3_01_M01377 TRANSFAC - 100059322 100059338 8.0E-06 AACATTCATGTAAAATG 17 V_TCF3_05_M02920 TRANSFAC + 100052218 100052232 4.0E-06 AGGGGAAGAAAAATA 15 TLX1_NFIC_MA0119.1 JASPAR - 100052904 100052917 6.0E-06 TGGCCTCGGGCCAA 14 TLX1_NFIC_MA0119.1 JASPAR + 100052905 100052918 8.0E-06 TGGCCCGAGGCCAG 14 V_ATATA_B_M00311 TRANSFAC + 100058016 100058025 7.0E-06 CTACTTAAGT 10 V_PAX4_04_M00380 TRANSFAC + 100052225 100052254 7.0E-06 GAAAAATAAAAGAAAATGTGTTCCTTTTCT 30 V_PAX6_01_M00097 TRANSFAC + 100059309 100059329 1.0E-06 TTTTTTCACGATTCATTTTAC 21 V_NANOG_02_M01247 TRANSFAC + 100052216 100052235 9.0E-06 TTAGGGGAAGAAAAATAAAA 20 V_NANOG_02_M01247 TRANSFAC + 100052222 100052241 2.0E-06 GAAGAAAAATAAAAGAAAAT 20 V_OCT4_01_M01125 TRANSFAC + 100059520 100059534 2.0E-06 TTGTGTTATGCAAAC 15 V_OTX3_01_M01403 TRANSFAC - 100050641 100050657 6.0E-06 TAATTGGGATTAAAGCA 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.