Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

RAPSN


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
5913 receptor-associated protein of the synapse chr11 -47470230 - 47475730 47470730

Transcription Factor Binding Sites

 
Download all TFBS in the RAPSN promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
SP3_C2H2_DBD_monomeric_11_1 SELEX + 47473727 47473737 6.0E-06 ACCACACCCAC 11
ESR2_MA0258.1 JASPAR + 47470760 47470777 7.0E-06 CAAGGTCACGTGGGCCTC 18
SP1_C2H2_DBD_monomeric_11_1 SELEX + 47473727 47473737 1.0E-06 ACCACACCCAC 11
Myf_MA0055.1 JASPAR - 47470707 47470718 8.0E-06 CGACAGCTGCAG 12
REST_MA0138.2 JASPAR + 47471318 47471338 4.0E-06 AGAAGGACTTAGGACAGTGCC 21
TEAD1_MA0090.1 JASPAR - 47470743 47470754 7.0E-06 GACATTCCTCAG 12
V_DMRT4_01_M01149 TRANSFAC - 47473654 47473666 4.0E-06 AATGTAACAGTTG 13
V_E2A_Q6_01_M02088 TRANSFAC - 47470706 47470718 8.0E-06 CGACAGCTGCAGA 13
V_DMRT3_01_M01148 TRANSFAC + 47473654 47473668 6.0E-06 CAACTGTTACATTCT 15
V_EBOX_Q6_01_M01034 TRANSFAC - 47470763 47470772 2.0E-06 CCACGTGACC 10
V_CMYB_Q5_M01821 TRANSFAC - 47470720 47470730 5.0E-06 CCCAACTGGCA 11
V_MYF_01_M01302 TRANSFAC - 47470707 47470718 8.0E-06 CGACAGCTGCAG 12
V_SREBP_Q6_M01168 TRANSFAC - 47470538 47470552 1.0E-06 GGGATCACCCCACGT 15
V_REST_01_M01256 TRANSFAC - 47471321 47471342 0.0E+00 GCCGGGCACTGTCCTAAGTCCT 22
V_DAX1_01_M01248 TRANSFAC + 47470754 47470773 8.0E-06 CAGCAGCAAGGTCACGTGGG 20
V_TEF_01_M01305 TRANSFAC - 47470743 47470754 7.0E-06 GACATTCCTCAG 12
V_USF_Q6_01_M00796 TRANSFAC - 47470763 47470774 5.0E-06 GCCCACGTGACC 12
V_AP4_01_M00005 TRANSFAC - 47470703 47470720 1.0E-06 AGCGACAGCTGCAGACGG 18
V_TAL1_01_M01591 TRANSFAC + 47473712 47473724 2.0E-06 ATTCCTTCTCTGT 13
V_TEF1_Q6_03_M01817 TRANSFAC + 47470745 47470753 3.0E-06 GAGGAATGT 9
V_ERR2_01_M01589 TRANSFAC + 47470759 47470770 7.0E-06 GCAAGGTCACGT 12
V_REST_02_M02256 TRANSFAC + 47471318 47471338 4.0E-06 AGAAGGACTTAGGACAGTGCC 21
V_SREBP_Q3_M00776 TRANSFAC - 47470541 47470552 1.0E-06 GGGATCACCCCA 12
V_SREBP1_02_M00221 TRANSFAC - 47470540 47470550 1.0E-06 GATCACCCCAC 11
V_ERR1_Q2_01_M02093 TRANSFAC + 47470760 47470770 2.0E-06 CAAGGTCACGT 11
V_EKLF_Q5_M01874 TRANSFAC + 47473728 47473737 9.0E-06 CCACACCCAC 10
V_SREBP1_Q5_M01173 TRANSFAC - 47470538 47470552 1.0E-06 GGGATCACCCCACGT 15
V_DMRT5_01_M01150 TRANSFAC - 47473653 47473667 5.0E-06 GAATGTAACAGTTGC 15
V_ESR2_01_M02377 TRANSFAC + 47470760 47470777 7.0E-06 CAAGGTCACGTGGGCCTC 18
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL