Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

IL22RA1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 58985 interleukin 22 receptor, alpha 1 chr1 - 24469275 - 24474775 24469775 Transcription Factor Binding Sites   Download all TFBS in the IL22RA1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 24468310 24468323 7.0E-06 GGCAACTTGTTTTT 14 FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 24468310 24468323 7.0E-06 AAAAACAAGTTGCC 14 FOXJ2_forkhead_DBD_monomeric_8_1 SELEX - 24469826 24469833 5.0E-06 ATAAACAA 8 FOXL1_forkhead_full_dimeric_13_1 SELEX + 24468378 24468390 3.0E-06 AATACACAAACAA 13 ZNF435_C2H2_full_dimeric_18_1 SELEX - 24468343 24468360 6.0E-06 CTGGTTGACAGAACATTG 18 TBX19_TBX_DBD_dimeric_20_1 SELEX + 24468322 24468341 9.0E-06 TTTCACATTCATGTGGAAAA 20 TBX19_TBX_DBD_dimeric_20_1 SELEX - 24468322 24468341 6.0E-06 TTTTCCACATGAATGTGAAA 20 EWSR1-FLI1_MA0149.1 JASPAR - 24468166 24468183 4.0E-06 GAAAAGGAGCGAGGAGGG 18 Pax4_MA0068.1 JASPAR + 24468374 24468403 1.0E-06 GAAAAATACACAAACAAGAAACAATTCCAC 30 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 24468379 24468389 6.0E-06 ATACACAAACA 11 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 24468371 24468384 6.0E-06 AAGGAAAAATACAC 14 NFATC1_NFAT_full_dimeric_20_1 SELEX + 24468333 24468352 5.0E-06 TGTGGAAAAACAATGTTCTG 20 NFATC1_NFAT_full_dimeric_20_1 SELEX - 24468335 24468354 8.0E-06 GACAGAACATTGTTTTTCCA 20 SOX9_HMG_full_dimeric_16_3 SELEX + 24468341 24468356 4.0E-06 AACAATGTTCTGTCAA 16 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 24468379 24468389 8.0E-06 ATACACAAACA 11 Foxj3_forkhead_DBD_monomeric_8_1 SELEX - 24469826 24469833 5.0E-06 ATAAACAA 8 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 24468377 24468389 2.0E-06 AAATACACAAACA 13 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 24468383 24468396 5.0E-06 ACAAACAAGAAACA 14 V_NFAT_Q4_01_M00935 TRANSFAC + 24468334 24468343 9.0E-06 GTGGAAAAAC 10 V_FOXP1_01_M00987 TRANSFAC - 24468371 24468390 1.0E-06 TTGTTTGTGTATTTTTCCTT 20 V_HNF3B_01_M00131 TRANSFAC - 24468380 24468394 5.0E-06 TTTCTTGTTTGTGTA 15 V_FREAC7_01_M00293 TRANSFAC + 24468378 24468393 1.0E-06 AATACACAAACAAGAA 16 V_NFAT3_Q3_M01734 TRANSFAC - 24468372 24468381 4.0E-06 TATTTTTCCT 10 V_FOXO3A_Q1_M01137 TRANSFAC - 24468313 24468324 3.0E-06 AAAAAACAAGTT 12 V_HNF3_Q6_01_M01012 TRANSFAC - 24468377 24468394 2.0E-06 TTTCTTGTTTGTGTATTT 18 V_FOXJ1_03_M02750 TRANSFAC + 24468376 24468391 3.0E-06 AAAATACACAAACAAG 16 V_SP1_02_M01303 TRANSFAC + 24469671 24469681 3.0E-06 GGGGCGGGGAG 11 V_FOXP3_01_M01599 TRANSFAC - 24469826 24469833 5.0E-06 ATAAACAA 8 V_CDX_Q5_M00991 TRANSFAC - 24469964 24469981 9.0E-06 TAAAGCAAAAGATATGTA 18 V_CEBPB_01_M00109 TRANSFAC + 24468247 24468260 0.0E+00 ATATTGTGAAATCT 14 V_HMGA2_01_M01300 TRANSFAC - 24469897 24469911 7.0E-06 ATATCGTGGATTATT 15 V_HELIOSA_02_M01004 TRANSFAC + 24468369 24468379 6.0E-06 CTAAGGAAAAA 11 V_TEF_Q6_M00672 TRANSFAC + 24469974 24469985 9.0E-06 TTGCTTTAATAA 12 V_NFAT_Q6_M00302 TRANSFAC + 24468369 24468380 6.0E-06 CTAAGGAAAAAT 12 V_IRF3_Q3_M01279 TRANSFAC - 24468370 24468382 9.0E-06 GTATTTTTCCTTA 13 V_MAZ_Q6_01_M02023 TRANSFAC - 24468153 24468166 9.0E-06 GTGGGAGAAGAGGG 14 V_GR_Q6_M00192 TRANSFAC + 24468335 24468353 6.0E-06 TGGAAAAACAATGTTCTGT 19 V_SOX12_04_M02900 TRANSFAC + 24468377 24468392 3.0E-06 AAATACACAAACAAGA 16 V_FOXO1_Q5_M01216 TRANSFAC - 24468315 24468323 8.0E-06 AAAAACAAG 9 V_SOX17_04_M02904 TRANSFAC + 24468322 24468338 2.0E-06 TTTCACATTCATGTGGA 17 V_SOX17_04_M02904 TRANSFAC + 24469957 24469973 9.0E-06 CACCACATACATATCTT 17 V_ZFP105_04_M02931 TRANSFAC + 24469974 24469990 2.0E-06 TTGCTTTAATAATTCTA 17 V_MYOD_01_M00001 TRANSFAC + 24468265 24468276 7.0E-06 AGACATGTGTTG 12 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 24468162 24468170 8.0E-06 GAGGGTGGG 9 V_FOXL1_02_M02857 TRANSFAC - 24469970 24469985 8.0E-06 TTATTAAAGCAAAAGA 16 V_ASCL2_04_M02841 TRANSFAC - 24469668 24469683 2.0E-06 TTCTCCCCGCCCCATG 16 V_FOX_Q2_M00809 TRANSFAC - 24468376 24468388 2.0E-06 GTTTGTGTATTTT 13 V_CEBPB_Q6_M01896 TRANSFAC + 24468250 24468259 7.0E-06 TTGTGAAATC 10 V_SRF_06_M02916 TRANSFAC - 24468313 24468329 5.0E-06 ATGTGAAAAAACAAGTT 17 V_HFH3_01_M00289 TRANSFAC - 24468380 24468392 4.0E-06 TCTTGTTTGTGTA 13 V_EWSR1FLI1_01_M02252 TRANSFAC - 24468166 24468183 4.0E-06 GAAAAGGAGCGAGGAGGG 18 V_FOXJ2_01_M00422 TRANSFAC + 24468377 24468394 5.0E-06 AAATACACAAACAAGAAA 18 V_FOXO1_01_M00473 TRANSFAC - 24468315 24468324 5.0E-06 AAAAAACAAG 10 V_SOX2_Q6_M01272 TRANSFAC - 24468337 24468352 7.0E-06 CAGAACATTGTTTTTC 16 V_FOXO4_01_M00472 TRANSFAC - 24468313 24468323 4.0E-06 AAAAACAAGTT 11 V_FOXO4_01_M00472 TRANSFAC - 24469823 24469833 1.0E-06 ATAAACAAGCC 11 V_CEBP_Q2_01_M00912 TRANSFAC - 24468247 24468258 2.0E-06 ATTTCACAATAT 12 V_TAACC_B_M00331 TRANSFAC - 24469970 24469992 6.0E-06 AATAGAATTATTAAAGCAAAAGA 23 V_GLIS2_04_M02863 TRANSFAC - 24469976 24469989 8.0E-06 AGAATTATTAAAGC 14 V_PAX4_04_M00380 TRANSFAC + 24468374 24468403 3.0E-06 GAAAAATACACAAACAAGAAACAATTCCAC 30

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.