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RAB5C Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5878 RAB5C, member RAS oncogene family chr17 - 40306562 - 40312062 40307062 Transcription Factor Binding Sites   Download all TFBS in the RAB5C promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints GABPA_MA0062.2 JASPAR - 40306999 40307009 9.0E-06 GCGGAAGTGGA 11 Mafb_bZIP_DBD_monomeric_12_1 SELEX + 40307521 40307532 7.0E-06 AAAGTGCTGAGA 12 EWSR1-FLI1_MA0149.1 JASPAR + 40306391 40306408 1.0E-06 GAAAGAGAGGAAGTAAGG 18 STAT1_MA0137.2 JASPAR - 40306333 40306347 1.0E-05 CACTTACTAGAAATG 15 SPIB_ETS_DBD_monomeric_14_1 SELEX + 40306392 40306405 2.0E-06 AAAGAGAGGAAGTA 14 SPIB_ETS_DBD_monomeric_14_1 SELEX - 40307001 40307014 2.0E-06 GAAAGGCGGAAGTG 14 TCF7L1_HMG_full_monomeric_12_1 SELEX + 40307849 40307860 1.0E-06 TGAGATCAAAGG 12 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 40306342 40306357 9.0E-06 TAAGTGACTTTAAACT 16 LEF1_HMG_DBD_monomeric_15_1 SELEX + 40307849 40307863 1.0E-06 TGAGATCAAAGGGAG 15 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 40306342 40306357 9.0E-06 TAAGTGACTTTAAACT 16 ELF3_ETS_full_monomeric_13_1 SELEX - 40307000 40307012 6.0E-06 AAGGCGGAAGTGG 13 SP1_MA0079.2 JASPAR - 40306158 40306167 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 40306466 40306475 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR - 40306803 40306812 3.0E-06 CCCCTCCCCC 10 Tcf7_HMG_DBD_monomeric_12_1 SELEX + 40307849 40307860 1.0E-06 TGAGATCAAAGG 12 EHF_ETS_full_monomeric_12_1 SELEX - 40307001 40307012 1.0E-05 AAGGCGGAAGTG 12 NR3C1_MA0113.1 JASPAR - 40307261 40307278 9.0E-06 AAAAAAAAAAAGTTCCGG 18 ETV6_ETS_full_monomeric_10_1 SELEX - 40307001 40307010 9.0E-06 GGCGGAAGTG 10 SPI1_ETS_full_monomeric_14_1 SELEX + 40306392 40306405 2.0E-06 AAAGAGAGGAAGTA 14 SPI1_ETS_full_monomeric_14_1 SELEX - 40307001 40307014 2.0E-06 GAAAGGCGGAAGTG 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 40307268 40307280 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 40307269 40307281 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 40307270 40307282 6.0E-06 AAAAAAAAAAAAA 13 V_SPI1_01_M01203 TRANSFAC + 40306392 40306408 3.0E-06 AAAGAGAGGAAGTAAGG 17 V_SPI1_01_M01203 TRANSFAC - 40306998 40307014 1.0E-06 GAAAGGCGGAAGTGGAG 17 V_STAT5A_Q6_M01890 TRANSFAC + 40306332 40306344 3.0E-06 TCATTTCTAGTAA 13 V_LEF1_04_M02774 TRANSFAC - 40307848 40307864 0.0E+00 TCTCCCTTTGATCTCAC 17 V_ZFP410_04_M02936 TRANSFAC + 40307042 40307058 1.0E-06 CCGCCCCGCCCCTCAAT 17 V_HMGIY_Q3_M01010 TRANSFAC + 40307266 40307280 1.0E-05 ACTTTTTTTTTTTTT 15 V_EVI1_04_M00081 TRANSFAC - 40307268 40307282 6.0E-06 AAAAAAAAAAAAAAA 15 V_BCL6_01_M01183 TRANSFAC + 40307267 40307282 2.0E-06 CTTTTTTTTTTTTTTT 16 V_SPIB_02_M02041 TRANSFAC + 40306396 40306405 1.0E-06 AGAGGAAGTA 10 V_LMAF_Q2_M01139 TRANSFAC - 40311962 40311970 6.0E-06 GGTCAGCAG 9 V_TCF4_Q5_01_M02033 TRANSFAC + 40307853 40307862 5.0E-06 ATCAAAGGGA 10 V_GABP_B_M00341 TRANSFAC - 40306999 40307010 9.0E-06 GGCGGAAGTGGA 12 V_SP1_Q6_01_M00931 TRANSFAC - 40307044 40307053 4.0E-06 GGGGCGGGGC 10 V_SP1_03_M02281 TRANSFAC - 40306158 40306167 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 40306466 40306475 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC - 40306803 40306812 3.0E-06 CCCCTCCCCC 10 V_PU1_Q4_M01172 TRANSFAC - 40306393 40306411 0.0E+00 ACTCCTTACTTCCTCTCTT 19 V_PU1_Q4_M01172 TRANSFAC + 40306995 40307013 5.0E-06 GGCCTCCACTTCCGCCTTT 19 V_NR3C1_01_M02219 TRANSFAC - 40307261 40307278 9.0E-06 AAAAAAAAAAAGTTCCGG 18 V_TCFAP2E_04_M02926 TRANSFAC - 40307267 40307280 4.0E-06 AAAAAAAAAAAAAG 14 V_TCFAP2E_04_M02926 TRANSFAC - 40307268 40307281 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 40307269 40307282 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 40307270 40307283 2.0E-06 CAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 40307271 40307284 3.0E-06 TCAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 40307272 40307285 2.0E-06 CTCAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 40307274 40307287 2.0E-06 GTCTCAAAAAAAAA 14 V_SPIC_01_M02042 TRANSFAC + 40306396 40306405 1.0E-06 AGAGGAAGTA 10 V_ELF4_04_M02850 TRANSFAC - 40307264 40307280 6.0E-06 AAAAAAAAAAAAAGTTC 17 V_ELF4_04_M02850 TRANSFAC - 40307266 40307282 8.0E-06 AAAAAAAAAAAAAAAGT 17 V_ELF4_04_M02850 TRANSFAC - 40307268 40307284 2.0E-06 TCAAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 40307269 40307285 3.0E-06 CTCAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 40307270 40307286 0.0E+00 TCTCAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 40307271 40307287 1.0E-06 GTCTCAAAAAAAAAAAA 17 V_GC_01_M00255 TRANSFAC - 40307042 40307055 9.0E-06 GAGGGGCGGGGCGG 14 V_TCF3_04_M02816 TRANSFAC + 40307848 40307864 2.0E-06 GTGAGATCAAAGGGAGA 17 V_SPI1_03_M02078 TRANSFAC + 40306396 40306405 1.0E-06 AGAGGAAGTA 10 V_ZFP105_03_M02827 TRANSFAC - 40307265 40307279 1.0E-06 AAAAAAAAAAAAGTT 15 V_ZFP105_03_M02827 TRANSFAC - 40307266 40307280 2.0E-06 AAAAAAAAAAAAAGT 15 V_ZFP105_03_M02827 TRANSFAC - 40307267 40307281 0.0E+00 AAAAAAAAAAAAAAG 15 V_ZFP105_03_M02827 TRANSFAC - 40307268 40307282 0.0E+00 AAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 40307269 40307283 1.0E-06 CAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 40307270 40307284 2.0E-06 TCAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 40307271 40307285 1.0E-06 CTCAAAAAAAAAAAA 15 V_BEL1_B_M00312 TRANSFAC + 40307521 40307548 9.0E-06 AAAGTGCTGAGATTACAGGCCTGAGCCA 28 V_HIC1_06_M02867 TRANSFAC - 40306178 40306193 5.0E-06 GGATGTGCCCATTCAT 16 V_ZBP89_Q4_M01816 TRANSFAC + 40306467 40306476 4.0E-06 CCCTCCCCCA 10 V_SP1_Q6_M00196 TRANSFAC - 40307043 40307055 2.0E-06 GAGGGGCGGGGCG 13 V_FOXK1_04_M02856 TRANSFAC + 40306270 40306284 5.0E-06 CAAAGAACAACATAA 15 V_TCF7_03_M02817 TRANSFAC + 40307848 40307864 2.0E-06 GTGAGATCAAAGGGAGA 17 V_PBX1_05_M01967 TRANSFAC + 40307066 40307079 2.0E-06 GGTGATTGACAGTG 14 V_KLF7_03_M02773 TRANSFAC + 40307041 40307056 8.0E-06 TCCGCCCCGCCCCTCA 16 V_MZF1_02_M00084 TRANSFAC + 40306158 40306170 3.0E-06 GGGGGAGGGGAAA 13 V_ISGF4G_04_M02875 TRANSFAC + 40306314 40306327 3.0E-06 GCAAAACAGGAAAA 14 V_GATA4_Q3_M00632 TRANSFAC + 40307851 40307862 2.0E-06 AGATCAAAGGGA 12 V_BCL6B_04_M02844 TRANSFAC + 40307043 40307058 5.0E-06 CGCCCCGCCCCTCAAT 16 V_SP4_Q5_M01273 TRANSFAC + 40307044 40307054 8.0E-06 GCCCCGCCCCT 11 V_ELF1_Q6_M00746 TRANSFAC + 40306316 40306327 2.0E-06 AAAACAGGAAAA 12 V_MTF1_06_M02882 TRANSFAC - 40307267 40307280 1.0E-06 AAAAAAAAAAAAAG 14 V_MTF1_06_M02882 TRANSFAC - 40307268 40307281 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 40307269 40307282 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 40307270 40307283 8.0E-06 CAAAAAAAAAAAAA 14 V_LEF1_Q2_01_M01022 TRANSFAC + 40307852 40307861 3.0E-06 GATCAAAGGG 10 V_MAZR_01_M00491 TRANSFAC + 40306158 40306170 1.0E-05 GGGGGAGGGGAAA 13 V_MAZR_01_M00491 TRANSFAC + 40306803 40306815 1.0E-05 GGGGGAGGGGTCA 13 V_GABPBETA_Q3_M01876 TRANSFAC + 40306396 40306406 7.0E-06 AGAGGAAGTAA 11 V_AP4_01_M00005 TRANSFAC + 40306353 40306370 9.0E-06 AAACTCAGCTGAGGTCCT 18 V_FAC1_01_M00456 TRANSFAC - 40307268 40307281 3.0E-06 AAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC - 40307269 40307282 3.0E-06 AAAAAAAAAAAAAA 14 V_SPIC_02_M02077 TRANSFAC + 40306396 40306405 1.0E-06 AGAGGAAGTA 10 V_STAT6_02_M00500 TRANSFAC - 40306478 40306485 1.0E-05 GATTTCCT 8 V_ETS1_B_M00339 TRANSFAC + 40306396 40306410 9.0E-06 AGAGGAAGTAAGGAG 15 V_ZFP281_01_M01597 TRANSFAC + 40306157 40306167 2.0E-06 GGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 40306466 40306476 1.0E-06 TGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 40306802 40306812 7.0E-06 CGGGGGAGGGG 11 V_LEF1TCF1_Q4_M00978 TRANSFAC - 40307850 40307860 2.0E-06 CCTTTGATCTC 11 V_ZFP281_04_M02831 TRANSFAC - 40306155 40306169 5.0E-06 TTCCCCTCCCCCCTT 15 V_SRF_06_M02916 TRANSFAC - 40307264 40307280 0.0E+00 AAAAAAAAAAAAAGTTC 17 V_SRF_06_M02916 TRANSFAC - 40307265 40307281 0.0E+00 AAAAAAAAAAAAAAGTT 17 V_SRF_06_M02916 TRANSFAC - 40307266 40307282 0.0E+00 AAAAAAAAAAAAAAAGT 17 V_SRF_06_M02916 TRANSFAC - 40307267 40307283 0.0E+00 CAAAAAAAAAAAAAAAG 17 V_SRF_06_M02916 TRANSFAC - 40307268 40307284 0.0E+00 TCAAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 40307269 40307285 0.0E+00 CTCAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 40307270 40307286 0.0E+00 TCTCAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 40307271 40307287 2.0E-06 GTCTCAAAAAAAAAAAA 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 40306391 40306408 1.0E-06 GAAAGAGAGGAAGTAAGG 18 V_SP1_Q2_01_M00933 TRANSFAC + 40307045 40307054 7.0E-06 CCCCGCCCCT 10 V_SP1_Q4_01_M00932 TRANSFAC - 40307043 40307055 4.0E-06 GAGGGGCGGGGCG 13 V_TCF3_05_M02920 TRANSFAC - 40307272 40307286 4.0E-06 TCTCAAAAAAAAAAA 15 V_STAT1_05_M01260 TRANSFAC - 40306326 40306347 6.0E-06 CACTTACTAGAAATGAGCTGTT 22 V_STAT1_05_M01260 TRANSFAC + 40306333 40306354 1.0E-06 CATTTCTAGTAAGTGACTTTAA 22 V_SPI1_02_M02043 TRANSFAC + 40306396 40306405 1.0E-06 AGAGGAAGTA 10 V_SPIB_03_M02076 TRANSFAC + 40306396 40306405 1.0E-06 AGAGGAAGTA 10 V_NANOG_02_M01247 TRANSFAC - 40307265 40307284 4.0E-06 TCAAAAAAAAAAAAAAAGTT 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.