Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

RABGGTA


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
5875 Rab geranylgeranyltransferase, alpha subunit chr14 -24740333 - 24745833 24740833

Transcription Factor Binding Sites

 
Download all TFBS in the RABGGTA promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
HINFP1_C2H2_full_dimeric_19_1 SELEX + 24740719 24740737 5.0E-06 GCGGAGCTGCGGCGCCCGC 19
MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 24743463 24743480 2.0E-06 CTAATCACATTGTGATTA 18
MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 24743464 24743481 1.0E-06 CTAATCACAATGTGATTA 18
RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 24740127 24740142 3.0E-06 GAAGGTGAAGACGTCA 16
Zfp652_C2H2_DBD_monomeric_13_1 SELEX + 24742838 24742850 6.0E-06 GGAAAGAGTTAAG 13
POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 24742892 24742900 8.0E-06 TATGCAAAA 9
ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 24743775 24743786 1.0E-05 ACTTATCCCACA 12
POU2F3_POU_DBD_monomeric_9_1 SELEX - 24742892 24742900 8.0E-06 TATGCAAAA 9
GLI2_C2H2_DBD_monomeric_14_1 SELEX - 24743337 24743350 9.0E-06 GACCACCAACAAAA 14
GATA5_GATA_DBD_monomeric_8_1 SELEX + 24743693 24743700 7.0E-06 AGATAAGA 8
GATA4_GATA_DBD_monomeric_8_1 SELEX + 24743693 24743700 7.0E-06 AGATAAGA 8
Pou2f2_POU_DBD_monomeric_9_1 SELEX - 24742892 24742900 7.0E-06 TATGCAAAA 9
SPIB_ETS_DBD_monomeric_14_1 SELEX + 24743518 24743531 7.0E-06 TAAGAGAGGAAGTG 14
MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 24743710 24743723 3.0E-06 CTTATTATCATCAG 14
IRF1_MA0050.1 JASPAR + 24743637 24743648 6.0E-06 GAAAGCCAAACT 12
RELA_MA0107.1 JASPAR + 24741098 24741107 5.0E-06 GGGAGTTTCC 10
SP1_MA0079.2 JASPAR + 24740668 24740677 7.0E-06 CCCCGCCCCC 10
Gfi_MA0038.1 JASPAR - 24742198 24742207 3.0E-06 AAAATCACAG 10
ELK1_ETS_full_dimeric_17_1 SELEX + 24740817 24740833 5.0E-06 GACTTGCGGCGGAAGAG 17
ELK1_ETS_full_dimeric_17_1 SELEX - 24740817 24740833 4.0E-06 CTCTTCCGCCGCAAGTC 17
SP4_C2H2_full_monomeric_17_1 SELEX + 24740399 24740415 1.0E-06 GTAGCCCCGCCCCTACT 17
SP4_C2H2_full_monomeric_17_1 SELEX + 24740414 24740430 9.0E-06 CTAGCTCCGCCCACAGC 17
Gata1_MA0035.2 JASPAR + 24743691 24743701 7.0E-06 GGAGATAAGAG 11
GATA3_GATA_full_monomeric_8_1 SELEX + 24743693 24743700 7.0E-06 AGATAAGA 8
TEAD3_TEA_DBD_dimeric_17_1 SELEX - 24743596 24743612 1.0E-06 ACATACCTGAAATACCC 17
Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 24743463 24743480 2.0E-06 CTAATCACATTGTGATTA 18
Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 24743464 24743481 1.0E-06 CTAATCACAATGTGATTA 18
VENTX_homeodomain_DBD_dimeric_21_1 SELEX + 24743461 24743481 1.0E-06 CACTAATCACATTGTGATTAG 21
VENTX_homeodomain_DBD_dimeric_21_1 SELEX - 24743463 24743483 0.0E+00 TGCTAATCACAATGTGATTAG 21
Pou5f1_MA0142.1 JASPAR - 24743546 24743560 8.0E-06 TTCTCTGATGCAGAT 15
TEAD1_TEA_full_dimeric_17_1 SELEX - 24743596 24743612 0.0E+00 ACATACCTGAAATACCC 17
FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 24741254 24741264 1.0E-05 TTTCCTCACCC 11
VDR_nuclearreceptor_full_dimeric_16_1 SELEX + 24740233 24740248 1.0E-05 AGGTTCATACGGGGCA 16
REST_MA0138.2 JASPAR - 24740310 24740330 1.0E-06 GCCGGCACCATGGTGAGAACC 21
Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 24740127 24740141 6.0E-06 AAGGTGAAGACGTCA 15
MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 24743463 24743480 2.0E-06 CTAATCACATTGTGATTA 18
MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 24743464 24743481 1.0E-06 CTAATCACAATGTGATTA 18
BATF3_bZIP_DBD_dimeric_14_1 SELEX + 24740124 24740137 8.0E-06 TTCTGACGTCTTCA 14
BATF3_bZIP_DBD_dimeric_14_1 SELEX - 24740124 24740137 9.0E-06 TGAAGACGTCAGAA 14
SOX9_HMG_full_dimeric_17_1 SELEX - 24742193 24742209 6.0E-06 AAAAAATCACAGTCTTT 17
V_CEBPG_Q6_M00622 TRANSFAC + 24743535 24743547 2.0E-06 CTCATGAAAAAAT 13
V_NFKAPPAB65_01_M00052 TRANSFAC + 24741098 24741107 7.0E-06 GGGAGTTTCC 10
V_ER_Q6_02_M00959 TRANSFAC - 24743025 24743035 6.0E-06 CAGGTCACACT 11
V_TGIF_01_M00418 TRANSFAC + 24743746 24743756 8.0E-06 AGTTGTCAGGA 11
V_ZSCAN4_03_M02838 TRANSFAC + 24742908 24742924 0.0E+00 GGGATGTGCACACACAC 17
V_ZSCAN4_03_M02838 TRANSFAC + 24743371 24743387 5.0E-06 GCTCTGTGCACACTCAT 17
V_FOXP3_Q4_M00992 TRANSFAC - 24740203 24740219 6.0E-06 GTGGGGTTTTTGCAGGT 17
V_NFKB_Q6_01_M00774 TRANSFAC - 24741097 24741112 1.0E-05 TGACAGGAAACTCCCC 16
V_GATA1_Q6_M02004 TRANSFAC + 24743688 24743702 9.0E-06 TTTGGAGATAAGAGC 15
V_ZFP410_04_M02936 TRANSFAC + 24740400 24740416 6.0E-06 TAGCCCCGCCCCTACTA 17
V_GATA2_02_M00348 TRANSFAC + 24743691 24743700 5.0E-06 GGAGATAAGA 10
V_EVI1_04_M00081 TRANSFAC - 24741103 24741117 8.0E-06 GAAAATGACAGGAAA 15
V_NKX29_01_M01352 TRANSFAC - 24743168 24743184 2.0E-06 TTCTAAGCACTTTACAT 17
V_NKX29_01_M01352 TRANSFAC + 24743169 24743185 3.0E-06 TGTAAAGTGCTTAGAAT 17
V_GM397_03_M02760 TRANSFAC - 24742907 24742923 4.0E-06 TGTGTGTGCACATCCCT 17
V_GM397_03_M02760 TRANSFAC + 24742908 24742924 1.0E-06 GGGATGTGCACACACAC 17
V_ETS_B_M00340 TRANSFAC + 24743521 24743534 1.0E-06 GAGAGGAAGTGAGT 14
V_POU5F1_02_M02245 TRANSFAC - 24743546 24743560 8.0E-06 TTCTCTGATGCAGAT 15
V_SP1_Q6_01_M00931 TRANSFAC - 24740402 24740411 4.0E-06 GGGGCGGGGC 10
V_DR4_Q2_M00965 TRANSFAC + 24740201 24740217 9.0E-06 TGACCTGCAAAAACCCC 17
V_IRF2_Q6_M01882 TRANSFAC - 24741104 24741119 7.0E-06 GAGAAAATGACAGGAA 16
V_GLI1_Q2_M01042 TRANSFAC - 24743341 24743350 1.0E-05 GACCACCAAC 10
V_OCT1_01_M00135 TRANSFAC - 24742887 24742905 3.0E-06 CTATGTATGCAAAACTCCC 19
V_SP1_03_M02281 TRANSFAC + 24740668 24740677 7.0E-06 CCCCGCCCCC 10
V_AP4_Q6_02_M01860 TRANSFAC - 24740421 24740433 2.0E-06 ACAGCTGTGGGCG 13
V_PU1_Q4_M01172 TRANSFAC - 24743519 24743537 0.0E+00 GAGACTCACTTCCTCTCTT 19
V_TCFAP2E_04_M02926 TRANSFAC + 24743535 24743548 8.0E-06 CTCATGAAAAAATC 14
V_MYBL1_04_M02884 TRANSFAC - 24740962 24740976 9.0E-06 TTACCAACTGGCATG 15
V_LDSPOLYA_B_M00317 TRANSFAC - 24742910 24742925 6.0E-06 TGTGTGTGTGCACATC 16
V_CDP_04_M01344 TRANSFAC + 24743708 24743722 6.0E-06 AACTGATGATAATAA 15
V_LXRB_RXRA_Q5_M02021 TRANSFAC - 24741040 24741054 1.0E-06 TGAGGTCAGTGGAGT 15
V_ETS_Q4_M00771 TRANSFAC - 24743523 24743534 3.0E-06 ACTCACTTCCTC 12
V_GC_01_M00255 TRANSFAC - 24740400 24740413 1.0E-06 TAGGGGCGGGGCTA 14
V_GC_01_M00255 TRANSFAC - 24740415 24740428 9.0E-06 TGTGGGCGGAGCTA 14
V_CRX_Q4_M00623 TRANSFAC + 24743460 24743472 1.0E-06 TCACTAATCACAT 13
V_SPI1_03_M02078 TRANSFAC + 24743522 24743531 1.0E-06 AGAGGAAGTG 10
V_GFI1_01_M00250 TRANSFAC - 24742190 24742213 0.0E+00 GGGAAAAAAATCACAGTCTTTAAA 24
V_HIC1_03_M01073 TRANSFAC - 24740655 24740672 3.0E-06 CGGGGGTGCCCGGGAGCC 18
V_ZBP89_Q4_M01816 TRANSFAC - 24740951 24740960 6.0E-06 TCCTCCCCCC 10
V_SP1_Q6_M00196 TRANSFAC - 24740401 24740413 3.0E-06 TAGGGGCGGGGCT 13
V_SP1_Q6_M00196 TRANSFAC - 24740666 24740678 4.0E-06 GGGGGGCGGGGGT 13
V_EVI1_01_M00078 TRANSFAC - 24743294 24743309 5.0E-06 GGACCAGACTAGACAC 16
V_AP2BETA_Q3_M01858 TRANSFAC + 24740276 24740291 6.0E-06 GCGCGGGCCTGCGGAG 16
V_LXR_DR4_Q3_M00766 TRANSFAC + 24740201 24740216 8.0E-06 TGACCTGCAAAAACCC 16
V_TTF1_Q6_M00794 TRANSFAC + 24743419 24743430 8.0E-06 CCCTCAAGTGCA 12
V_MEF2_03_M00232 TRANSFAC - 24743161 24743182 1.0E-05 CTAAGCACTTTACATAGATTCT 22
V_MATH1_Q2_M01716 TRANSFAC + 24740900 24740909 9.0E-06 CCACCTGGTG 10
V_TATA_C_M00216 TRANSFAC - 24742188 24742197 3.0E-06 TCTTTAAAAG 10
V_CUX1_04_M02959 TRANSFAC + 24743708 24743722 6.0E-06 AACTGATGATAATAA 15
V_REST_01_M01256 TRANSFAC + 24740306 24740327 4.0E-06 TCAGGGTTCTCACCATGGTGCC 22
V_GATA1_09_M02254 TRANSFAC + 24743691 24743701 7.0E-06 GGAGATAAGAG 11
V_PBX1_05_M01967 TRANSFAC - 24740386 24740399 7.0E-06 CGTGATTGACACTT 14
V_KLF7_03_M02773 TRANSFAC + 24740399 24740414 7.0E-06 GTAGCCCCGCCCCTAC 16
V_OCT1_B_M00342 TRANSFAC - 24742891 24742900 6.0E-06 TATGCAAAAC 10
V_AP1_Q2_01_M00924 TRANSFAC - 24743498 24743509 5.0E-06 TGACTCAACCTT 12
V_NKX23_01_M01457 TRANSFAC + 24743169 24743184 3.0E-06 TGTAAAGTGCTTAGAA 16
V_NKX23_01_M01457 TRANSFAC - 24743169 24743184 4.0E-06 TTCTAAGCACTTTACA 16
V_ELK1_01_M00007 TRANSFAC - 24743360 24743375 9.0E-06 AGAGCAGGAAGCTAGA 16
V_ELK1_01_M00007 TRANSFAC + 24743519 24743534 1.0E-06 AAGAGAGGAAGTGAGT 16
V_BCL6B_04_M02844 TRANSFAC + 24740401 24740416 1.0E-06 AGCCCCGCCCCTACTA 16
V_BCL6B_04_M02844 TRANSFAC + 24741218 24741233 5.0E-06 ACCTCCACCCCTAAAT 16
V_SP4_Q5_M01273 TRANSFAC + 24740402 24740412 8.0E-06 GCCCCGCCCCT 11
V_SP4_Q5_M01273 TRANSFAC + 24740667 24740677 5.0E-06 CCCCCGCCCCC 11
V_PTF1BETA_Q6_M00657 TRANSFAC - 24741106 24741119 0.0E+00 GAGAAAATGACAGG 14
V_GFI1_Q6_M01067 TRANSFAC - 24742196 24742208 9.0E-06 AAAAATCACAGTC 13
V_ATF1_Q6_M00691 TRANSFAC - 24743617 24743627 6.0E-06 CCTTCACGTCA 11
V_CIZ_01_M00734 TRANSFAC + 24743540 24743548 2.0E-06 GAAAAAATC 9
V_TTF1_Q5_M02034 TRANSFAC - 24743418 24743431 7.0E-06 CTGCACTTGAGGGC 14
V_GABPBETA_Q3_M01876 TRANSFAC + 24743522 24743532 2.0E-06 AGAGGAAGTGA 11
V_SIRT6_01_M01797 TRANSFAC + 24743693 24743700 7.0E-06 AGATAAGA 8
V_NKX3A_02_M01383 TRANSFAC - 24743168 24743184 2.0E-06 TTCTAAGCACTTTACAT 17
V_NKX3A_02_M01383 TRANSFAC + 24743169 24743185 1.0E-06 TGTAAAGTGCTTAGAAT 17
V_GATA3_02_M00350 TRANSFAC + 24743691 24743700 5.0E-06 GGAGATAAGA 10
V_ZFP206_01_M01742 TRANSFAC - 24740846 24740856 9.0E-06 CGCGCACGCGC 11
V_BDP1_01_M01796 TRANSFAC - 24740334 24740345 9.0E-06 TGTCTTGAACCC 12
V_FPM315_01_M01587 TRANSFAC + 24740952 24740963 7.0E-06 GGGGGAGGACCA 12
V_NRSF_01_M00256 TRANSFAC - 24740310 24740330 1.0E-06 GCCGGCACCATGGTGAGAACC 21
V_VDR_Q6_M00961 TRANSFAC - 24740233 24740244 3.0E-06 CCGTATGAACCT 12
V_SPIC_02_M02077 TRANSFAC + 24742136 24742145 7.0E-06 CGAGGAAGTT 10
V_SPIC_02_M02077 TRANSFAC + 24743522 24743531 3.0E-06 AGAGGAAGTG 10
V_REST_02_M02256 TRANSFAC - 24740310 24740330 1.0E-06 GCCGGCACCATGGTGAGAACC 21
V_ETS1_B_M00339 TRANSFAC + 24743522 24743536 7.0E-06 AGAGGAAGTGAGTCT 15
V_MEF3_B_M00319 TRANSFAC + 24740328 24740340 6.0E-06 GGCTCAGGGTTCA 13
V_EFC_Q6_M00626 TRANSFAC + 24743398 24743411 2.0E-06 AGATACTTGGGAAC 14
V_HOXD8_01_M01432 TRANSFAC - 24742848 24742864 7.0E-06 GAACCAATAAATGGCTT 17
V_SOX2_Q6_M01272 TRANSFAC + 24743465 24743480 5.0E-06 AATCACATTGTGATTA 16
V_SP1_Q2_01_M00933 TRANSFAC + 24740403 24740412 7.0E-06 CCCCGCCCCT 10
V_SP1_Q2_01_M00933 TRANSFAC + 24740668 24740677 4.0E-06 CCCCGCCCCC 10
V_MAFK_04_M02880 TRANSFAC + 24743541 24743555 9.0E-06 AAAAAATCTGCATCA 15
V_GATA6_04_M02757 TRANSFAC + 24743688 24743704 6.0E-06 TTTGGAGATAAGAGCAG 17
V_SP1_Q4_01_M00932 TRANSFAC - 24740401 24740413 5.0E-06 TAGGGGCGGGGCT 13
V_GFI1_Q6_01_M02010 TRANSFAC + 24742198 24742207 2.0E-06 CTGTGATTTT 10
V_OBOX5_01_M01381 TRANSFAC + 24743235 24743251 4.0E-06 CAGAAAGATTAAGTAAC 17
V_OBOX3_02_M03065 TRANSFAC + 24743234 24743250 1.0E-05 TCAGAAAGATTAAGTAA 17
V_ZID_01_M00085 TRANSFAC - 24742969 24742981 3.0E-06 TGGCTCCAGGATC 13
V_OBOX6_06_M03067 TRANSFAC - 24743235 24743251 4.0E-06 GTTACTTAATCTTTCTG 17
V_OBOX3_01_M01466 TRANSFAC + 24743234 24743250 1.0E-05 TCAGAAAGATTAAGTAA 17
V_AR_Q2_M00447 TRANSFAC + 24743183 24743197 9.0E-06 AATAGTGTCTGTACT 15
V_SPIB_03_M02076 TRANSFAC + 24742136 24742145 7.0E-06 CGAGGAAGTT 10
V_SPIB_03_M02076 TRANSFAC + 24743522 24743531 3.0E-06 AGAGGAAGTG 10
V_T3RALPHA_Q6_M01724 TRANSFAC - 24741046 24741056 8.0E-06 GGTGAGGTCAG 11
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL