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PTPN9 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5780 protein tyrosine phosphatase, non-receptor type 9 chr15 - 75871125 - 75876625 75871625 Transcription Factor Binding Sites   Download all TFBS in the PTPN9 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 75870095 75870107 5.0E-06 ATAAACATGAAAA 13 Egr1_MA0162.1 JASPAR + 75876597 75876607 7.0E-06 TGTGTGGGCGT 11 HINFP1_C2H2_full_dimeric_19_1 SELEX + 75871714 75871732 3.0E-06 GCGGCCGCCCCGCGGCCGC 19 HINFP1_C2H2_full_dimeric_19_1 SELEX - 75871714 75871732 2.0E-06 GCGGCCGCGGGGCGGCCGC 19 SPIC_ETS_full_monomeric_14_1 SELEX - 75869702 75869715 3.0E-06 AGAATTGGGAAGTA 14 SPIC_ETS_full_monomeric_14_1 SELEX + 75871932 75871945 1.0E-06 AGAAAAAGGAAGAA 14 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 75870091 75870107 8.0E-06 ATAAACATGAAAAAAGA 17 Mafb_bZIP_DBD_monomeric_12_1 SELEX + 75872006 75872017 4.0E-06 TATCTGCTGACT 12 HINFP1_C2H2_full_monomeric_12_1 SELEX - 75871585 75871596 2.0E-06 CAGCGTCCGCGA 12 EWSR1-FLI1_MA0149.1 JASPAR + 75871931 75871948 9.0E-06 GAGAAAAAGGAAGAAAAG 18 GLI2_C2H2_DBD_monomeric_14_1 SELEX - 75876592 75876605 9.0E-06 GCCCACACACACAG 14 SOX9_HMG_DBD_monomeric_9_1 SELEX + 75870367 75870375 4.0E-06 GAACAATAG 9 NFYA_MA0060.1 JASPAR + 75869969 75869984 6.0E-06 ATTAGCCAATAATAGT 16 Pax4_MA0068.1 JASPAR - 75870090 75870119 7.0E-06 AAAAAAATAAAAATAAACATGAAAAAAGAA 30 Pax4_MA0068.1 JASPAR - 75871321 75871350 5.0E-06 GAATAATATAAAAAAGGATTTCCTCCCGGA 30 NR2F1_MA0017.1 JASPAR + 75870771 75870784 1.0E-06 GGAACTTTGCCCCT 14 SPIB_ETS_DBD_monomeric_14_1 SELEX + 75871440 75871453 5.0E-06 GAAATCAGGAACTT 14 MEF2B_MADS_full_dimeric_12_1 SELEX + 75869973 75869984 1.0E-05 GCCAATAATAGT 12 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX - 75876594 75876609 9.0E-06 ACACGCCCACACACAC 16 Foxq1_MA0040.1 JASPAR + 75870098 75870108 7.0E-06 TCATGTTTATT 11 EGR2_C2H2_full_monomeric_15_1 SELEX - 75876595 75876609 7.0E-06 ACACGCCCACACACA 15 SP1_MA0079.2 JASPAR - 75871850 75871859 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR - 75871867 75871876 3.0E-06 CCCCTCCCCC 10 FOXI1_MA0042.1 JASPAR + 75870098 75870109 0.0E+00 TCATGTTTATTT 12 NRL_bZIP_DBD_monomeric_11_1 SELEX + 75872006 75872016 3.0E-06 TATCTGCTGAC 11 EGR4_C2H2_DBD_monomeric_16_2 SELEX - 75876594 75876609 3.0E-06 ACACGCCCACACACAC 16 Evi1_MA0029.1 JASPAR + 75869928 75869941 8.0E-06 GAGAAAAGACAAGG 14 HNF4A_MA0114.1 JASPAR - 75870771 75870783 6.0E-06 GGGGCAAAGTTCC 13 NR3C1_MA0113.1 JASPAR + 75871943 75871960 8.0E-06 GAAAAGAGTATTTCGTGA 18 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 75871356 75871366 7.0E-06 GTTCCTCACAC 11 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 75870771 75870784 5.0E-06 AGGGGCAAAGTTCC 14 SOX9_MA0077.1 JASPAR + 75870367 75870375 9.0E-06 GAACAATAG 9 SPI1_ETS_full_monomeric_14_1 SELEX + 75871440 75871453 7.0E-06 GAAATCAGGAACTT 14 ETV6_ETS_full_dimeric_15_1 SELEX - 75871276 75871290 9.0E-06 AAGGAAGCAGAAGCG 15 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 75869967 75869980 9.0E-06 CCATTAGCCAATAA 14 ELF5_MA0136.1 JASPAR - 75871430 75871438 2.0E-06 TATTTCCTT 9 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 75870095 75870107 6.0E-06 ATAAACATGAAAA 13 RREB1_MA0073.1 JASPAR - 75876595 75876614 8.0E-06 CACCCACACGCCCACACACA 20 Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 75870094 75870105 6.0E-06 AAACATGAAAAA 12 V_FOXP1_01_M00987 TRANSFAC + 75870094 75870113 0.0E+00 TTTTTCATGTTTATTTTTAT 20 V_FOXP1_01_M00987 TRANSFAC + 75870098 75870117 0.0E+00 TCATGTTTATTTTTATTTTT 20 V_HNF3B_01_M00131 TRANSFAC + 75870096 75870110 0.0E+00 TTTCATGTTTATTTT 15 V_E2A_Q6_01_M02088 TRANSFAC + 75869733 75869745 5.0E-06 GGCCACCTGCTTG 13 V_FREAC7_01_M00293 TRANSFAC - 75870097 75870112 0.0E+00 TAAAAATAAACATGAA 16 V_ATF5_01_M01295 TRANSFAC - 75871936 75871946 3.0E-06 TTTCTTCCTTT 11 V_MAFK_03_M02776 TRANSFAC + 75872004 75872018 8.0E-06 ATTATCTGCTGACTG 15 V_FOXA2_04_M02749 TRANSFAC - 75870096 75870112 5.0E-06 TAAAAATAAACATGAAA 17 V_NFY_Q6_M00185 TRANSFAC + 75869971 75869981 9.0E-06 TAGCCAATAAT 11 V_SOX30_03_M02804 TRANSFAC + 75870364 75870379 1.0E-06 AAGGAACAATAGAGCT 16 V_EVI1_04_M00081 TRANSFAC + 75871422 75871436 7.0E-06 GGATTTAAAAGGAAA 15 V_FOXD3_01_M00130 TRANSFAC + 75870098 75870109 9.0E-06 TCATGTTTATTT 12 V_BCL6_01_M01183 TRANSFAC + 75870095 75870110 3.0E-06 TTTTCATGTTTATTTT 16 V_BCL6_01_M01183 TRANSFAC + 75870096 75870111 1.0E-06 TTTCATGTTTATTTTT 16 V_ETS_B_M00340 TRANSFAC + 75871324 75871337 5.0E-06 GGGAGGAAATCCTT 14 V_ZFP740_04_M02938 TRANSFAC - 75871318 75871334 1.0E-05 GATTTCCTCCCGGAAGA 17 V_FOXJ2_02_M00423 TRANSFAC + 75869974 75869987 2.0E-06 CCAATAATAGTTTG 14 V_MEF2_02_M00231 TRANSFAC + 75869967 75869988 9.0E-06 CCATTAGCCAATAATAGTTTGT 22 V_IRF_Q6_01_M00972 TRANSFAC - 75870088 75870098 6.0E-06 AAAAAAGAAAA 11 V_POU2F3_01_M01476 TRANSFAC + 75871994 75872009 7.0E-06 TCGTTTGCAAATTATC 16 V_HNF3_Q6_01_M01012 TRANSFAC + 75870096 75870113 2.0E-06 TTTCATGTTTATTTTTAT 18 V_GABPA_04_M02858 TRANSFAC - 75871925 75871940 7.0E-06 CCTTTTTCTCCCTCCC 16 V_FOXJ1_03_M02750 TRANSFAC - 75870095 75870110 8.0E-06 AAAATAAACATGAAAA 16 V_SP1_03_M02281 TRANSFAC - 75871850 75871859 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC - 75871867 75871876 3.0E-06 CCCCTCCCCC 10 V_HNF4A_03_M02220 TRANSFAC - 75870771 75870783 6.0E-06 GGGGCAAAGTTCC 13 V_HFH4_01_M00742 TRANSFAC + 75869979 75869991 7.0E-06 AATAGTTTGTAAA 13 V_EGR1_02_M01972 TRANSFAC + 75876597 75876607 4.0E-06 TGTGTGGGCGT 11 V_PPAR_DR1_Q2_M00763 TRANSFAC + 75870771 75870783 9.0E-06 GGAACTTTGCCCC 13 V_PU1_Q4_M01172 TRANSFAC - 75871426 75871444 6.0E-06 ATTTCCTATTTCCTTTTAA 19 V_PU1_Q4_M01172 TRANSFAC - 75871933 75871951 0.0E+00 ACTCTTTTCTTCCTTTTTC 19 V_PU1_Q4_M01172 TRANSFAC - 75871936 75871954 5.0E-06 AATACTCTTTTCTTCCTTT 19 V_NFY_Q6_01_M00775 TRANSFAC + 75869968 75869980 5.0E-06 CATTAGCCAATAA 13 V_NR3C1_01_M02219 TRANSFAC + 75871943 75871960 8.0E-06 GAAAAGAGTATTTCGTGA 18 V_TCFAP2E_04_M02926 TRANSFAC - 75870091 75870104 0.0E+00 AACATGAAAAAAGA 14 V_SOX7_03_M02807 TRANSFAC + 75870361 75870382 0.0E+00 TTTAAGGAACAATAGAGCTCAA 22 V_HELIOSA_02_M01004 TRANSFAC + 75870362 75870372 8.0E-06 TTAAGGAACAA 11 V_ZFP105_03_M02827 TRANSFAC - 75870097 75870111 3.0E-06 AAAAATAAACATGAA 15 V_COUP_01_M00158 TRANSFAC + 75870771 75870784 1.0E-06 GGAACTTTGCCCCT 14 V_NGFIC_01_M00244 TRANSFAC - 75872048 75872059 8.0E-06 ACGCGTAGGTGG 12 V_SOX7_04_M02911 TRANSFAC + 75871998 75872019 3.0E-06 TTGCAAATTATCTGCTGACTGG 22 V_IRX4_01_M01410 TRANSFAC - 75870092 75870108 2.0E-06 AATAAACATGAAAAAAG 17 V_HOXA3_07_M02869 TRANSFAC - 75869975 75869988 3.0E-06 ACAAACTATTATTG 14 V_IRF_Q6_M00772 TRANSFAC + 75870084 75870098 6.0E-06 GCCTTTTTCTTTTTT 15 V_HNF1_Q6_01_M01011 TRANSFAC - 75870098 75870118 0.0E+00 AAAAAATAAAAATAAACATGA 21 V_BCL6_Q3_M01171 TRANSFAC + 75876284 75876293 5.0E-06 GGTTCTAGGA 10 V_SOX18_03_M02801 TRANSFAC - 75870362 75870377 1.0E-05 CTCTATTGTTCCTTAA 16 V_TATA_C_M00216 TRANSFAC + 75869942 75869951 6.0E-06 ACTTTAAAAA 10 V_ELF5_01_M01197 TRANSFAC + 75871428 75871438 0.0E+00 AAAAGGAAATA 11 V_NFE4_Q5_M02105 TRANSFAC - 75871662 75871673 3.0E-06 CTCCCTCTCCAC 12 V_OCT1_04_M00138 TRANSFAC - 75870087 75870109 0.0E+00 AAATAAACATGAAAAAAGAAAAA 23 V_OCT1_04_M00138 TRANSFAC + 75870098 75870120 1.0E-06 TCATGTTTATTTTTATTTTTTTT 23 V_SPIB_01_M01204 TRANSFAC - 75869699 75869715 5.0E-06 AGAATTGGGAAGTACTT 17 V_SPIB_01_M01204 TRANSFAC + 75871440 75871456 0.0E+00 GAAATCAGGAACTTTTA 17 V_ERALPHA_01_M01801 TRANSFAC - 75870376 75870390 8.0E-06 AGCTTACATTGAGCT 15 V_TCF7_03_M02817 TRANSFAC - 75870090 75870106 7.0E-06 TAAACATGAAAAAAGAA 17 V_XFD2_01_M00268 TRANSFAC - 75870097 75870110 0.0E+00 AAAATAAACATGAA 14 V_HFH1_01_M00129 TRANSFAC + 75870098 75870109 1.0E-06 TCATGTTTATTT 12 V_HNF4A_Q6_01_M02016 TRANSFAC - 75870768 75870782 9.0E-06 GGGCAAAGTTCCTTG 15 V_HNF4_DR1_Q3_M00764 TRANSFAC + 75870771 75870783 8.0E-06 GGAACTTTGCCCC 13 V_GATA5_04_M02860 TRANSFAC + 75876532 75876548 5.0E-06 AATAAAGATATTTAACT 17 V_TBP_06_M02814 TRANSFAC + 75871333 75871348 9.0E-06 TCCTTTTTTATATTAT 16 V_TBP_06_M02814 TRANSFAC - 75871333 75871348 9.0E-06 ATAATATAAAAAAGGA 16 V_TBP_06_M02814 TRANSFAC + 75871335 75871350 1.0E-06 CTTTTTTATATTATTC 16 V_TBP_06_M02814 TRANSFAC - 75871335 75871350 1.0E-05 GAATAATATAAAAAAG 16 V_EGR2_01_M00246 TRANSFAC + 75876596 75876607 9.0E-06 GTGTGTGGGCGT 12 V_SOX9_B1_M00410 TRANSFAC + 75870364 75870377 5.0E-06 AAGGAACAATAGAG 14 V_IRX5_01_M01472 TRANSFAC - 75870092 75870108 6.0E-06 AATAAACATGAAAAAAG 17 V_IRX5_01_M01472 TRANSFAC + 75870093 75870109 6.0E-06 TTTTTTCATGTTTATTT 17 V_GATA4_Q3_M00632 TRANSFAC - 75871367 75871378 6.0E-06 AGATAAGGGGGA 12 V_FREAC2_01_M00290 TRANSFAC - 75870097 75870112 2.0E-06 TAAAAATAAACATGAA 16 V_ELF1_Q6_M00746 TRANSFAC + 75871433 75871444 2.0E-06 GAAATAGGAAAT 12 V_ZFP105_04_M02931 TRANSFAC - 75876534 75876550 6.0E-06 TCAGTTAAATATCTTTA 17 V_IRX3_02_M01485 TRANSFAC - 75870092 75870108 8.0E-06 AATAAACATGAAAAAAG 17 V_CAAT_01_M00254 TRANSFAC + 75869969 75869980 1.0E-06 ATTAGCCAATAA 12 V_SOX15_03_M02799 TRANSFAC + 75870363 75870379 1.0E-06 TAAGGAACAATAGAGCT 17 V_MTF1_06_M02882 TRANSFAC - 75870092 75870105 1.0E-06 AAACATGAAAAAAG 14 V_MTF1_06_M02882 TRANSFAC + 75871287 75871300 9.0E-06 CCTTAAGAAAAATC 14 V_MTF1_06_M02882 TRANSFAC - 75871334 75871347 3.0E-06 TAATATAAAAAAGG 14 V_MTF1_06_M02882 TRANSFAC - 75871337 75871350 9.0E-06 GAATAATATAAAAA 14 V_TAL1_01_M01591 TRANSFAC + 75871368 75871380 6.0E-06 CCCCCTTATCTCC 13 V_MYOD_Q6_01_M00929 TRANSFAC - 75869730 75869747 6.0E-06 TGCAAGCAGGTGGCCAAG 18 V_TCFE2A_03_M02823 TRANSFAC + 75869859 75869875 4.0E-06 ATCACCAGGTGTCAAAA 17 V_FOXL1_04_M02753 TRANSFAC - 75870096 75870112 2.0E-06 TAAAAATAAACATGAAA 17 V_NKX3A_02_M01383 TRANSFAC - 75869694 75869710 7.0E-06 TGGGAAGTACTTCAGTA 17 V_MYOGNF1_01_M00056 TRANSFAC + 75870053 75870081 7.0E-06 TAGAGCTTGAAATGGGTTGCCAGCATGGT 29 V_NFY_01_M00287 TRANSFAC + 75869969 75869984 5.0E-06 ATTAGCCAATAATAGT 16 V_FPM315_01_M01587 TRANSFAC + 75871974 75871985 3.0E-06 GGAGGAGGAGGA 12 V_MTATA_B_M00320 TRANSFAC - 75871417 75871433 3.0E-06 CCTTTTAAATCCCGAGT 17 V_STAT6_02_M00500 TRANSFAC - 75871327 75871334 1.0E-05 GATTTCCT 8 V_STAT6_02_M00500 TRANSFAC - 75871438 75871445 1.0E-05 GATTTCCT 8 V_ZFP281_01_M01597 TRANSFAC + 75871849 75871859 7.0E-06 CGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 75871866 75871876 3.0E-06 AGGGGGAGGGG 11 V_SRF_Q5_01_M00922 TRANSFAC + 75869919 75869933 3.0E-06 ACAAATAAGGAGAAA 15 V_SRF_Q4_M00810 TRANSFAC + 75869918 75869935 7.0E-06 CACAAATAAGGAGAAAAG 18 V_SOX21_04_M02907 TRANSFAC - 75870362 75870378 0.0E+00 GCTCTATTGTTCCTTAA 17 V_IRX2_01_M01405 TRANSFAC + 75870093 75870109 7.0E-06 TTTTTTCATGTTTATTT 17 V_IRF1_Q6_01_M01881 TRANSFAC + 75870086 75870099 8.0E-06 CTTTTTCTTTTTTC 14 V_SOX8_03_M02808 TRANSFAC - 75870363 75870379 1.0E-06 AGCTCTATTGTTCCTTA 17 V_ZFP281_04_M02831 TRANSFAC - 75871864 75871878 4.0E-06 GTCCCCTCCCCCTCC 15 V_HFH3_01_M00289 TRANSFAC + 75870098 75870110 1.0E-06 TCATGTTTATTTT 13 V_EWSR1FLI1_01_M02252 TRANSFAC + 75871931 75871948 9.0E-06 GAGAAAAAGGAAGAAAAG 18 V_FOXJ2_01_M00422 TRANSFAC - 75870096 75870113 0.0E+00 ATAAAAATAAACATGAAA 18 V_EFC_Q6_M00626 TRANSFAC - 75871997 75872010 4.0E-06 AGATAATTTGCAAA 14 V_HOXD8_01_M01432 TRANSFAC - 75869971 75869987 2.0E-06 CAAACTATTATTGGCTA 17 V_PIT1_Q6_M00802 TRANSFAC + 75870095 75870112 1.0E-06 TTTTCATGTTTATTTTTA 18 V_SRY_05_M02917 TRANSFAC + 75870362 75870378 1.0E-06 TTAAGGAACAATAGAGC 17 V_CTF1_01_M01196 TRANSFAC + 75869886 75869899 6.0E-06 TGGCCTGAGGCCAA 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 75871847 75871860 0.0E+00 GGCGGGGGAGGGGA 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 75871864 75871877 2.0E-06 GGAGGGGGAGGGGA 14 V_ELF5_04_M02241 TRANSFAC - 75871430 75871438 2.0E-06 TATTTCCTT 9 V_HNF4_01_M00134 TRANSFAC - 75870768 75870786 6.0E-06 CCAGGGGCAAAGTTCCTTG 19 V_IRXB3_01_M01377 TRANSFAC - 75870092 75870108 9.0E-06 AATAAACATGAAAAAAG 17 V_IRXB3_01_M01377 TRANSFAC + 75870093 75870109 9.0E-06 TTTTTTCATGTTTATTT 17 TLX1_NFIC_MA0119.1 JASPAR + 75869886 75869899 6.0E-06 TGGCCTGAGGCCAA 14 V_COUP_DR1_Q6_M00765 TRANSFAC + 75870771 75870783 7.0E-06 GGAACTTTGCCCC 13 V_GLIS2_04_M02863 TRANSFAC - 75871336 75871349 1.0E-06 AATAATATAAAAAA 14 V_FOXK1_03_M02752 TRANSFAC - 75870096 75870112 6.0E-06 TAAAAATAAACATGAAA 17 V_SMAD1_01_M01590 TRANSFAC + 75869925 75869936 1.0E-05 AAGGAGAAAAGA 12 V_RORA2_01_M00157 TRANSFAC + 75869949 75869961 8.0E-06 AAAATCAGGTCAA 13 V_SPI1_02_M02043 TRANSFAC + 75871429 75871438 8.0E-06 AAAGGAAATA 10 V_NANOG_02_M01247 TRANSFAC - 75870082 75870101 8.0E-06 ATGAAAAAAGAAAAAGGCAA 20 V_NANOG_02_M01247 TRANSFAC - 75870087 75870106 4.0E-06 TAAACATGAAAAAAGAAAAA 20 V_NANOG_02_M01247 TRANSFAC + 75870361 75870380 1.0E-06 TTTAAGGAACAATAGAGCTC 20 V_OCT4_01_M01125 TRANSFAC + 75870093 75870107 6.0E-06 TTTTTTCATGTTTAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.