Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ANKRA2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 57763 ankyrin repeat, family A (RFXANK-like), 2 chr5 - 72861011 - 72866511 72861511 Transcription Factor Binding Sites   Download all TFBS in the ANKRA2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 72861359 72861371 3.0E-06 AAAAACAAAAATA 13 POU2F1_POU_DBD_dimeric_14_1 SELEX - 72861353 72861366 5.0E-06 CAAAAATATTAAAA 14 HOXC13_homeodomain_DBD_monomeric_11_1 SELEX - 72860641 72860651 7.0E-06 TCTCGTTAAAC 11 ZBTB7A_C2H2_DBD_monomeric_12_1 SELEX + 72861157 72861168 1.0E-06 CGCGACCACCGA 12 ETV3_ETS_DBD_monomeric_10_1 SELEX - 72861255 72861264 8.0E-06 ATCGGAAGTG 10 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 72861322 72861338 5.0E-06 ACAAAAAAAAGAAAACC 17 ZBTB7B_C2H2_full_monomeric_12_1 SELEX + 72861158 72861169 1.0E-06 GCGACCACCGAC 12 Tp53_p53l_DBD_dimeric_18_2 SELEX + 72861224 72861241 6.0E-06 TCCAAGCCCGGGCTTGTT 18 HOXD13_homeodomain_DBD_monomeric_11_1 SELEX - 72860641 72860651 9.0E-06 TCTCGTTAAAC 11 RARG_nuclearreceptor_full_dimeric_17_1 SELEX + 72861419 72861435 3.0E-06 AGGGTCATTTCAGTTGA 17 BARX1_homeodomain_DBD_monomeric_8_1 SELEX - 72861685 72861692 5.0E-06 ACAATTAA 8 SPIB_ETS_DBD_monomeric_14_1 SELEX - 72861255 72861268 4.0E-06 AGAAATCGGAAGTG 14 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX + 72861419 72861435 9.0E-06 AGGGTCATTTCAGTTGA 17 SP4_C2H2_full_monomeric_17_1 SELEX + 72861501 72861517 8.0E-06 ATCGCCCCGCCCACCTG 17 SP1_C2H2_DBD_monomeric_11_1 SELEX + 72861504 72861514 1.0E-05 GCCCCGCCCAC 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 72861361 72861371 8.0E-06 AAAAACAAAAA 11 ERF_ETS_DBD_monomeric_10_1 SELEX - 72861255 72861264 6.0E-06 ATCGGAAGTG 10 ZBTB7C_C2H2_full_monomeric_12_1 SELEX + 72861158 72861169 0.0E+00 GCGACCACCGAC 12 HOXB13_homeodomain_DBD_monomeric_11_1 SELEX - 72860641 72860651 9.0E-06 TCTCGTTAAAC 11 HOXA13_homeodomain_full_monomeric_11_1 SELEX - 72860641 72860651 8.0E-06 TCTCGTTAAAC 11 SPI1_ETS_full_monomeric_14_1 SELEX - 72861255 72861268 7.0E-06 AGAAATCGGAAGTG 14 TP53_MA0106.1 JASPAR - 72861225 72861244 2.0E-06 CAAAACAAGCCCGGGCTTGG 20 POU3F3_POU_DBD_dimeric_12_1 SELEX - 72861354 72861365 3.0E-06 AAAAATATTAAA 12 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 72861359 72861371 0.0E+00 AAAAACAAAAATA 13 E2F2_E2F_DBD_dimeric_18_1 SELEX - 72861366 72861383 6.0E-06 CGTAAAGGCGGCAAAAAC 18 IRF2_MA0051.1 JASPAR + 72860612 72860629 2.0E-06 GGAAAATGAACGCTTATC 18 V_FOXP1_01_M00987 TRANSFAC + 72861350 72861369 2.0E-06 TTTTTTTAATATTTTTGTTT 20 V_FOXP1_01_M00987 TRANSFAC + 72861352 72861371 0.0E+00 TTTTTAATATTTTTGTTTTT 20 RXR_RAR_DR5_MA0159.1 JASPAR + 72860640 72860656 6.0E-06 AGTTTAACGAGAGGAGA 17 V_HNF3B_01_M00131 TRANSFAC + 72861354 72861368 2.0E-06 TTTAATATTTTTGTT 15 V_DBX1_01_M01483 TRANSFAC - 72861348 72861364 1.0E-05 AAAATATTAAAAAAAAG 17 V_DBX1_01_M01483 TRANSFAC - 72861349 72861365 1.0E-06 AAAAATATTAAAAAAAA 17 V_TCF3_01_M01594 TRANSFAC + 72861323 72861335 5.0E-06 GTTTTCTTTTTTT 13 V_NRSF_Q4_M01028 TRANSFAC + 72861426 72861444 4.0E-06 TTTCAGTTGACGGTTCTGG 19 V_EVI1_04_M00081 TRANSFAC - 72861351 72861365 8.0E-06 AAAAATATTAAAAAA 15 V_BCL6_01_M01183 TRANSFAC + 72861316 72861331 8.0E-06 CTTTCGGGTTTTCTTT 16 V_BCL6_01_M01183 TRANSFAC + 72861348 72861363 7.0E-06 CTTTTTTTTAATATTT 16 V_BCL6_01_M01183 TRANSFAC + 72861349 72861364 0.0E+00 TTTTTTTTAATATTTT 16 V_BCL6_01_M01183 TRANSFAC + 72861350 72861365 1.0E-06 TTTTTTTAATATTTTT 16 V_ATF4_Q6_M01864 TRANSFAC + 72861567 72861575 6.0E-06 TACGTCATC 9 V_EBOX_Q6_01_M01034 TRANSFAC + 72861511 72861520 4.0E-06 CCACCTGACC 10 V_IRF_Q6_01_M00972 TRANSFAC - 72861324 72861334 6.0E-06 AAAAAAGAAAA 11 V_SRY_02_M00160 TRANSFAC - 72861360 72861371 5.0E-06 AAAAACAAAAAT 12 V_NFAT3_Q3_M01734 TRANSFAC - 72860611 72860620 1.0E-05 TCATTTTCCA 10 V_OTX_Q1_M01117 TRANSFAC + 72861683 72861690 5.0E-06 GATTAATT 8 V_HNF3_Q6_01_M01012 TRANSFAC + 72861354 72861371 8.0E-06 TTTAATATTTTTGTTTTT 18 V_GKLF_02_M01588 TRANSFAC + 72861504 72861515 8.0E-06 GCCCCGCCCACC 12 V_PU1_Q4_M01172 TRANSFAC + 72861256 72861274 2.0E-06 ACTTCCGATTTCTTCTTTC 19 V_NFAT2_01_M01748 TRANSFAC + 72860610 72860618 8.0E-06 GTGGAAAAT 9 V_TCFAP2E_04_M02926 TRANSFAC - 72861348 72861361 4.0E-06 ATATTAAAAAAAAG 14 V_TCFAP2E_04_M02926 TRANSFAC - 72861349 72861362 7.0E-06 AATATTAAAAAAAA 14 V_CDX_Q5_M00991 TRANSFAC - 72861354 72861371 2.0E-06 AAAAACAAAAATATTAAA 18 V_TAL1_GATA1_01_M02243 TRANSFAC - 72860624 72860641 3.0E-06 CTGCTGTGCCAAGATAAG 18 V_SOX13_03_M02797 TRANSFAC - 72861683 72861698 9.0E-06 CCAAGGACAATTAATC 16 V_SOX7_03_M02807 TRANSFAC - 72861354 72861375 5.0E-06 CGGCAAAAACAAAAATATTAAA 22 V_FOXA2_02_M02853 TRANSFAC - 72861351 72861365 6.0E-06 AAAAATATTAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 72861346 72861360 7.0E-06 TATTAAAAAAAAGGA 15 V_ZFP105_03_M02827 TRANSFAC - 72861349 72861363 7.0E-06 AAATATTAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 72861358 72861372 1.0E-06 CAAAAACAAAAATAT 15 V_ARID5A_03_M02736 TRANSFAC - 72861351 72861364 1.0E-06 AAAATATTAAAAAA 14 V_IRF5_04_M02873 TRANSFAC - 72861081 72861095 5.0E-06 ATGAGCGAGAGTTTC 15 V_NKX61_01_M00424 TRANSFAC + 72861352 72861364 3.0E-06 TTTTTAATATTTT 13 V_AMEF2_Q6_M00403 TRANSFAC + 72861280 72861297 2.0E-06 CTGGCTAAAAAACGTTCC 18 V_SP1_Q6_M00196 TRANSFAC - 72861503 72861515 5.0E-06 GGTGGGCGGGGCG 13 V_HNF3_Q6_M00791 TRANSFAC - 72861359 72861371 4.0E-06 AAAAACAAAAATA 13 V_NKX25_02_M00241 TRANSFAC - 72861874 72861881 7.0E-06 CTTAATTG 8 V_HNF1_Q6_01_M01011 TRANSFAC - 72861350 72861370 6.0E-06 AAAACAAAAATATTAAAAAAA 21 Tal1_Gata1_MA0140.1 JASPAR - 72860624 72860641 3.0E-06 CTGCTGTGCCAAGATAAG 18 V_DAX1_01_M01248 TRANSFAC + 72861143 72861162 9.0E-06 AGAGTGCAAGGTCTCGCGAC 20 V_NCX_02_M01420 TRANSFAC - 72861349 72861365 3.0E-06 AAAAATATTAAAAAAAA 17 V_TBP_06_M02814 TRANSFAC + 72861348 72861363 7.0E-06 CTTTTTTTTAATATTT 16 V_TBP_06_M02814 TRANSFAC + 72861349 72861364 4.0E-06 TTTTTTTTAATATTTT 16 V_FOXO1_Q5_M01216 TRANSFAC - 72861363 72861371 1.0E-06 AAAAACAAA 9 V_SP4_Q5_M01273 TRANSFAC + 72861504 72861514 9.0E-06 GCCCCGCCCAC 11 V_HBP1_04_M02866 TRANSFAC - 72860069 72860085 1.0E-06 AGTTCACATTGTCCAGT 17 V_ZFP105_04_M02931 TRANSFAC - 72861844 72861860 5.0E-06 CCGGTTAAAGAATTTGG 17 V_MTF1_06_M02882 TRANSFAC - 72861347 72861360 9.0E-06 TATTAAAAAAAAGG 14 V_MTF1_06_M02882 TRANSFAC - 72861348 72861361 1.0E-06 ATATTAAAAAAAAG 14 V_MTF1_06_M02882 TRANSFAC - 72861350 72861363 0.0E+00 AAATATTAAAAAAA 14 V_LUN1_01_M00480 TRANSFAC + 72861821 72861837 6.0E-06 TCCCAGGCTATATAGGA 17 V_AIRE_01_M00999 TRANSFAC + 72860546 72860571 5.0E-06 TTTATAGATGGAATTACAGGTCTTCG 26 V_TCF7_04_M02921 TRANSFAC - 72861349 72861363 5.0E-06 AAATATTAAAAAAAA 15 V_DMRT7_01_M01151 TRANSFAC + 72861353 72861366 9.0E-06 TTTTAATATTTTTG 14 V_R_01_M00273 TRANSFAC + 72861689 72861709 0.0E+00 TTGTCCTTGGGTCGAGGTGTC 21 V_RXR_RAR_01_M02272 TRANSFAC + 72860640 72860656 6.0E-06 AGTTTAACGAGAGGAGA 17 V_SRF_06_M02916 TRANSFAC - 72861325 72861341 9.0E-06 GGGACAAAAAAAAGAAA 17 V_SRF_06_M02916 TRANSFAC - 72861345 72861361 5.0E-06 ATATTAAAAAAAAGGAG 17 V_SRF_06_M02916 TRANSFAC - 72861356 72861372 1.0E-05 CAAAAACAAAAATATTA 17 V_SRF_06_M02916 TRANSFAC - 72861357 72861373 7.0E-06 GCAAAAACAAAAATATT 17 V_SRF_06_M02916 TRANSFAC - 72861358 72861374 9.0E-06 GGCAAAAACAAAAATAT 17 V_SATB1_01_M01232 TRANSFAC - 72861349 72861360 9.0E-06 TATTAAAAAAAA 12 V_FOXO1_01_M00473 TRANSFAC - 72861363 72861372 4.0E-06 CAAAAACAAA 10 V_SOX2_Q6_M01272 TRANSFAC + 72861357 72861372 1.0E-06 AATATTTTTGTTTTTG 16 V_PPARG_02_M00515 TRANSFAC + 72861855 72861877 2.0E-06 AACCGGCTCAAGTTCCCCTCAAT 23 V_IRF1_01_M00062 TRANSFAC - 72861360 72861372 6.0E-06 CAAAAACAAAAAT 13 V_SP1_Q4_01_M00932 TRANSFAC - 72861503 72861515 5.0E-06 GGTGGGCGGGGCG 13 V_TAACC_B_M00331 TRANSFAC - 72861315 72861337 9.0E-06 CAAAAAAAAGAAAACCCGAAAGT 23 V_ELK1_03_M01163 TRANSFAC - 72861255 72861265 1.0E-05 AATCGGAAGTG 11 V_GLIS2_04_M02863 TRANSFAC - 72861349 72861362 0.0E+00 AATATTAAAAAAAA 14 V_GLIS2_04_M02863 TRANSFAC - 72861352 72861365 7.0E-06 AAAAATATTAAAAA 14 V_SMAD1_01_M01590 TRANSFAC - 72861360 72861371 7.0E-06 AAAAACAAAAAT 12

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.