Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GBA3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 57733 glucosidase, beta, acid 3 chr4 + 22689547 - 22695047 22694547 Transcription Factor Binding Sites   Download all TFBS in the GBA3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 22692559 22692576 4.0E-06 AAAATAAATATCGAAATG 18 CTCF_MA0139.1 JASPAR - 22692530 22692548 9.0E-06 AGAACGCTAGATGGCAGTA 19 Sox1_HMG_DBD_dimeric_14_1 SELEX + 22690015 22690028 0.0E+00 TGAATGATTATGCA 14 Sox1_HMG_DBD_dimeric_14_1 SELEX - 22690015 22690028 4.0E-06 TGCATAATCATTCA 14 PAX6_PAX_DBD_monomeric_19_1 SELEX + 22697652 22697670 8.0E-06 GCTCATGCTTGACTACTTC 19 SOX10_HMG_full_dimeric_14_1 SELEX + 22690019 22690032 7.0E-06 TGATTATGCAGGCA 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 22690017 22690030 5.0E-06 CCTGCATAATCATT 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 22692617 22692633 1.0E-06 CTATTAAATTTGGCTTA 17 Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 22697697 22697709 1.0E-06 AGAAATGGTTAAA 13 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 22692565 22692576 8.0E-06 AAAATAAATATC 12 FOXL1_forkhead_full_dimeric_13_1 SELEX - 22692566 22692578 1.0E-06 AAAAAATAAATAT 13 SOX8_HMG_DBD_dimeric_16_1 SELEX + 22690115 22690130 8.0E-06 AACCATTTGCAAAGTT 16 ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX + 22690166 22690182 2.0E-06 AAGGGGAAACAAGGGCG 17 HNF1B_MA0153.1 JASPAR + 22697691 22697702 0.0E+00 TTACTGTTTAAC 12 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 22692566 22692576 1.0E-06 AAAATAAATAT 11 ZNF232_C2H2_full_monomeric_19_1 SELEX + 22690203 22690221 2.0E-06 TTGCTACAGATAGACTAAC 19 SOX7_HMG_full_dimeric_17_2 SELEX - 22690212 22690228 3.0E-06 AATGAACGTTAGTCTAT 17 SOX8_HMG_DBD_dimeric_14_1 SELEX + 22689964 22689977 7.0E-06 TGTATATCCAGCCA 14 SOX8_HMG_DBD_dimeric_14_1 SELEX + 22690019 22690032 6.0E-06 TGATTATGCAGGCA 14 HOMEZ_HOMEZ_DBD_monomer-or-dimer_12_1 SELEX - 22692626 22692637 9.0E-06 CAAACTATTAAA 12 Pax4_MA0068.1 JASPAR + 22692554 22692583 4.0E-06 GAAAACATTTCGATATTTATTTTTTCTCTC 30 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 22690225 22690240 7.0E-06 AAAAAGATTCTAAATG 16 TEAD1_TEA_full_monomeric_10_1 SELEX + 22690077 22690086 6.0E-06 TACATTCCAC 10 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 22690225 22690240 9.0E-06 AAAAAGATTCTAAATG 16 SOX8_HMG_full_dimeric_13_1 SELEX - 22690215 22690227 7.0E-06 ATGAACGTTAGTC 13 Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX + 22690304 22690320 4.0E-06 TGGGAGGGTCAAGATCA 17 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 22692567 22692577 2.0E-06 AAAAATAAATA 11 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 22697689 22697703 4.0E-06 AGTTACTGTTTAACC 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 22697689 22697703 3.0E-06 GGTTAAACAGTAACT 15 ONECUT2_CUT_DBD_monomeric_14_1 SELEX - 22692565 22692578 8.0E-06 AAAAAATAAATATC 14 FOXI1_MA0042.1 JASPAR + 22692564 22692575 1.0E-05 CGATATTTATTT 12 SOX9_HMG_full_dimeric_16_3 SELEX + 22690018 22690033 1.0E-05 ATGATTATGCAGGCAG 16 CTCF_C2H2_full_monomeric_17_1 SELEX + 22692531 22692547 4.0E-06 ACTGCCATCTAGCGTTC 17 Lhx3_MA0135.1 JASPAR + 22692623 22692635 6.0E-06 AAATTTAATAGTT 13 SOX14_HMG_DBD_dimeric_15_1 SELEX + 22690213 22690227 7.0E-06 TAGACTAACGTTCAT 15 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 22692567 22692577 1.0E-06 AAAAATAAATA 11 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 22697690 22697702 7.0E-06 GTTACTGTTTAAC 13 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 22697690 22697702 4.0E-06 GTTAAACAGTAAC 13 Foxd3_MA0041.1 JASPAR + 22692568 22692579 8.0E-06 ATTTATTTTTTC 12 TEAD3_TEA_DBD_monomeric_8_1 SELEX + 22690078 22690085 1.0E-05 ACATTCCA 8 Tp53_p53l_DBD_dimeric_17_1 SELEX + 22690001 22690017 8.0E-06 ACATGGCTGAAACATGA 17 TEAD4_TEA_DBD_monomeric_10_1 SELEX + 22690077 22690086 8.0E-06 TACATTCCAC 10 IRF3_IRF_full_trimeric_21_1 SELEX + 22690157 22690177 5.0E-06 GCAAGATGGAAGGGGAAACAA 21 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 22697689 22697703 5.0E-06 AGTTACTGTTTAACC 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 22697689 22697703 3.0E-06 GGTTAAACAGTAACT 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 22692567 22692579 1.0E-06 GAAAAAATAAATA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 22692567 22692579 3.0E-06 GAAAAAATAAATA 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 22692566 22692576 3.0E-06 AAAATAAATAT 11 HNF1A_MA0046.1 JASPAR + 22697689 22697702 2.0E-06 AGTTACTGTTTAAC 14 ONECUT3_CUT_DBD_monomeric_14_1 SELEX - 22692565 22692578 3.0E-06 AAAAAATAAATATC 14 TEAD1_MA0090.1 JASPAR + 22690077 22690088 1.0E-06 TACATTCCACTG 12 V_FOXP1_01_M00987 TRANSFAC - 22692503 22692522 5.0E-06 TTTTTTAGGTTTGCAAGTTG 20 V_FOXP1_01_M00987 TRANSFAC + 22692566 22692585 7.0E-06 ATATTTATTTTTTCTCTCAA 20 V_HNF3B_01_M00131 TRANSFAC + 22692562 22692576 1.0E-06 TTCGATATTTATTTT 15 V_FREAC7_01_M00293 TRANSFAC - 22692563 22692578 2.0E-06 AAAAAATAAATATCGA 16 V_AR_02_M00953 TRANSFAC - 22697781 22697807 5.0E-06 CAAAAAGAGACAGGCTGTTCTCGGCTT 27 V_FOXA2_04_M02749 TRANSFAC - 22692562 22692578 8.0E-06 AAAAAATAAATATCGAA 17 V_HMGIY_Q3_M01010 TRANSFAC - 22692516 22692530 0.0E+00 ATTGCAATTTTTTTA 15 V_FOXD3_01_M00130 TRANSFAC + 22692568 22692579 6.0E-06 ATTTATTTTTTC 12 V_IK_Q5_M01169 TRANSFAC + 22690302 22690311 5.0E-06 GTTGGGAGGG 10 V_CBF_02_M01080 TRANSFAC + 22690101 22690116 7.0E-06 AGTAATGTGGTCACAA 16 V_FOXO3A_Q1_M01137 TRANSFAC - 22692567 22692578 4.0E-06 AAAAAATAAATA 12 V_HNF3_Q6_01_M01012 TRANSFAC + 22692562 22692579 0.0E+00 TTCGATATTTATTTTTTC 18 V_BRN2_01_M00145 TRANSFAC - 22690222 22690237 1.0E-05 AAGATTCTAAATGAAC 16 V_BRN2_01_M00145 TRANSFAC - 22690260 22690275 2.0E-06 GGCATTCAAAATGCTC 16 V_TCFAP2E_04_M02926 TRANSFAC + 22692512 22692525 2.0E-06 AACCTAAAAAAATT 14 V_TCFAP2E_04_M02926 TRANSFAC - 22692571 22692584 2.0E-06 TGAGAGAAAAAATA 14 V_NKX62_Q2_M00489 TRANSFAC - 22692565 22692576 1.0E-06 AAAATAAATATC 12 V_AR_03_M00956 TRANSFAC - 22697781 22697807 8.0E-06 CAAAAAGAGACAGGCTGTTCTCGGCTT 27 V_CEBPE_Q6_M01868 TRANSFAC + 22692588 22692601 7.0E-06 TACAATTGCTTCAG 14 V_OCT1_02_M00136 TRANSFAC + 22690018 22690032 7.0E-06 ATGATTATGCAGGCA 15 V_STAF_01_M00262 TRANSFAC + 22697706 22697727 5.0E-06 TTCTCCCACCATCGACTGGATT 22 V_HNF1_Q6_M00790 TRANSFAC + 22697688 22697705 3.0E-06 GAGTTACTGTTTAACCAT 18 V_NKX61_01_M00424 TRANSFAC + 22692624 22692636 2.0E-06 AATTTAATAGTTT 13 V_HNF1B_04_M02266 TRANSFAC + 22697691 22697702 0.0E+00 TTACTGTTTAAC 12 V_ARID3A_02_M02839 TRANSFAC - 22692559 22692573 6.0E-06 ATAAATATCGAAATG 15 V_EVI1_01_M00078 TRANSFAC + 22692609 22692624 6.0E-06 TGACAACATAAGCCAA 16 V_HNF3_Q6_M00791 TRANSFAC - 22692565 22692577 7.0E-06 AAAAATAAATATC 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 22692567 22692577 1.0E-06 TATTTATTTTT 11 V_PAX2_01_M00098 TRANSFAC - 22697650 22697668 1.0E-06 AGTAGTCAAGCATGAGCAA 19 V_HOX13_01_M00023 TRANSFAC - 22690312 22690341 2.0E-06 AGAATTCAGCCCTATTAGTCATGATCTTGA 30 V_OCT1_04_M00138 TRANSFAC - 22692553 22692575 5.0E-06 AAATAAATATCGAAATGTTTTCA 23 V_GR_01_M00955 TRANSFAC - 22697781 22697807 7.0E-06 CAAAAAGAGACAGGCTGTTCTCGGCTT 27 V_TEF_01_M01305 TRANSFAC + 22690077 22690088 1.0E-06 TACATTCCACTG 12 V_XFD2_01_M00268 TRANSFAC - 22692563 22692576 1.0E-06 AAAATAAATATCGA 14 V_TBP_06_M02814 TRANSFAC + 22692563 22692578 1.0E-05 TCGATATTTATTTTTT 16 V_ISGF4G_04_M02875 TRANSFAC + 22692553 22692566 5.0E-06 TGAAAACATTTCGA 14 V_GCNF_01_M00526 TRANSFAC + 22690305 22690322 6.0E-06 GGGAGGGTCAAGATCATG 18 V_CIZ_01_M00734 TRANSFAC - 22692571 22692579 3.0E-06 GAAAAAATA 9 V_MTF1_06_M02882 TRANSFAC - 22692565 22692578 4.0E-06 AAAAAATAAATATC 14 V_HNF1_01_M00132 TRANSFAC + 22697689 22697703 2.0E-06 AGTTACTGTTTAACC 15 V_FOXL1_04_M02753 TRANSFAC - 22692562 22692578 4.0E-06 AAAAAATAAATATCGAA 17 V_MYOGNF1_01_M00056 TRANSFAC - 22692497 22692525 3.0E-06 AATTTTTTTAGGTTTGCAAGTTGCAGTAT 29 V_TEF1_Q6_03_M01817 TRANSFAC - 22690078 22690086 6.0E-06 GTGGAATGT 9 V_ZBTB12_04_M02928 TRANSFAC - 22692541 22692555 4.0E-06 TCACGATAGAACGCT 15 V_FOX_Q2_M00809 TRANSFAC + 22692564 22692576 5.0E-06 CGATATTTATTTT 13 V_PLZF_02_M01075 TRANSFAC - 22692556 22692584 8.0E-06 TGAGAGAAAAAATAAATATCGAAATGTTT 29 V_DMRT2_01_M01147 TRANSFAC - 22690136 22690151 5.0E-06 TTTTTGACTACATTTT 16 V_SRF_06_M02916 TRANSFAC - 22692566 22692582 8.0E-06 AGAGAAAAAATAAATAT 17 V_SRF_06_M02916 TRANSFAC - 22692567 22692583 6.0E-06 GAGAGAAAAAATAAATA 17 V_SRF_06_M02916 TRANSFAC - 22692570 22692586 6.0E-06 ATTGAGAGAAAAAATAA 17 V_HFH3_01_M00289 TRANSFAC + 22692564 22692576 9.0E-06 CGATATTTATTTT 13 V_FOXJ2_01_M00422 TRANSFAC - 22692562 22692579 1.0E-06 GAAAAAATAAATATCGAA 18 V_FOXO1_04_M01969 TRANSFAC - 22692554 22692573 6.0E-06 ATAAATATCGAAATGTTTTC 20 V_SATB1_01_M01232 TRANSFAC - 22690318 22690329 4.0E-06 TATTAGTCATGA 12 V_PR_02_M00957 TRANSFAC - 22697781 22697807 9.0E-06 CAAAAAGAGACAGGCTGTTCTCGGCTT 27 V_DR3_Q4_M00966 TRANSFAC - 22697726 22697746 1.0E-06 AGTGAACTTCCTGCACTGTAA 21 V_MAFK_04_M02880 TRANSFAC + 22692517 22692531 0.0E+00 AAAAAAATTGCAATA 15 V_HNF1A_01_M02162 TRANSFAC + 22697689 22697702 2.0E-06 AGTTACTGTTTAAC 14 V_TCF3_05_M02920 TRANSFAC + 22692511 22692525 9.0E-06 AAACCTAAAAAAATT 15 V_AR_Q2_M00447 TRANSFAC + 22697730 22697744 3.0E-06 AGTGCAGGAAGTTCA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.