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DDX55 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 57696 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 chr12 + 124081671 - 124087171 124086671 Transcription Factor Binding Sites   Download all TFBS in the DDX55 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 124088929 124088945 1.0E-05 TTATTTAAAAAAAATTT 17 ELF4_ETS_full_monomeric_12_1 SELEX - 124086187 124086198 5.0E-06 TTCCCGGAAGTT 12 FOXL1_forkhead_full_dimeric_13_1 SELEX + 124088937 124088949 4.0E-06 TTTAAATAAATGA 13 STAT1_MA0137.2 JASPAR - 124086187 124086201 3.0E-06 ACTTTCCCGGAAGTT 15 Barhl1_homeodomain_DBD_monomeric_10_1 SELEX + 124082997 124083006 7.0E-06 ATTAAATGAT 10 E2F7_E2F_DBD_dimeric_14_1 SELEX + 124086414 124086427 5.0E-06 CCCTCCCGCCAAAA 14 SPIB_ETS_DBD_monomeric_14_1 SELEX + 124086620 124086633 7.0E-06 GGGAAGCGGAAGTG 14 MYBL2_MYB_DBD_monomeric_11_1 SELEX + 124086004 124086014 1.0E-05 TGAACCGTTAT 11 ELF3_ETS_full_monomeric_13_1 SELEX - 124086186 124086198 3.0E-06 TTCCCGGAAGTTA 13 E2F8_E2F_DBD_dimeric_12_1 SELEX + 124086415 124086426 4.0E-06 CCTCCCGCCAAA 12 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 124086134 124086147 1.0E-06 GCAAACAGTGAACA 14 Gfi_MA0038.1 JASPAR - 124087476 124087485 7.0E-06 TCAATCACTG 10 BARHL2_homeodomain_full_monomeric_10_1 SELEX + 124082997 124083006 5.0E-06 ATTAAATGAT 10 NFATC1_NFAT_full_dimeric_20_1 SELEX + 124088987 124089006 3.0E-06 TGTGGAGAATGTATTTCCAG 20 TEAD3_TEA_DBD_dimeric_17_1 SELEX - 124088982 124088998 1.0E-06 ACATTCTCCACATTCCC 17 Foxd3_MA0041.1 JASPAR - 124086202 124086213 1.0E-06 GAATGTTGGTTT 12 Stat3_MA0144.1 JASPAR + 124086190 124086199 5.0E-06 TTCCGGGAAA 10 EHF_ETS_full_monomeric_12_1 SELEX - 124086187 124086198 5.0E-06 TTCCCGGAAGTT 12 TEAD1_TEA_full_dimeric_17_1 SELEX - 124088982 124088998 1.0E-06 ACATTCTCCACATTCCC 17 ELF3_ETS_DBD_monomeric_12_1 SELEX - 124086187 124086198 5.0E-06 TTCCCGGAAGTT 12 ETV6_ETS_full_monomeric_10_1 SELEX + 124086624 124086633 1.0E-06 AGCGGAAGTG 10 ETV6_ETS_full_dimeric_15_1 SELEX + 124086619 124086633 0.0E+00 CGGGAAGCGGAAGTG 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 124086198 124086210 3.0E-06 AAGTAAACCAACA 13 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 124086134 124086147 2.0E-06 GCAAACAGTGAACA 14 V_ELF5_02_M01980 TRANSFAC - 124086187 124086196 5.0E-06 CCCGGAAGTT 10 V_CEBPG_Q6_M00622 TRANSFAC - 124088934 124088946 0.0E+00 TTTATTTAAAAAA 13 V_AP2ALPHA_Q6_M01857 TRANSFAC + 124086022 124086032 9.0E-06 AGCCTCCAGCC 11 V_HNF3B_01_M00131 TRANSFAC - 124086201 124086215 5.0E-06 CTGAATGTTGGTTTA 15 V_STAT3_01_M00225 TRANSFAC + 124086184 124086204 3.0E-06 CCTAACTTCCGGGAAAGTAAA 21 V_STAT3_01_M00225 TRANSFAC - 124086184 124086204 2.0E-06 TTTACTTTCCCGGAAGTTAGG 21 V_DBX1_01_M01483 TRANSFAC + 124088928 124088944 1.0E-05 AAAATTTTTTTTAAATA 17 V_DBX1_01_M01483 TRANSFAC + 124088929 124088945 7.0E-06 AAATTTTTTTTAAATAA 17 V_DBX1_01_M01483 TRANSFAC - 124088932 124088948 0.0E+00 CATTTATTTAAAAAAAA 17 V_DBX1_01_M01483 TRANSFAC - 124088933 124088949 1.0E-05 TCATTTATTTAAAAAAA 17 V_FREAC7_01_M00293 TRANSFAC + 124088937 124088952 8.0E-06 TTTAAATAAATGAAGT 16 V_OBOX5_05_M03066 TRANSFAC + 124082990 124083006 9.0E-06 AAGACAGATTAAATGAT 17 V_HMGIY_Q3_M01010 TRANSFAC - 124088938 124088952 5.0E-06 ACTTCATTTATTTAA 15 V_FOXD3_01_M00130 TRANSFAC - 124086202 124086213 2.0E-06 GAATGTTGGTTT 12 V_NKX29_01_M01352 TRANSFAC - 124089140 124089156 3.0E-06 TTTCAAGCACTTGATAG 17 V_NKX29_01_M01352 TRANSFAC + 124089141 124089157 1.0E-06 TATCAAGTGCTTGAAAT 17 V_BCL6_01_M01183 TRANSFAC - 124086197 124086212 7.0E-06 AATGTTGGTTTACTTT 16 V_BCL6_01_M01183 TRANSFAC - 124088928 124088943 3.0E-06 ATTTAAAAAAAATTTT 16 V_BCL6_01_M01183 TRANSFAC - 124088929 124088944 1.0E-06 TATTTAAAAAAAATTT 16 V_GABP_B_M00341 TRANSFAC + 124086624 124086635 8.0E-06 AGCGGAAGTGCT 12 V_ELF1_01_M01975 TRANSFAC - 124086187 124086196 8.0E-06 CCCGGAAGTT 10 V_HNF3_Q6_01_M01012 TRANSFAC - 124086128 124086145 5.0E-06 TTCACTGTTTGCCTGGGC 18 V_HNF3_Q6_01_M01012 TRANSFAC - 124086198 124086215 6.0E-06 CTGAATGTTGGTTTACTT 18 V_STAT5B_01_M00459 TRANSFAC - 124086187 124086201 7.0E-06 ACTTTCCCGGAAGTT 15 V_HFH4_01_M00742 TRANSFAC - 124088939 124088951 5.0E-06 CTTCATTTATTTA 13 V_E2A_Q2_M00804 TRANSFAC + 124086367 124086380 1.0E-06 CCACCTGCCTCCGA 14 V_TCFAP2E_04_M02926 TRANSFAC - 124088931 124088944 1.0E-06 TATTTAAAAAAAAT 14 V_TCFAP2E_04_M02926 TRANSFAC - 124088932 124088945 3.0E-06 TTATTTAAAAAAAA 14 V_MEF2A_Q6_M02024 TRANSFAC - 124088935 124088944 4.0E-06 TATTTAAAAA 10 V_AR_03_M00956 TRANSFAC + 124086147 124086173 3.0E-06 AGAGGAATGGGACAGTGTTCTTAGTTA 27 V_ELF2_02_M02054 TRANSFAC - 124086187 124086196 4.0E-06 CCCGGAAGTT 10 V_SPIC_01_M02042 TRANSFAC + 124086624 124086633 9.0E-06 AGCGGAAGTG 10 V_ELF4_04_M02850 TRANSFAC - 124088927 124088943 0.0E+00 ATTTAAAAAAAATTTTT 17 V_ELF4_04_M02850 TRANSFAC - 124088928 124088944 1.0E-06 TATTTAAAAAAAATTTT 17 V_ELF4_04_M02850 TRANSFAC - 124088929 124088945 2.0E-06 TTATTTAAAAAAAATTT 17 V_ELF4_04_M02850 TRANSFAC - 124088930 124088946 5.0E-06 TTTATTTAAAAAAAATT 17 V_GC_01_M00255 TRANSFAC + 124085986 124085999 9.0E-06 GGGAGGCGGAGCTT 14 V_OBOX5_02_M01480 TRANSFAC + 124082990 124083006 9.0E-06 AAGACAGATTAAATGAT 17 V_DBX2_01_M01360 TRANSFAC + 124088938 124088953 4.0E-06 TTAAATAAATGAAGTC 16 V_LMX1_01_M01409 TRANSFAC - 124088933 124088949 4.0E-06 TCATTTATTTAAAAAAA 17 V_PR_01_M00954 TRANSFAC + 124086147 124086173 9.0E-06 AGAGGAATGGGACAGTGTTCTTAGTTA 27 V_ZFP105_03_M02827 TRANSFAC - 124088929 124088943 9.0E-06 ATTTAAAAAAAATTT 15 V_HIC1_06_M02867 TRANSFAC + 124088961 124088976 3.0E-06 TGAGATGCCCATAAGA 16 V_TBX5_02_M01020 TRANSFAC + 124087427 124087436 8.0E-06 TAGGGTGTTA 10 V_EVI1_01_M00078 TRANSFAC - 124086922 124086937 4.0E-06 AGACAAGGCAAGAGCC 16 V_MEF2_03_M00232 TRANSFAC + 124088929 124088950 5.0E-06 AAATTTTTTTTAAATAAATGAA 22 V_EHF_02_M01974 TRANSFAC - 124086187 124086196 8.0E-06 CCCGGAAGTT 10 V_GADP_01_M01258 TRANSFAC - 124086622 124086633 5.0E-06 CACTTCCGCTTC 12 V_OCT1_04_M00138 TRANSFAC - 124088929 124088951 4.0E-06 CTTCATTTATTTAAAAAAAATTT 23 V_GR_01_M00955 TRANSFAC + 124086147 124086173 8.0E-06 AGAGGAATGGGACAGTGTTCTTAGTTA 27 V_SOX12_04_M02900 TRANSFAC + 124087332 124087347 6.0E-06 AGCTAGAGAAAGGATA 16 V_NCX_02_M01420 TRANSFAC - 124088932 124088948 2.0E-06 CATTTATTTAAAAAAAA 17 V_ARID3A_04_M02735 TRANSFAC - 124088929 124088945 5.0E-06 TTATTTAAAAAAAATTT 17 V_ARID3A_04_M02735 TRANSFAC - 124088933 124088949 2.0E-06 TCATTTATTTAAAAAAA 17 V_ARID3A_04_M02735 TRANSFAC + 124088934 124088950 5.0E-06 TTTTTTAAATAAATGAA 17 V_TBP_06_M02814 TRANSFAC + 124088931 124088946 2.0E-06 ATTTTTTTTAAATAAA 16 V_TBP_06_M02814 TRANSFAC - 124088931 124088946 2.0E-06 TTTATTTAAAAAAAAT 16 V_TBP_06_M02814 TRANSFAC + 124088933 124088948 0.0E+00 TTTTTTTAAATAAATG 16 V_TBP_06_M02814 TRANSFAC - 124088933 124088948 3.0E-06 CATTTATTTAAAAAAA 16 V_TBP_06_M02814 TRANSFAC - 124088935 124088950 6.0E-06 TTCATTTATTTAAAAA 16 V_LMO2COM_01_M00277 TRANSFAC + 124086747 124086758 2.0E-06 CCGCAGGTGCTG 12 V_STAT3_03_M01595 TRANSFAC + 124086188 124086203 1.0E-06 ACTTCCGGGAAAGTAA 16 V_ELF4_01_M01979 TRANSFAC - 124086187 124086196 8.0E-06 CCCGGAAGTT 10 V_NKX23_01_M01457 TRANSFAC + 124089141 124089156 5.0E-06 TATCAAGTGCTTGAAA 16 V_NKX23_01_M01457 TRANSFAC - 124089141 124089156 0.0E+00 TTTCAAGCACTTGATA 16 V_LIM1_01_M01418 TRANSFAC - 124088933 124088949 1.0E-05 TCATTTATTTAAAAAAA 17 V_OTX2_Q3_M01719 TRANSFAC + 124082991 124083003 6.0E-06 AGACAGATTAAAT 13 V_MTF1_06_M02882 TRANSFAC - 124088932 124088945 5.0E-06 TTATTTAAAAAAAA 14 V_TTF1_Q5_M02034 TRANSFAC - 124089139 124089152 5.0E-06 AAGCACTTGATAGC 14 V_GABPBETA_Q3_M01876 TRANSFAC + 124086624 124086634 2.0E-06 AGCGGAAGTGC 11 V_EHF_06_M02745 TRANSFAC - 124086186 124086200 1.0E-06 CTTTCCCGGAAGTTA 15 V_E2F_Q6_01_M00920 TRANSFAC + 124086416 124086427 5.0E-06 CTCCCGCCAAAA 12 V_FOXL1_04_M02753 TRANSFAC + 124088933 124088949 1.0E-05 TTTTTTTAAATAAATGA 17 V_NKX3A_02_M01383 TRANSFAC + 124089141 124089157 9.0E-06 TATCAAGTGCTTGAAAT 17 V_TCF7_04_M02921 TRANSFAC - 124088933 124088947 5.0E-06 ATTTATTTAAAAAAA 15 V_GATA3_01_M00077 TRANSFAC + 124087423 124087431 4.0E-06 GAGATAGGG 9 V_NKX22_01_M00485 TRANSFAC + 124089143 124089152 6.0E-06 TCAAGTGCTT 10 V_LMX1B_01_M01363 TRANSFAC + 124088933 124088949 6.0E-06 TTTTTTTAAATAAATGA 17 V_STAT_01_M00223 TRANSFAC - 124086190 124086198 7.0E-06 TTCCCGGAA 9 V_STAT1STAT1_Q3_M01212 TRANSFAC - 124086188 124086200 4.0E-06 CTTTCCCGGAAGT 13 V_FOX_Q2_M00809 TRANSFAC - 124086197 124086209 7.0E-06 GTTGGTTTACTTT 13 V_FOX_Q2_M00809 TRANSFAC - 124086201 124086213 1.0E-06 GAATGTTGGTTTA 13 V_BBX_03_M02739 TRANSFAC + 124088939 124088953 5.0E-06 TAAATAAATGAAGTC 15 V_E2F_Q4_01_M00919 TRANSFAC + 124086417 124086427 2.0E-06 TCCCGCCAAAA 11 V_SRF_06_M02916 TRANSFAC - 124088927 124088943 0.0E+00 ATTTAAAAAAAATTTTT 17 V_SRF_06_M02916 TRANSFAC - 124088928 124088944 3.0E-06 TATTTAAAAAAAATTTT 17 V_SRF_06_M02916 TRANSFAC - 124088929 124088945 2.0E-06 TTATTTAAAAAAAATTT 17 V_PUR1_Q4_M01721 TRANSFAC + 124086155 124086163 6.0E-06 GGGACAGTG 9 V_BRN3C_01_M01408 TRANSFAC + 124088938 124088953 7.0E-06 TTAAATAAATGAAGTC 16 V_HOXD10_01_M01375 TRANSFAC - 124088932 124088948 6.0E-06 CATTTATTTAAAAAAAA 17 V_ELK1_03_M01163 TRANSFAC + 124086623 124086633 1.0E-05 AAGCGGAAGTG 11 V_OBOX5_01_M01381 TRANSFAC + 124082990 124083006 2.0E-06 AAGACAGATTAAATGAT 17 V_STAT1_Q6_M01823 TRANSFAC + 124086190 124086199 1.0E-06 TTCCGGGAAA 10 V_GLIS2_04_M02863 TRANSFAC - 124088933 124088946 4.0E-06 TTTATTTAAAAAAA 14 V_STAT1_05_M01260 TRANSFAC + 124086187 124086208 4.0E-06 AACTTCCGGGAAAGTAAACCAA 22 V_OBOX6_06_M03067 TRANSFAC - 124082990 124083006 2.0E-06 ATCATTTAATCTGTCTT 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.