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COL20A1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
57642 collagen, type XX, alpha 1 chr20 +61919537 - 61925037 61924537

Transcription Factor Binding Sites

 
Download all TFBS in the COL20A1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR - 61922766 61922784 6.0E-06 TGGCCAGAGGAGGGCGCCC 19
NFIA_NFI_full_dimeric_15_1 SELEX + 61928848 61928862 6.0E-06 TGGGCAGGTTGCCAG 15
EWSR1-FLI1_MA0149.1 JASPAR - 61928108 61928125 9.0E-06 GGCTGAAAGGCAGGAATG 18
NFIX_NFI_full_dimeric_15_2 SELEX - 61928848 61928862 6.0E-06 CTGGCAACCTGCCCA 15
INSM1_MA0155.1 JASPAR + 61928304 61928315 2.0E-06 TTTCAGGGGGCA 12
NFIB_NFI_full_dimeric_15_1 SELEX + 61928848 61928862 5.0E-06 TGGGCAGGTTGCCAG 15
TEAD1_MA0090.1 JASPAR + 61928106 61928117 5.0E-06 CACATTCCTGCC 12
V_MINI20_B_M00324 TRANSFAC - 61923753 61923773 6.0E-06 TCCCGGCCTCACTGCACAGCC 21
V_KLF15_Q2_M01714 TRANSFAC + 61922549 61922562 9.0E-06 GAGCAGGGGCGGGG 14
V_SP1_Q6_01_M00931 TRANSFAC + 61922554 61922563 7.0E-06 GGGGCGGGGT 10
V_NERF_Q2_M00531 TRANSFAC - 61928927 61928944 6.0E-06 CACCAGGAAGAGGCTCAG 18
V_CMYB_Q5_M01821 TRANSFAC - 61922871 61922881 5.0E-06 ACCAACTGGCT 11
V_SP1_02_M01303 TRANSFAC + 61922554 61922564 3.0E-06 GGGGCGGGGTG 11
V_MTERF_01_M01245 TRANSFAC - 61928315 61928328 9.0E-06 TGGAGAGGGTTGGT 14
V_NFE4_Q5_M02105 TRANSFAC + 61928318 61928329 3.0E-06 AACCCTCTCCAG 12
V_SP1SP3_Q4_M01219 TRANSFAC + 61928357 61928367 5.0E-06 CCGCCCCCTCT 11
V_TEF_01_M01305 TRANSFAC + 61928106 61928117 5.0E-06 CACATTCCTGCC 12
V_KLF7_03_M02773 TRANSFAC - 61922551 61922566 7.0E-06 TTCACCCCGCCCCTGC 16
V_SP1_01_M00008 TRANSFAC + 61922554 61922563 3.0E-06 GGGGCGGGGT 10
V_CTCF_02_M01259 TRANSFAC - 61922768 61922787 6.0E-06 CCATGGCCAGAGGAGGGCGC 20
V_CTCF_01_M01200 TRANSFAC - 61922766 61922785 5.0E-06 ATGGCCAGAGGAGGGCGCCC 20
V_INSM1_01_M02268 TRANSFAC + 61928304 61928315 2.0E-06 TTTCAGGGGGCA 12
V_NEUROD_02_M01288 TRANSFAC + 61928860 61928871 5.0E-06 CAGCTGCTGTGT 12
V_TEF1_Q6_03_M01817 TRANSFAC - 61928107 61928115 9.0E-06 CAGGAATGT 9
V_CREB_Q2_M00177 TRANSFAC - 61923781 61923792 1.0E-05 GGTGACGCAAGT 12
V_MYB_Q3_M00773 TRANSFAC + 61922869 61922879 9.0E-06 ACAGCCAGTTG 11
V_ZFP281_01_M01597 TRANSFAC - 61928389 61928399 5.0E-06 TGGGGGATGGG 11
V_EGR1_06_M02744 TRANSFAC + 61928356 61928369 1.0E-05 GCCGCCCCCTCTTC 14
V_ZFP281_04_M02831 TRANSFAC + 61928387 61928401 1.0E-05 CACCCATCCCCCATC 15
V_EWSR1FLI1_01_M02252 TRANSFAC - 61928108 61928125 9.0E-06 GGCTGAAAGGCAGGAATG 18
V_SP1_Q2_01_M00933 TRANSFAC - 61922553 61922562 7.0E-06 CCCCGCCCCT 10
V_BRCA_01_M01082 TRANSFAC - 61928024 61928031 1.0E-05 TTCTGTTG 8
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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