Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

PDZD4


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
57595 PDZ domain containing 4 chrX -153095503 - 153101003 153096003

Transcription Factor Binding Sites

 
Download all TFBS in the PDZD4 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
HOXC13_homeodomain_DBD_monomeric_11_1 SELEX + 153093781 153093791 1.0E-06 CCTCGTAAAAT 11
HOXD13_homeodomain_DBD_monomeric_11_1 SELEX + 153093781 153093791 1.0E-06 CCTCGTAAAAT 11
HOXD11_homeodomain_DBD_monomeric_10_1 SELEX + 153093782 153093791 8.0E-06 CTCGTAAAAT 10
SPIB_ETS_DBD_monomeric_14_1 SELEX + 153097329 153097342 9.0E-06 AGAAAGCAGAACTT 14
ZNF524_C2H2_full_dimeric_12_1 SELEX + 153095970 153095981 8.0E-06 TCCCTCGCACCC 12
RFX2_RFX_DBD_dimeric_15_1 SELEX + 153096026 153096040 4.0E-06 CGTTGCCAGGCTACG 15
RFX3_RFX_DBD_dimeric_15_1 SELEX + 153096026 153096040 1.0E-06 CGTTGCCAGGCTACG 15
SOX9_HMG_full_dimeric_16_3 SELEX - 153097448 153097463 7.0E-06 GTGAATGTTCTTCCAT 16
RFX4_RFX_DBD_dimeric_15_1 SELEX + 153096026 153096040 0.0E+00 CGTTGCCAGGCTACG 15
ERF_ETS_DBD_monomeric_10_1 SELEX + 153092648 153092657 9.0E-06 ACAGGAAGTG 10
HOXB13_homeodomain_DBD_monomeric_11_1 SELEX + 153093781 153093791 1.0E-06 CCTCGTAAAAT 11
HOXA13_homeodomain_full_monomeric_11_1 SELEX + 153093781 153093791 2.0E-06 CCTCGTAAAAT 11
ELF5_ETS_full_monomeric_11_1 SELEX + 153092647 153092657 6.0E-06 AACAGGAAGTG 11
HOXC10_homeodomain_DBD_monomeric_10_3 SELEX + 153093782 153093791 9.0E-06 CTCGTAAAAT 10
Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX + 153093782 153093790 6.0E-06 CTCGTAAAA 9
SPI1_ETS_full_monomeric_14_1 SELEX + 153097329 153097342 8.0E-06 AGAAAGCAGAACTT 14
V_DUXL_01_M01390 TRANSFAC - 153093794 153093810 1.0E-05 TGGCCCAATCAAAGCCG 17
V_FOXA2_04_M02749 TRANSFAC + 153094931 153094947 3.0E-06 AGAAAGTACACAAATGC 17
V_MTF1_Q4_M00650 TRANSFAC - 153094916 153094929 9.0E-06 TGTGCACCCTGCAG 14
V_ETS_B_M00340 TRANSFAC + 153097492 153097505 6.0E-06 AAGAGGAAGCCCTT 14
V_GABP_B_M00341 TRANSFAC + 153092648 153092659 1.0E-06 ACAGGAAGTGCA 12
V_CEBP_01_M00159 TRANSFAC - 153094384 153094396 9.0E-06 TGTTTGGAAACCT 13
V_AP4_Q6_01_M00927 TRANSFAC - 153097437 153097445 6.0E-06 ACCAGCTGC 9
V_HOXA13_03_M01430 TRANSFAC + 153093778 153093793 1.0E-06 TCTCCTCGTAAAATCC 16
V_HOXC13_01_M01317 TRANSFAC + 153093778 153093793 2.0E-06 TCTCCTCGTAAAATCC 16
V_WT1_Q6_01_M02036 TRANSFAC + 153095665 153095674 4.0E-06 CGCCCCCGCC 10
V_ETS_Q4_M00771 TRANSFAC - 153092649 153092660 7.0E-06 TTGCACTTCCTG 12
V_RFX1_01_M00280 TRANSFAC - 153096025 153096041 1.0E-05 CCGTAGCCTGGCAACGC 17
V_KROX_Q6_M00982 TRANSFAC + 153095663 153095676 3.0E-06 CGCGCCCCCGCCGC 14
V_MATH1_Q2_M01716 TRANSFAC - 153094573 153094582 9.0E-06 CCACCTGGTG 10
V_MATH1_Q2_M01716 TRANSFAC + 153097437 153097446 3.0E-06 GCAGCTGGTG 10
V_HOXD11_01_M01434 TRANSFAC + 153093778 153093794 1.0E-05 TCTCCTCGTAAAATCCC 17
V_ISRE_01_M00258 TRANSFAC + 153097304 153097318 4.0E-06 GAGTTTCTTATCCAG 15
V_DUXBL_01_M02968 TRANSFAC - 153093794 153093810 1.0E-05 TGGCCCAATCAAAGCCG 17
V_CETS1P54_01_M00032 TRANSFAC + 153092648 153092657 9.0E-06 ACAGGAAGTG 10
V_ELK1_01_M00007 TRANSFAC + 153092645 153092660 0.0E+00 CTAACAGGAAGTGCAA 16
V_GATA4_Q3_M00632 TRANSFAC + 153095989 153096000 8.0E-06 AGAAAAAGGGCA 12
V_ELF1_Q6_M00746 TRANSFAC + 153097490 153097501 5.0E-06 GTAAGAGGAAGC 12
V_VJUN_01_M00036 TRANSFAC - 153097400 153097415 9.0E-06 AATATGACGCCATTCC 16
V_GABPBETA_Q3_M01876 TRANSFAC + 153092648 153092658 1.0E-06 ACAGGAAGTGC 11
V_MYOD_Q6_01_M00929 TRANSFAC + 153094570 153094587 6.0E-06 CCGCACCAGGTGGCCAGA 18
V_CNOT3_01_M01253 TRANSFAC + 153095660 153095669 8.0E-06 GGCCGCGCCC 10
V_FPM315_01_M01587 TRANSFAC - 153095643 153095654 9.0E-06 CGGGGAGGAGCG 12
V_P53_01_M00034 TRANSFAC + 153095952 153095971 2.0E-06 GGCCAGGCGCGGGCATGCTC 20
V_P53_01_M00034 TRANSFAC - 153095952 153095971 2.0E-06 GAGCATGCCCGCGCCTGGCC 20
V_EFC_Q6_M00626 TRANSFAC + 153096026 153096039 6.0E-06 CGTTGCCAGGCTAC 14
V_ELK1_03_M01163 TRANSFAC + 153092647 153092657 1.0E-05 AACAGGAAGTG 11
V_SOX5_04_M02910 TRANSFAC + 153092632 153092646 4.0E-06 GCTCATCATTTAGCT 15
V_SMAD1_01_M01590 TRANSFAC + 153092705 153092716 6.0E-06 CATAACAAAAAC 12
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL