Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ZNF319 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 57567 zinc finger protein 319 chr16 - 58033262 - 58038762 58033762 Transcription Factor Binding Sites   Download all TFBS in the ZNF319 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX - 58028918 58028929 1.0E-06 GCCACGCCCACC 12 MYBL2_MYB_DBD_dimeric_16_1 SELEX + 58028794 58028809 7.0E-06 GCAGTTGGGACGGTTG 16 SP3_C2H2_DBD_monomeric_11_1 SELEX - 58028919 58028929 1.0E-06 GCCACGCCCAC 11 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 58035788 58035805 3.0E-06 GCAATTGTATTCAAATCA 18 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 58028919 58028929 3.0E-06 GCCACGCCCAC 11 FOXA1_MA0148.1 JASPAR + 58033777 58033787 2.0E-06 TGTTTGCTTTT 11 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 58033775 58033786 2.0E-06 AAAGCAAACAAA 12 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 58028917 58028930 0.0E+00 AGCCACGCCCACCT 14 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 58035790 58035798 6.0E-06 TATTCAAAT 9 TBX1_TBX_DBD_dimeric_23_1 SELEX + 58033890 58033912 3.0E-06 GATCACTCCGCAAAGGGGAGAGA 23 POU2F3_POU_DBD_monomeric_9_1 SELEX - 58035790 58035798 6.0E-06 TATTCAAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 58035790 58035798 4.0E-06 TATTCAAAT 9 Klf4_MA0039.2 JASPAR + 58028920 58028929 1.0E-05 TGGGCGTGGC 10 ESR1_MA0112.2 JASPAR + 58033546 58033565 9.0E-06 TTCACAGGACAGTCTGGCCT 20 SP1_MA0079.2 JASPAR - 58034451 58034460 7.0E-06 CCCCGCCCCC 10 Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 58034347 58034356 9.0E-06 ACCAGCTGCT 10 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 58034939 58034954 2.0E-06 CAGCCCAAAGTCCAAG 16 SP4_C2H2_full_monomeric_17_1 SELEX - 58028916 58028932 1.0E-06 CCAGCCACGCCCACCTC 17 SP1_C2H2_DBD_monomeric_11_1 SELEX - 58028919 58028929 4.0E-06 GCCACGCCCAC 11 MYBL1_MYB_DBD_dimeric_17_1 SELEX + 58028793 58028809 5.0E-06 AGCAGTTGGGACGGTTG 17 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 58035788 58035805 3.0E-06 GCAATTGTATTCAAATCA 18 Foxd3_MA0041.1 JASPAR + 58033774 58033785 8.0E-06 TTTTGTTTGCTT 12 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 58028916 58028930 4.0E-06 AGCCACGCCCACCTC 15 Hltf_MA0109.1 JASPAR - 58033495 58033504 1.0E-05 AAACTTTTAA 10 SPDEF_ETS_full_putative-multimer_16_1 SELEX + 58033216 58033231 1.0E-05 GCAGGAAAATGTAAGA 16 HNF4A_MA0114.1 JASPAR - 58034941 58034953 8.0E-06 AGCCCAAAGTCCA 13 ELF1_ETS_full_monomeric_12_1 SELEX - 58033460 58033471 3.0E-06 AACCTGGAAGTG 12 NR3C1_MA0113.1 JASPAR - 58033549 58033566 1.0E-05 GAGGCCAGACTGTCCTGT 18 RUNX1_MA0002.2 JASPAR - 58033273 58033283 3.0E-06 CTCTGTGGTTA 11 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 58035788 58035805 5.0E-06 GCAATTGTATTCAAATCA 18 RREB1_MA0073.1 JASPAR + 58032508 58032527 9.0E-06 CACCACACCATCACAAACCA 20 Zfx_MA0146.1 JASPAR - 58034753 58034766 1.0E-06 GGCGCCCAGGCCTG 14 V_RUSH1A_02_M01107 TRANSFAC - 58033495 58033504 1.0E-05 AAACTTTTAA 10 V_FOXP1_01_M00987 TRANSFAC - 58033159 58033178 1.0E-06 TTGTGTGTGTGTGTGTGTGT 20 V_FOXP1_01_M00987 TRANSFAC + 58033776 58033795 9.0E-06 TTGTTTGCTTTTTCTGGCAT 20 V_HNF3B_01_M00131 TRANSFAC + 58033772 58033786 2.0E-06 TGTTTTGTTTGCTTT 15 V_AML_Q6_M00769 TRANSFAC - 58033271 58033285 6.0E-06 TGCTCTGTGGTTAGC 15 V_ZFP410_04_M02936 TRANSFAC + 58034901 58034917 1.0E-06 TTGATCCGCCCCTAACT 17 V_SMAD3_Q6_01_M01888 TRANSFAC + 58028904 58028916 3.0E-06 AGTCAGACAGAGG 13 V_FOXA2_04_M02749 TRANSFAC - 58033772 58033788 1.0E-06 AAAAAGCAAACAAAACA 17 V_ESR1_01_M02261 TRANSFAC + 58033546 58033565 9.0E-06 TTCACAGGACAGTCTGGCCT 20 V_ZFX_01_M01593 TRANSFAC - 58034392 58034407 1.0E-06 GCGTAGGCCGCGCCGC 16 V_ZFX_01_M01593 TRANSFAC + 58034750 58034765 2.0E-06 CGCCAGGCCTGGGCGC 16 V_ZFX_01_M01593 TRANSFAC + 58035286 58035301 1.0E-06 GCCCAGGCCCCGCCCC 16 V_FOXD3_01_M00130 TRANSFAC + 58033774 58033785 9.0E-06 TTTTGTTTGCTT 12 V_SP1_Q6_01_M00931 TRANSFAC - 58032660 58032669 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 58035292 58035301 4.0E-06 GGGGCGGGGC 10 V_ZFP740_03_M02834 TRANSFAC + 58032637 58032652 1.0E-05 CCTCCACCCCCACCCA 16 V_NFAT3_Q3_M01734 TRANSFAC - 58033218 58033227 3.0E-06 ACATTTTCCT 10 V_HNF4_Q6_M00967 TRANSFAC - 58034940 58034948 2.0E-06 AAAGTCCAA 9 V_POU2F3_01_M01476 TRANSFAC - 58035786 58035801 2.0E-06 TTGTATTCAAATCAGG 16 V_PLAG1_02_M01973 TRANSFAC + 58034271 58034286 2.0E-06 CCCCAGATGCGGCCCC 16 V_HNF3_Q6_01_M01012 TRANSFAC + 58033772 58033789 0.0E+00 TGTTTTGTTTGCTTTTTC 18 V_FOXJ1_03_M02750 TRANSFAC - 58033771 58033786 4.0E-06 AAAGCAAACAAAACAG 16 V_SP1_03_M02281 TRANSFAC - 58034451 58034460 7.0E-06 CCCCGCCCCC 10 V_HNF4A_03_M02220 TRANSFAC - 58034941 58034953 8.0E-06 AGCCCAAAGTCCA 13 V_HFH4_01_M00742 TRANSFAC + 58033774 58033786 2.0E-06 TTTTGTTTGCTTT 13 V_GKLF_02_M01588 TRANSFAC - 58028918 58028929 3.0E-06 GCCACGCCCACC 12 V_AP4_Q6_01_M00927 TRANSFAC + 58034347 58034355 6.0E-06 ACCAGCTGC 9 V_NR3C1_01_M02219 TRANSFAC - 58033549 58033566 1.0E-05 GAGGCCAGACTGTCCTGT 18 V_GC_01_M00255 TRANSFAC - 58035290 58035303 4.0E-06 CAGGGGCGGGGCCT 14 V_RUNX1_01_M02257 TRANSFAC - 58033273 58033283 3.0E-06 CTCTGTGGTTA 11 V_SOX8_04_M02912 TRANSFAC - 58033788 58033801 6.0E-06 CCATTCATGCCAGA 14 V_ZBTB7B_04_M02930 TRANSFAC - 58035362 58035378 4.0E-06 TCCAAGACCACCAGAGC 17 V_HIC1_03_M01073 TRANSFAC + 58035153 58035170 6.0E-06 GCGGGGTGCCGGGAGGCT 18 V_SP1_Q6_M00196 TRANSFAC - 58035291 58035303 4.0E-06 CAGGGGCGGGGCC 13 V_HNF3A_01_M01261 TRANSFAC - 58033776 58033785 7.0E-06 AAGCAAACAA 10 V_HNF3_Q6_M00791 TRANSFAC - 58033775 58033787 1.0E-06 AAAAGCAAACAAA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 58033777 58033787 1.0E-06 TGTTTGCTTTT 11 V_OCT1_04_M00138 TRANSFAC - 58035783 58035805 9.0E-06 GCAATTGTATTCAAATCAGGAAA 23 V_SP1SP3_Q4_M01219 TRANSFAC + 58034680 58034690 8.0E-06 CCGCCCCCTGC 11 V_PEBP_Q6_M00984 TRANSFAC + 58033271 58033285 1.0E-06 GCTAACCACAGAGCA 15 V_HNF4A_Q6_01_M02016 TRANSFAC - 58034938 58034952 6.0E-06 GCCCAAAGTCCAAGC 15 V_HNF4_DR1_Q3_M00764 TRANSFAC + 58034941 58034953 1.0E-05 TGGACTTTGGGCT 13 V_CTCF_01_M01200 TRANSFAC - 58034678 58034697 8.0E-06 GTCCCCGGCAGGGGGCGGCC 20 V_HNF4A_02_M02868 TRANSFAC - 58034937 58034952 4.0E-06 GCCCAAAGTCCAAGCC 16 V_TFIII_Q6_M00706 TRANSFAC + 58033428 58033436 6.0E-06 AGAGGGAGG 9 V_GLI3_01_M01596 TRANSFAC - 58033364 58033374 8.0E-06 CTGGGTGGGCT 11 V_SP4_Q5_M01273 TRANSFAC + 58035292 58035302 8.0E-06 GCCCCGCCCCT 11 V_PTF1BETA_Q6_M00657 TRANSFAC + 58032621 58032634 5.0E-06 GAGGAAATGGCAGC 14 V_TAL1_01_M01591 TRANSFAC - 58028950 58028962 4.0E-06 CATGCTTCTCTGT 13 V_OCT2_01_M01368 TRANSFAC - 58035786 58035801 2.0E-06 TTGTATTCAAATCAGG 16 V_CNOT3_01_M01253 TRANSFAC - 58034393 58034402 4.0E-06 GGCCGCGCCG 10 V_ZSCAN4_04_M02942 TRANSFAC - 58033772 58033787 4.0E-06 AAAAGCAAACAAAACA 16 V_MYOGNF1_01_M00056 TRANSFAC + 58033113 58033141 1.0E-06 AACTTCCTCACTCTGGTTCTCTCCCAGAA 29 V_HNF4_Q6_01_M01031 TRANSFAC - 58034940 58034953 7.0E-06 AGCCCAAAGTCCAA 14 V_SMAD3_03_M02794 TRANSFAC - 58035044 58035060 6.0E-06 ACATACCAGACACGACA 17 V_FPM315_01_M01587 TRANSFAC + 58034615 58034626 4.0E-06 GGGGGAGGAGCG 12 V_MECP2_02_M01299 TRANSFAC - 58034371 58034380 7.0E-06 CCGGAATAAA 10 V_NRF1_Q6_M00652 TRANSFAC + 58035186 58035195 6.0E-06 CGCGTGCGCA 10 V_FOX_Q2_M00809 TRANSFAC + 58033774 58033786 1.0E-06 TTTTGTTTGCTTT 13 V_E47_01_M00002 TRANSFAC - 58034344 58034358 1.0E-05 AGAGCAGCTGGTCGC 15 V_DMRT2_01_M01147 TRANSFAC - 58033221 58033236 8.0E-06 CAGTTTCTTACATTTT 16 V_HFH3_01_M00289 TRANSFAC + 58033774 58033786 5.0E-06 TTTTGTTTGCTTT 13 V_FOXJ2_01_M00422 TRANSFAC - 58033772 58033789 5.0E-06 GAAAAAGCAAACAAAACA 18 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 58032522 58032529 1.0E-05 TGTGGTTT 8 V_SMAD3_Q6_M00701 TRANSFAC - 58028904 58028912 6.0E-06 TGTCTGACT 9 V_DR3_Q4_M00966 TRANSFAC + 58033109 58033129 4.0E-06 GCAGAACTTCCTCACTCTGGT 21 V_SP1_Q2_01_M00933 TRANSFAC + 58032661 58032670 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 58034451 58034460 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC + 58035293 58035302 7.0E-06 CCCCGCCCCT 10 V_UF1H3BETA_Q6_M01068 TRANSFAC + 58034454 58034467 1.0E-06 GGCGGGGGACGGGC 14 V_SP1_Q4_01_M00932 TRANSFAC - 58035291 58035303 3.0E-06 CAGGGGCGGGGCC 13 V_SPIB_03_M02076 TRANSFAC + 58035494 58035503 7.0E-06 TGAGGAAGTC 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.