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LRFN2


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
57497 leucine rich repeat and fibronectin type III domain containing 2 chr6 -40554626 - 40560126 40555126

Transcription Factor Binding Sites

 
Download all TFBS in the LRFN2 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
Zfp423_MA0116.1 JASPAR + 40550831 40550845 7.0E-06 CGCCCCCAAGGGGGC 15
ZIC4_C2H2_DBD_monomeric_15_1 SELEX - 40553469 40553483 5.0E-06 GACCCCCTGCTGCTG 15
TEAD1_TEA_full_monomeric_10_1 SELEX - 40555038 40555047 3.0E-06 CACATTCCAA 10
SP1_MA0079.2 JASPAR + 40553500 40553509 3.0E-06 CCCCTCCCCC 10
ZIC3_C2H2_full_monomeric_15_1 SELEX - 40553469 40553483 4.0E-06 GACCCCCTGCTGCTG 15
NFATC1_NFAT_full_dimeric_20_1 SELEX - 40553432 40553451 6.0E-06 GGAGGAAACTGCCATTCCCT 20
MZF1_5-13_MA0057.1 JASPAR - 40553497 40553506 4.0E-06 GGAGGGGGAA 10
TEAD3_TEA_DBD_monomeric_8_1 SELEX - 40555039 40555046 1.0E-05 ACATTCCA 8
TEAD4_TEA_DBD_monomeric_10_1 SELEX - 40555038 40555047 4.0E-06 CACATTCCAA 10
ETV6_ETS_full_dimeric_15_1 SELEX + 40555632 40555646 8.0E-06 CCGGAACCGGGAGGG 15
ZIC1_C2H2_full_monomeric_14_1 SELEX - 40553470 40553483 1.0E-06 GACCCCCTGCTGCT 14
V_FOXP1_01_M00987 TRANSFAC + 40555080 40555099 5.0E-06 TTGTGTATGTGTGAGTGTAT 20
V_MTF1_Q4_M00650 TRANSFAC - 40555376 40555389 7.0E-06 GGTGCGCACGGCCG 14
V_OCT1_Q5_01_M00930 TRANSFAC + 40551634 40551644 8.0E-06 TATTTTACATT 11
V_MAF_Q6_M00648 TRANSFAC - 40555175 40555190 9.0E-06 TGGGGGGCAGTGTGCA 16
V_SP1_03_M02281 TRANSFAC + 40553500 40553509 3.0E-06 CCCCTCCCCC 10
V_SPZ1_01_M00446 TRANSFAC - 40554790 40554804 2.0E-06 GCCGGAGGGTTTAGC 15
V_GM497_04_M02864 TRANSFAC + 40555244 40555259 4.0E-06 ACACACACACACGCAC 16
V_GM497_04_M02864 TRANSFAC + 40555252 40555267 5.0E-06 ACACGCACACACACAC 16
V_SOX7_03_M02807 TRANSFAC + 40550796 40550817 8.0E-06 ATTTTAAGACAATGCATCCTCA 22
V_KROX_Q6_M00982 TRANSFAC - 40555818 40555831 1.0E-05 CCAGCCCCCACTCC 14
V_ZBP89_Q4_M01816 TRANSFAC + 40553501 40553510 4.0E-06 CCCTCCCCCA 10
V_IK1_01_M00086 TRANSFAC - 40555013 40555025 9.0E-06 TCCTGGGAATGCC 13
V_SOX18_03_M02801 TRANSFAC - 40550797 40550812 1.0E-05 ATGCATTGTCTTAAAA 16
V_CMYB_01_M00004 TRANSFAC + 40551614 40551631 2.0E-06 GCTGGCGGCGGTTGGGGG 18
V_IK3_01_M00088 TRANSFAC - 40555013 40555025 1.0E-06 TCCTGGGAATGCC 13
V_MZF1_02_M00084 TRANSFAC - 40553497 40553509 1.0E-06 GGGGGAGGGGGAA 13
V_LUN1_01_M00480 TRANSFAC + 40555018 40555034 4.0E-06 TCCCAGGAACCTCGGGC 17
V_ZSCAN4_04_M02942 TRANSFAC - 40550846 40550861 3.0E-06 CCAAGCACACATTTTT 16
V_ZFP281_01_M01597 TRANSFAC - 40553500 40553510 1.0E-06 TGGGGGAGGGG 11
V_HSF_Q6_M00641 TRANSFAC + 40553487 40553499 2.0E-06 TTCCTGAAGCTTC 13
V_HOXA10_01_M01464 TRANSFAC - 40550793 40550808 9.0E-06 ATTGTCTTAAAATTAA 16
V_HOXD10_01_M01375 TRANSFAC - 40550792 40550808 2.0E-06 ATTGTCTTAAAATTAAC 17
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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