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REXO1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 57455 REX1, RNA exonuclease 1 homolog (S. cerevisiae) chr19 - 1847952 - 1853452 1848452 Transcription Factor Binding Sites   Download all TFBS in the REXO1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 1843835 1843853 5.0E-06 CATCCACCAGGAGGAGGCA 19 CTCF_MA0139.1 JASPAR - 1848824 1848842 1.0E-06 CGTCCAGCAGAGGGCGCCT 19 CTCF_MA0139.1 JASPAR - 1851039 1851057 5.0E-06 CGGCCACCAGAGGGTGTCC 19 FOXJ2_forkhead_DBD_monomeric_8_1 SELEX + 1847788 1847795 5.0E-06 ATAAACAA 8 GABPA_MA0062.2 JASPAR + 1848262 1848272 0.0E+00 CCGGAAGTGGC 11 POU2F1_POU_DBD_dimeric_14_1 SELEX - 1848787 1848800 5.0E-06 AAATAATATGCAAA 14 NHLH1_MA0048.1 JASPAR + 1852133 1852144 1.0E-06 GCGCAGCTGCGC 12 NHLH1_MA0048.1 JASPAR - 1852133 1852144 1.0E-06 GCGCAGCTGCGC 12 LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 1848991 1849005 8.0E-06 TCATTAGACTGATGA 15 FOXL1_forkhead_full_dimeric_13_1 SELEX + 1847783 1847795 1.0E-06 TGGAAATAAACAA 13 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 1848786 1848794 2.0E-06 TATGCAAAT 9 POU2F3_POU_DBD_monomeric_9_1 SELEX - 1848786 1848794 2.0E-06 TATGCAAAT 9 EWSR1-FLI1_MA0149.1 JASPAR + 1843899 1843916 1.0E-05 AGAGGAAATGAAGGCAAG 18 EWSR1-FLI1_MA0149.1 JASPAR + 1848609 1848626 0.0E+00 GGGAGGAAGTAAGGAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 1848613 1848630 0.0E+00 GGAAGTAAGGAGGGCAGG 18 POU1F1_POU_DBD_monomeric_14_1 SELEX - 1848783 1848796 0.0E+00 AATATGCAAATGAG 14 POU2F2_POU_DBD_monomeric_11_1 SELEX - 1848785 1848795 0.0E+00 ATATGCAAATG 11 POU3F4_POU_DBD_monomeric_9_1 SELEX - 1848786 1848794 2.0E-06 TATGCAAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 1848786 1848794 2.0E-06 TATGCAAAT 9 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 1849032 1849045 8.0E-06 AACAAATATTGAGC 14 Klf4_MA0039.2 JASPAR - 1844664 1844673 5.0E-06 TGGGTGGGGC 10 RFX2_RFX_DBD_dimeric_15_1 SELEX + 1852093 1852107 0.0E+00 GGTTGCCAGGCAACG 15 RFX2_RFX_DBD_dimeric_15_1 SELEX - 1852093 1852107 5.0E-06 CGTTGCCTGGCAACC 15 POU3F3_POU_DBD_monomeric_13_1 SELEX - 1848784 1848796 0.0E+00 AATATGCAAATGA 13 Foxq1_MA0040.1 JASPAR - 1847787 1847797 8.0E-06 CCTTGTTTATT 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 1847784 1847794 3.0E-06 GGAAATAAACA 11 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 1848787 1848800 5.0E-06 AAATAATATGCAAA 14 SP1_MA0079.2 JASPAR - 1852457 1852466 3.0E-06 CCCCTCCCCC 10 POU2F3_POU_DBD_dimeric_12_1 SELEX - 1848788 1848799 7.0E-06 AATAATATGCAA 12 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 1847782 1847795 2.0E-06 ATGGAAATAAACAA 14 RFX3_RFX_DBD_dimeric_15_1 SELEX + 1852093 1852107 0.0E+00 GGTTGCCAGGCAACG 15 CTCF_C2H2_full_monomeric_17_1 SELEX + 1848825 1848841 3.0E-06 GGCGCCCTCTGCTGGAC 17 YY2_C2H2_full_monomeric_11_1 SELEX + 1848458 1848468 4.0E-06 GCCGCCATCTT 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 1847784 1847794 9.0E-06 GGAAATAAACA 11 RFX4_RFX_DBD_dimeric_15_1 SELEX + 1852093 1852107 0.0E+00 GGTTGCCAGGCAACG 15 POU3F1_POU_DBD_monomeric_12_1 SELEX - 1848784 1848795 0.0E+00 ATATGCAAATGA 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 1848788 1848799 7.0E-06 AATAATATGCAA 12 POU2F1_POU_DBD_monomeric_12_1 SELEX - 1848785 1848796 0.0E+00 AATATGCAAATG 12 Foxj3_forkhead_DBD_monomeric_8_1 SELEX + 1847788 1847795 5.0E-06 ATAAACAA 8 POU3F3_POU_DBD_dimeric_12_1 SELEX - 1848788 1848799 7.0E-06 AATAATATGCAA 12 POU3F2_POU_DBD_monomeric_12_1 SELEX - 1848784 1848795 0.0E+00 ATATGCAAATGA 12 ELF5_MA0136.1 JASPAR + 1848796 1848804 2.0E-06 TATTTCCTT 9 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 1847782 1847794 3.0E-06 ATGGAAATAAACA 13 NHLH1_bHLH_full_dimeric_10_1 SELEX + 1852134 1852143 2.0E-06 CGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 1852134 1852143 2.0E-06 CGCAGCTGCG 10 V_MINI20_B_M00324 TRANSFAC + 1847828 1847848 9.0E-06 GGCGGGCGCCAATCAGGGGCA 21 V_FREAC7_01_M00293 TRANSFAC + 1847783 1847798 7.0E-06 TGGAAATAAACAAGGG 16 V_POU3F3_01_M03090 TRANSFAC + 1848783 1848799 5.0E-06 CTCATTTGCATATTATT 17 V_ZFP410_04_M02936 TRANSFAC - 1847838 1847854 5.0E-06 TCCTCCTGCCCCTGATT 17 V_YY1_02_M00069 TRANSFAC + 1848456 1848475 3.0E-06 CCGCCGCCATCTTGCTCCGA 20 V_SREBP2_Q6_M01177 TRANSFAC - 1848857 1848868 3.0E-06 AGGCCACCTCCC 12 V_MMEF2_Q6_M00405 TRANSFAC + 1848915 1848930 0.0E+00 GTCTTTAAAAATCCCC 16 V_OCT1_Q5_01_M00930 TRANSFAC + 1848784 1848794 1.0E-06 TCATTTGCATA 11 V_OCTAMER_01_M01324 TRANSFAC + 1848783 1848799 5.0E-06 CTCATTTGCATATTATT 17 V_OCT1_01_M00135 TRANSFAC - 1848781 1848799 1.0E-06 AATAATATGCAAATGAGTA 19 V_POU2F3_01_M01476 TRANSFAC - 1848782 1848797 0.0E+00 TAATATGCAAATGAGT 16 V_YY1_Q6_M00793 TRANSFAC + 1848461 1848469 7.0E-06 GCCATCTTG 9 V_YY1_Q6_M00793 TRANSFAC + 1848700 1848708 7.0E-06 GCCATCTTG 9 V_SP1_03_M02281 TRANSFAC - 1852457 1852466 3.0E-06 CCCCTCCCCC 10 V_STAT6_01_M00494 TRANSFAC - 1847783 1847790 7.0E-06 TATTTCCA 8 V_AP2_Q6_M00189 TRANSFAC + 1852064 1852075 7.0E-06 CGCCCCCGGGCG 12 V_OCT_C_M00210 TRANSFAC + 1848783 1848795 0.0E+00 CTCATTTGCATAT 13 V_HEN1_01_M00068 TRANSFAC + 1852128 1852149 3.0E-06 GGGGGGCGCAGCTGCGCCAGGC 22 V_HEN1_01_M00068 TRANSFAC - 1852128 1852149 1.0E-06 GCCTGGCGCAGCTGCGCCCCCC 22 V_PU1_Q4_M01172 TRANSFAC + 1847648 1847666 9.0E-06 AGCTTTGACTTCCTCCCTG 19 V_NFAT2_01_M01748 TRANSFAC + 1847782 1847790 6.0E-06 ATGGAAATA 9 V_FOXP3_01_M01599 TRANSFAC + 1847788 1847795 5.0E-06 ATAAACAA 8 V_ZNF219_01_M01122 TRANSFAC + 1852023 1852034 8.0E-06 CTCCCCCATCCC 12 V_ZNF219_01_M01122 TRANSFAC - 1852124 1852135 5.0E-06 CGCCCCCCGCCC 12 V_OCT1_02_M00136 TRANSFAC - 1848785 1848799 1.0E-06 AATAATATGCAAATG 15 V_E2F1_01_M01250 TRANSFAC - 1847540 1847547 1.0E-05 CGTTTCTT 8 V_E2F1_01_M01250 TRANSFAC - 1848956 1848963 1.0E-05 CGTTTCTT 8 V_RFX1_01_M00280 TRANSFAC + 1852092 1852108 4.0E-06 CGGTTGCCAGGCAACGG 17 V_RFX1_01_M00280 TRANSFAC - 1852092 1852108 4.0E-06 CCGTTGCCTGGCAACCG 17 V_AMEF2_Q6_M00403 TRANSFAC + 1848915 1848932 1.0E-06 GTCTTTAAAAATCCCCTC 18 V_HNF3_Q6_M00791 TRANSFAC + 1849029 1849041 8.0E-06 TTCAACAAATATT 13 V_OCT1_05_M00161 TRANSFAC + 1848783 1848796 0.0E+00 CTCATTTGCATATT 14 V_TATA_C_M00216 TRANSFAC + 1848916 1848925 3.0E-06 TCTTTAAAAA 10 V_YY1_Q6_02_M01035 TRANSFAC + 1848458 1848468 7.0E-06 GCCGCCATCTT 11 V_OCT1_04_M00138 TRANSFAC - 1848779 1848801 0.0E+00 GAAATAATATGCAAATGAGTAAT 23 V_REX1_03_M01744 TRANSFAC - 1848457 1848468 1.0E-06 AAGATGGCGGCG 12 V_HFH1_01_M00129 TRANSFAC - 1847786 1847797 2.0E-06 CCTTGTTTATTT 12 V_CTCF_02_M01259 TRANSFAC - 1848826 1848845 1.0E-06 CCTCGTCCAGCAGAGGGCGC 20 V_CTCF_02_M01259 TRANSFAC - 1851041 1851060 6.0E-06 CCACGGCCACCAGAGGGTGT 20 V_CTCF_01_M01200 TRANSFAC - 1848824 1848843 1.0E-06 TCGTCCAGCAGAGGGCGCCT 20 V_CTCF_01_M01200 TRANSFAC - 1851039 1851058 4.0E-06 ACGGCCACCAGAGGGTGTCC 20 V_OCT1_B_M00342 TRANSFAC - 1848785 1848794 2.0E-06 TATGCAAATG 10 V_OCT_Q6_M00795 TRANSFAC + 1848784 1848794 0.0E+00 TCATTTGCATA 11 V_CETS1P54_03_M01078 TRANSFAC + 1848258 1848273 9.0E-06 GGTGCCGGAAGTGGCA 16 V_SP4_Q5_M01273 TRANSFAC - 1852457 1852467 5.0E-06 GCCCCTCCCCC 11 V_HFH8_01_M00294 TRANSFAC - 1847785 1847797 4.0E-06 CCTTGTTTATTTC 13 V_YY1_03_M02044 TRANSFAC + 1848458 1848469 1.0E-06 GCCGCCATCTTG 12 V_YY1_03_M02044 TRANSFAC + 1848697 1848708 3.0E-06 GGCGCCATCTTG 12 V_MINI19_B_M00323 TRANSFAC + 1847828 1847848 2.0E-06 GGCGGGCGCCAATCAGGGGCA 21 V_SOX15_03_M02799 TRANSFAC - 1849019 1849035 6.0E-06 TGTTGAACAAATGAGTG 17 V_GABPBETA_Q3_M01876 TRANSFAC + 1843899 1843909 8.0E-06 AGAGGAAATGA 11 V_MYF6_04_M02885 TRANSFAC + 1844657 1844671 3.0E-06 GCCAACAGCCCCACC 15 V_OCT2_01_M01368 TRANSFAC - 1848782 1848797 0.0E+00 TAATATGCAAATGAGT 16 V_CNOT3_01_M01253 TRANSFAC + 1847876 1847885 8.0E-06 GGCCGCGCCC 10 V_OCT1_Q6_M00195 TRANSFAC - 1848783 1848797 1.0E-06 TAATATGCAAATGAG 15 V_HEN1_02_M00058 TRANSFAC + 1852128 1852149 1.0E-06 GGGGGGCGCAGCTGCGCCAGGC 22 V_HEN1_02_M00058 TRANSFAC - 1852128 1852149 1.0E-06 GCCTGGCGCAGCTGCGCCCCCC 22 V_DELTAEF1_01_M00073 TRANSFAC + 1848814 1848824 2.0E-06 TATCACCTTAA 11 V_E2F6_01_M01252 TRANSFAC - 1847540 1847547 1.0E-05 CGTTTCTT 8 V_E2F6_01_M01252 TRANSFAC - 1848956 1848963 1.0E-05 CGTTTCTT 8 V_MEIS1_01_M00419 TRANSFAC - 1852075 1852086 5.0E-06 CAGTGACAGGGC 12 V_FOXO3_01_M00477 TRANSFAC - 1847785 1847798 9.0E-06 CCCTTGTTTATTTC 14 V_FOX_Q2_M00809 TRANSFAC - 1849030 1849042 8.0E-06 CAATATTTGTTGA 13 V_ZFP281_01_M01597 TRANSFAC + 1852456 1852466 7.0E-06 CGGGGGAGGGG 11 V_EWSR1FLI1_01_M02252 TRANSFAC + 1843899 1843916 1.0E-05 AGAGGAAATGAAGGCAAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 1848609 1848626 0.0E+00 GGGAGGAAGTAAGGAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 1848613 1848630 0.0E+00 GGAAGTAAGGAGGGCAGG 18 V_FOXJ2_01_M00422 TRANSFAC + 1849027 1849044 1.0E-05 TGTTCAACAAATATTGAG 18 V_EFC_Q6_M00626 TRANSFAC - 1848787 1848800 1.0E-06 AAATAATATGCAAA 14 V_EFC_Q6_M00626 TRANSFAC - 1852094 1852107 6.0E-06 CGTTGCCTGGCAAC 14 V_IPF1_Q4_01_M01013 TRANSFAC - 1848995 1849009 8.0E-06 CTGGTCATTAGACTG 15 V_FOXO1_01_M00473 TRANSFAC + 1847787 1847796 1.0E-06 AATAAACAAG 10 V_HNF3B_Q6_M02014 TRANSFAC - 1847787 1847795 6.0E-06 TTGTTTATT 9 V_MEF2_01_M00006 TRANSFAC + 1848917 1848932 3.0E-06 CTTTAAAAATCCCCTC 16 V_UF1H3BETA_Q6_M01068 TRANSFAC + 1852454 1852467 0.0E+00 GGCGGGGGAGGGGC 14 V_HMEF2_Q6_M00406 TRANSFAC + 1848917 1848932 2.0E-06 CTTTAAAAATCCCCTC 16 V_ELF5_04_M02241 TRANSFAC + 1848796 1848804 2.0E-06 TATTTCCTT 9 V_HOXA10_01_M01464 TRANSFAC - 1848789 1848804 4.0E-06 AAGGAAATAATATGCA 16 V_EHF_07_M02849 TRANSFAC + 1848793 1848808 9.0E-06 TATTATTTCCTTTCGT 16 V_TAACC_B_M00331 TRANSFAC + 1847787 1847809 5.0E-06 AATAAACAAGGGCGGCCACAAGC 23 V_MIF1_01_M00279 TRANSFAC + 1852092 1852109 2.0E-06 CGGTTGCCAGGCAACGGG 18 V_SPI1_02_M02043 TRANSFAC - 1848796 1848805 8.0E-06 AAAGGAAATA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.