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LRTM1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 57408 leucine-rich repeats and transmembrane domains 1 chr3 - 54961572 - 54967072 54962072 Transcription Factor Binding Sites   Download all TFBS in the LRTM1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 54962323 54962338 9.0E-06 TTGATTATTTAATCTG 16 TBX21_TBX_full_dimeric_16_1 SELEX - 54960583 54960598 1.0E-05 AGTGTTATGTAAAACA 16 HSFY2_HSF_DBD_dimer-of-dimers_15_1 SELEX - 54966923 54966937 5.0E-06 TTCTAACCAAACGAA 15 POU2F1_POU_DBD_dimeric_14_1 SELEX + 54962322 54962335 9.0E-06 TTTGATTATTTAAT 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 54962322 54962335 1.0E-06 ATTAAATAATCAAA 14 NHLH1_MA0048.1 JASPAR + 54962690 54962701 7.0E-06 TCTCAGCTGCTT 12 ESR2_MA0258.1 JASPAR + 54962608 54962625 3.0E-06 CAGGGTCTTGATGCCCTG 18 FOXL1_forkhead_full_dimeric_13_1 SELEX - 54962323 54962335 1.0E-06 ATTAAATAATCAA 13 HLF_bZIP_full_dimeric_12_1 SELEX + 54960585 54960596 1.0E-05 TTTTACATAACA 12 EWSR1-FLI1_MA0149.1 JASPAR - 54965478 54965495 4.0E-06 GGGAGGGAGGGAGAAAGA 18 GATA5_GATA_DBD_monomeric_8_1 SELEX - 54960453 54960460 7.0E-06 AGATAAGA 8 GATA5_GATA_DBD_monomeric_8_1 SELEX - 54960501 54960508 7.0E-06 AGATAAGA 8 SOX15_HMG_full_dimeric_15_3 SELEX - 54962256 54962270 6.0E-06 TTGACAAACATTCTT 15 GATA4_GATA_DBD_monomeric_8_1 SELEX - 54960453 54960460 7.0E-06 AGATAAGA 8 GATA4_GATA_DBD_monomeric_8_1 SELEX - 54960501 54960508 7.0E-06 AGATAAGA 8 SPIB_ETS_DBD_monomeric_14_1 SELEX + 54965538 54965551 2.0E-06 AAAAAGAGGAACCA 14 POU4F3_POU_DBD_monomeric_16_1 SELEX + 54962323 54962338 9.0E-06 TTGATTATTTAATCTG 16 LEF1_HMG_DBD_monomeric_15_1 SELEX + 54965425 54965439 6.0E-06 AGAGAACAAAGGGAG 15 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 54962322 54962335 8.0E-06 ATTAAATAATCAAA 14 POU2F3_POU_DBD_dimeric_12_1 SELEX + 54962323 54962334 6.0E-06 TTGATTATTTAA 12 POU2F3_POU_DBD_dimeric_12_1 SELEX - 54962323 54962334 2.0E-06 TTAAATAATCAA 12 SOX9_HMG_full_dimeric_16_3 SELEX - 54962618 54962633 5.0E-06 ATGAATTTCAGGGCAT 16 Lhx3_MA0135.1 JASPAR - 54962325 54962337 1.0E-06 AGATTAAATAATC 13 SOX14_HMG_DBD_dimeric_15_1 SELEX - 54962256 54962270 6.0E-06 TTGACAAACATTCTT 15 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 54962324 54962334 5.0E-06 TTAAATAATCA 11 Gata1_MA0035.2 JASPAR - 54960452 54960462 8.0E-06 GTAGATAAGAA 11 Gata1_MA0035.2 JASPAR - 54960500 54960510 8.0E-06 GTAGATAAGAA 11 GATA3_GATA_full_monomeric_8_1 SELEX - 54960453 54960460 7.0E-06 AGATAAGA 8 GATA3_GATA_full_monomeric_8_1 SELEX - 54960501 54960508 7.0E-06 AGATAAGA 8 POU1F1_POU_DBD_monomeric_17_1 SELEX + 54962320 54962336 4.0E-06 TTTTTGATTATTTAATC 17 GSC_homeodomain_full_monomeric_10_1 SELEX - 54962590 54962599 8.0E-06 GCTAATCCCC 10 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 54962323 54962334 1.0E-05 TTGATTATTTAA 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 54962323 54962334 5.0E-06 TTAAATAATCAA 12 Pou5f1_MA0142.1 JASPAR - 54961003 54961017 7.0E-06 TTTTGAAATTCAAGT 15 SPI1_ETS_full_monomeric_14_1 SELEX + 54965538 54965551 1.0E-06 AAAAAGAGGAACCA 14 POU3F3_POU_DBD_dimeric_12_1 SELEX + 54962323 54962334 3.0E-06 TTGATTATTTAA 12 POU3F3_POU_DBD_dimeric_12_1 SELEX - 54962323 54962334 1.0E-06 TTAAATAATCAA 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 54962324 54962336 5.0E-06 GATTAAATAATCA 13 ONECUT3_CUT_DBD_monomeric_14_1 SELEX - 54962319 54962332 4.0E-06 AAATAATCAAAAAG 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 54962321 54962334 5.0E-06 TTAAATAATCAAAA 14 IRX5_homeodomain_DBD_dimeric_12_1 SELEX + 54960587 54960598 7.0E-06 TTACATAACACT 12 V_FOXP1_01_M00987 TRANSFAC - 54960531 54960550 5.0E-06 GTGTGTGTGTGTGTGTGTAT 20 V_HNF3B_01_M00131 TRANSFAC + 54962323 54962337 5.0E-06 TTGATTATTTAATCT 15 V_SPI1_01_M01203 TRANSFAC + 54965538 54965554 1.0E-06 AAAAAGAGGAACCAAGG 17 V_TGIF_01_M00418 TRANSFAC - 54966858 54966868 1.0E-06 AGCTGTCACTA 11 V_OSF2_Q6_M00731 TRANSFAC + 54966902 54966909 1.0E-05 ACCACAAA 8 V_GATA2_02_M00348 TRANSFAC - 54960453 54960462 8.0E-06 GTAGATAAGA 10 V_GATA2_02_M00348 TRANSFAC - 54960501 54960510 8.0E-06 GTAGATAAGA 10 V_YY1_02_M00069 TRANSFAC + 54957641 54957660 6.0E-06 GCACTGCCATCTTCTCAGTG 20 V_FOXD3_01_M00130 TRANSFAC + 54962325 54962336 6.0E-06 GATTATTTAATC 12 V_POU5F1_02_M02245 TRANSFAC - 54961003 54961017 7.0E-06 TTTTGAAATTCAAGT 15 V_OCT1_Q5_01_M00930 TRANSFAC + 54960583 54960593 7.0E-06 TGTTTTACATA 11 V_POU2F3_01_M01476 TRANSFAC + 54965450 54965465 5.0E-06 ATGCATGCTAATGCTA 16 V_HNF3_Q6_01_M01012 TRANSFAC + 54962323 54962340 4.0E-06 TTGATTATTTAATCTGCT 18 V_GATA_C_M00203 TRANSFAC - 54960450 54960460 0.0E+00 AGATAAGAACT 11 V_GATA_C_M00203 TRANSFAC - 54960498 54960508 0.0E+00 AGATAAGAACT 11 V_HFH4_01_M00742 TRANSFAC + 54962321 54962333 4.0E-06 TTTTGATTATTTA 13 V_PU1_Q4_M01172 TRANSFAC + 54960979 54960997 3.0E-06 AACACTCCCTTCTTTTTTT 19 V_PU1_Q4_M01172 TRANSFAC - 54965539 54965557 1.0E-06 TCTCCTTGGTTCCTCTTTT 19 V_ZFP281_05_M02935 TRANSFAC - 54965321 54965337 0.0E+00 TTTTAACCCCCAATTGG 17 V_TCFAP2E_04_M02926 TRANSFAC - 54960991 54961004 2.0E-06 GTCTCAAAAAAAAA 14 V_ELF4_04_M02850 TRANSFAC - 54960987 54961003 5.0E-06 TCTCAAAAAAAAAGAAG 17 V_ELF4_04_M02850 TRANSFAC - 54960988 54961004 7.0E-06 GTCTCAAAAAAAAAGAA 17 V_TST1_01_M00133 TRANSFAC - 54962565 54962579 3.0E-06 GCTGAATAAGACTTC 15 V_DBP_Q6_01_M01872 TRANSFAC - 54960587 54960594 5.0E-06 TTATGTAA 8 V_ZFP105_03_M02827 TRANSFAC - 54960988 54961002 1.0E-06 CTCAAAAAAAAAGAA 15 V_ZFP105_03_M02827 TRANSFAC - 54962317 54962331 8.0E-06 AATAATCAAAAAGGC 15 V_OBOX2_01_M01364 TRANSFAC + 54962586 54962602 8.0E-06 CTGTGGGGATTAGCTGT 17 V_REST_01_M01256 TRANSFAC - 54965545 54965566 7.0E-06 TTCAGCATCTCTCCTTGGTTCC 22 V_PITX3_01_M01343 TRANSFAC + 54962588 54962603 1.0E-06 GTGGGGATTAGCTGTG 16 V_SPIB_01_M01204 TRANSFAC + 54965538 54965554 2.0E-06 AAAAAGAGGAACCAAGG 17 V_CRX_02_M01436 TRANSFAC + 54962586 54962601 1.0E-06 CTGTGGGGATTAGCTG 16 V_GATA1_09_M02254 TRANSFAC - 54960452 54960462 8.0E-06 GTAGATAAGAA 11 V_GATA1_09_M02254 TRANSFAC - 54960500 54960510 8.0E-06 GTAGATAAGAA 11 V_SOX11_03_M02795 TRANSFAC + 54965424 54965440 7.0E-06 AAGAGAACAAAGGGAGG 17 V_OCT_Q6_M00795 TRANSFAC + 54960583 54960593 9.0E-06 TGTTTTACATA 11 V_LIM1_01_M01418 TRANSFAC - 54962322 54962338 8.0E-06 CAGATTAAATAATCAAA 17 V_GATA4_Q3_M00632 TRANSFAC - 54960984 54960995 8.0E-06 AAAAAGAAGGGA 12 V_GATA4_Q3_M00632 TRANSFAC + 54965427 54965438 7.0E-06 AGAACAAAGGGA 12 V_OTX2_Q3_M01719 TRANSFAC - 54962329 54962341 1.0E-05 AAGCAGATTAAAT 13 V_MTF1_06_M02882 TRANSFAC - 54962319 54962332 2.0E-06 AAATAATCAAAAAG 14 V_OBOX2_02_M03064 TRANSFAC + 54962586 54962602 8.0E-06 CTGTGGGGATTAGCTGT 17 V_MRG2_01_M01395 TRANSFAC + 54960518 54960533 9.0E-06 CACTGCCTGTCAAATA 16 V_PKNOX2_01_M01411 TRANSFAC + 54960518 54960533 7.0E-06 CACTGCCTGTCAAATA 16 V_PKNOX2_01_M01411 TRANSFAC - 54966857 54966872 6.0E-06 CTGCAGCTGTCACTAG 16 V_SIRT6_01_M01797 TRANSFAC - 54960453 54960460 7.0E-06 AGATAAGA 8 V_SIRT6_01_M01797 TRANSFAC - 54960501 54960508 7.0E-06 AGATAAGA 8 V_PITX1_01_M01484 TRANSFAC + 54962586 54962602 1.0E-05 CTGTGGGGATTAGCTGT 17 V_PLZF_02_M01075 TRANSFAC + 54965321 54965349 4.0E-06 CCAATTGGGGGTTAAAAGATGGACAATGC 29 V_SRF_06_M02916 TRANSFAC - 54960987 54961003 8.0E-06 TCTCAAAAAAAAAGAAG 17 V_SRF_06_M02916 TRANSFAC - 54960988 54961004 2.0E-06 GTCTCAAAAAAAAAGAA 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 54965478 54965495 4.0E-06 GGGAGGGAGGGAGAAAGA 18 V_MEF2_01_M00006 TRANSFAC + 54962676 54962691 4.0E-06 TGCCACAAATAACTTC 16 V_GATA6_04_M02757 TRANSFAC - 54960449 54960465 2.0E-06 ACAGTAGATAAGAACTC 17 V_GATA6_04_M02757 TRANSFAC - 54960497 54960513 2.0E-06 ACAGTAGATAAGAACTC 17 V_P300_01_M00033 TRANSFAC - 54960977 54960990 9.0E-06 GAAGGGAGTGTTAC 14 V_OBOX5_01_M01381 TRANSFAC - 54962326 54962342 8.0E-06 CAAGCAGATTAAATAAT 17 V_OBOX3_02_M03065 TRANSFAC + 54962586 54962602 8.0E-06 CTGTGGGGATTAGCTGT 17 V_OTX1_01_M01366 TRANSFAC + 54962587 54962603 7.0E-06 TGTGGGGATTAGCTGTG 17 V_OBOX6_06_M03067 TRANSFAC + 54962326 54962342 8.0E-06 ATTATTTAATCTGCTTG 17 V_OBOX3_01_M01466 TRANSFAC + 54962586 54962602 8.0E-06 CTGTGGGGATTAGCTGT 17 V_SMAD1_01_M01590 TRANSFAC + 54965426 54965437 1.0E-05 GAGAACAAAGGG 12 V_SOX9_Q4_M01284 TRANSFAC + 54965428 54965438 3.0E-06 GAACAAAGGGA 11 V_ESR2_01_M02377 TRANSFAC + 54962608 54962625 3.0E-06 CAGGGTCTTGATGCCCTG 18 V_OCT4_01_M01125 TRANSFAC - 54960585 54960599 4.0E-06 AAGTGTTATGTAAAA 15 V_OCT4_01_M01125 TRANSFAC - 54961003 54961017 3.0E-06 TTTTGAAATTCAAGT 15 V_TCF11_01_M00285 TRANSFAC - 54962292 54962304 8.0E-06 GTCATGTTTGAAT 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.