Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ABHD6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 57406 abhydrolase domain containing 6 chr3 + 58218258 - 58223758 58223258 Transcription Factor Binding Sites   Download all TFBS in the ABHD6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 58220570 58220580 4.0E-06 AATGACTCATA 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 58220570 58220580 8.0E-06 TATGAGTCATT 11 NKX2-8_homeodomain_full_monomeric_9_1 SELEX + 58224205 58224213 8.0E-06 ACACTTGAA 9 PITX3_homeodomain_DBD_monomeric_9_1 SELEX + 58221802 58221810 1.0E-05 TTTAATCCC 9 SRY_HMG_DBD_dimeric_13_2 SELEX + 58221793 58221805 3.0E-06 TGAAGGACATTTA 13 POU3F4_POU_DBD_monomeric_11_1 SELEX + 58221938 58221948 4.0E-06 TGAATAAATTG 11 TBP_MA0108.2 JASPAR - 58218452 58218466 5.0E-06 ATATAAAAAGAGCCT 15 HLF_bZIP_full_dimeric_12_1 SELEX - 58224302 58224313 1.0E-05 CGTTACACAATC 12 GLI2_C2H2_DBD_monomeric_14_1 SELEX + 58224052 58224065 9.0E-06 GCCCACCCAGATAG 14 Pax4_MA0068.1 JASPAR + 58218484 58218513 9.0E-06 GGAAATAATAGCTTACTCACTACCCCATCC 30 SP1_MA0079.2 JASPAR - 58223205 58223214 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 58223211 58223220 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 58223217 58223226 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR + 58224125 58224134 3.0E-06 CCCCTCCCCC 10 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 58223701 58223716 8.0E-06 GAGGTCACGGGGCCAT 16 PITX1_homeodomain_full_monomeric_9_1 SELEX + 58221802 58221810 4.0E-06 TTTAATCCC 9 FEV_MA0156.1 JASPAR - 58223860 58223867 1.0E-05 CAGGAAAT 8 JDP2_bZIP_full_dimeric_9_1 SELEX + 58220571 58220579 2.0E-06 ATGACTCAT 9 JDP2_bZIP_full_dimeric_9_1 SELEX - 58220571 58220579 4.0E-06 ATGAGTCAT 9 HLF_MA0043.1 JASPAR - 58224302 58224313 2.0E-06 CGTTACACAATC 12 IRF3_IRF_full_trimeric_21_1 SELEX - 58224139 58224159 3.0E-06 GGGAAAGGGAAGCTGAAAGGC 21 V_KLF15_Q2_M01714 TRANSFAC - 58224120 58224133 3.0E-06 GGGGAGGGGAGTAG 14 V_AP1_Q2_M00173 TRANSFAC + 58220570 58220580 6.0E-06 AATGACTCATA 11 V_STAT3_01_M00225 TRANSFAC + 58221963 58221983 8.0E-06 GGGCCATTCCCTGAAGTGAAT 21 V_APOLYA_B_M00310 TRANSFAC + 58221940 58221954 6.0E-06 AATAAATTGCCACTG 15 V_OBOX5_05_M03066 TRANSFAC - 58221798 58221814 0.0E+00 TGTGGGGATTAAATGTC 17 V_OBOX1_01_M01450 TRANSFAC - 58221799 58221815 2.0E-06 ATGTGGGGATTAAATGT 17 V_MAFB_05_M02775 TRANSFAC + 58220658 58220674 4.0E-06 CCATGTGCTGACATGGC 17 V_ETS_B_M00340 TRANSFAC + 58218421 58218434 8.0E-06 AAGAGGAAGCAAGA 14 V_FOXJ2_02_M00423 TRANSFAC + 58218485 58218498 8.0E-06 GAAATAATAGCTTA 14 V_SP1_Q6_01_M00931 TRANSFAC + 58223195 58223204 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 58223454 58223463 4.0E-06 GGGGCGGGGC 10 V_EGR_Q6_M00807 TRANSFAC - 58223803 58223813 6.0E-06 GTGGGGGCAGC 11 V_IRF_Q6_01_M00972 TRANSFAC + 58223086 58223096 7.0E-06 GTAAGTGAAAC 11 V_POU1F1_Q6_M00744 TRANSFAC + 58221937 58221946 8.0E-06 GTGAATAAAT 10 V_SP1_03_M02281 TRANSFAC - 58223205 58223214 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 58223211 58223220 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 58223217 58223226 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC + 58224125 58224134 3.0E-06 CCCCTCCCCC 10 V_TR4_Q2_M01725 TRANSFAC + 58223708 58223718 6.0E-06 CGTGACCTCTC 11 V_SP1_02_M01303 TRANSFAC + 58223200 58223210 8.0E-06 GGGGCGGGGGC 11 V_SP1_02_M01303 TRANSFAC + 58223206 58223216 8.0E-06 GGGGCGGGGGC 11 V_SP1_02_M01303 TRANSFAC + 58223212 58223222 8.0E-06 GGGGCGGGGGC 11 V_SP1_02_M01303 TRANSFAC + 58223218 58223228 8.0E-06 GGGGCGGGGGC 11 V_COUPTF_Q6_M01036 TRANSFAC - 58218395 58218417 6.0E-06 CCGTGTGATCTCTACACTTGCAT 23 V_COUPTF_Q6_M01036 TRANSFAC + 58224174 58224196 7.0E-06 TCCCGTGCCCTTGCGCCCCTTCC 23 V_PU1_Q4_M01172 TRANSFAC - 58218419 58218437 0.0E+00 CTCTCTTGCTTCCTCTTCT 19 V_HNF1_C_M00206 TRANSFAC + 58228214 58228230 6.0E-06 TGTTGATTCATGACTTC 17 V_PPARGRXRA_01_M02262 TRANSFAC - 58223710 58223724 0.0E+00 CTGGGGGAGAGGTCA 15 V_AP1_Q6_M00174 TRANSFAC + 58220570 58220580 5.0E-06 AATGACTCATA 11 V_WT1_Q6_01_M02036 TRANSFAC - 58223202 58223211 4.0E-06 CGCCCCCGCC 10 V_WT1_Q6_01_M02036 TRANSFAC - 58223208 58223217 4.0E-06 CGCCCCCGCC 10 V_WT1_Q6_01_M02036 TRANSFAC - 58223214 58223223 4.0E-06 CGCCCCCGCC 10 V_WT1_Q6_01_M02036 TRANSFAC - 58223220 58223229 4.0E-06 CGCCCCCGCC 10 V_BACH1_01_M00495 TRANSFAC - 58220568 58220582 4.0E-06 CTTATGAGTCATTCG 15 V_OBOX5_02_M01480 TRANSFAC - 58221798 58221814 0.0E+00 TGTGGGGATTAAATGTC 17 V_TATA_01_M00252 TRANSFAC - 58218452 58218466 5.0E-06 ATATAAAAAGAGCCT 15 V_KROX_Q6_M00982 TRANSFAC - 58223200 58223213 0.0E+00 CCCGCCCCCGCCCC 14 V_KROX_Q6_M00982 TRANSFAC - 58223206 58223219 0.0E+00 CCCGCCCCCGCCCC 14 V_KROX_Q6_M00982 TRANSFAC - 58223212 58223225 0.0E+00 CCCGCCCCCGCCCC 14 V_KROX_Q6_M00982 TRANSFAC - 58223218 58223231 0.0E+00 CCCGCCCCCGCCCC 14 V_ZBP89_Q4_M01816 TRANSFAC + 58224126 58224135 4.0E-06 CCCTCCCCCA 10 V_AP1_Q6_01_M00925 TRANSFAC + 58220571 58220579 4.0E-06 ATGACTCAT 9 V_SP1_Q6_M00196 TRANSFAC + 58223193 58223205 7.0E-06 GCGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC + 58223204 58223216 9.0E-06 CGGGGGCGGGGGC 13 V_SP1_Q6_M00196 TRANSFAC + 58223210 58223222 9.0E-06 CGGGGGCGGGGGC 13 V_SP1_Q6_M00196 TRANSFAC + 58223216 58223228 9.0E-06 CGGGGGCGGGGGC 13 V_SP1_Q6_M00196 TRANSFAC - 58223244 58223256 9.0E-06 CGGGGGCGGAGCC 13 V_MAZ_Q6_01_M02023 TRANSFAC - 58224121 58224134 1.0E-06 GGGGGAGGGGAGTA 14 V_EGR1_Q6_M01873 TRANSFAC + 58223209 58223218 4.0E-06 GCGGGGGCGG 10 V_EGR1_Q6_M01873 TRANSFAC + 58223215 58223224 4.0E-06 GCGGGGGCGG 10 V_EGR1_Q6_M01873 TRANSFAC + 58223221 58223230 4.0E-06 GCGGGGGCGG 10 V_IRF_Q6_M00772 TRANSFAC - 58223086 58223100 8.0E-06 CACTGTTTCACTTAC 15 V_OBOX2_01_M01364 TRANSFAC - 58221799 58221815 0.0E+00 ATGTGGGGATTAAATGT 17 V_MATH1_Q2_M01716 TRANSFAC + 58220597 58220606 3.0E-06 CCAGCTGGTG 10 V_JUNDM2_04_M02876 TRANSFAC + 58220567 58220582 4.0E-06 ACGAATGACTCATAAG 16 V_PITX3_01_M01343 TRANSFAC - 58221798 58221813 9.0E-06 GTGGGGATTAAATGTC 16 V_AP1_C_M00199 TRANSFAC - 58220571 58220579 8.0E-06 ATGAGTCAT 9 V_MEF2_Q6_01_M00941 TRANSFAC + 58218453 58218464 7.0E-06 GGCTCTTTTTAT 12 V_AP1_01_M00517 TRANSFAC + 58220569 58220581 2.0E-06 GAATGACTCATAA 13 V_TBP_06_M02814 TRANSFAC + 58218456 58218471 2.0E-06 TCTTTTTATATACCAA 16 V_TBP_06_M02814 TRANSFAC - 58218456 58218471 7.0E-06 TTGGTATATAAAAAGA 16 V_EVI1_06_M00011 TRANSFAC - 58220621 58220629 9.0E-06 ACAAGATAC 9 V_ELK1_01_M00007 TRANSFAC + 58218419 58218434 7.0E-06 AGAAGAGGAAGCAAGA 16 V_ZFP691_04_M02937 TRANSFAC - 58223502 58223518 7.0E-06 AGCTGGACTCCTTAAAG 17 V_SP4_Q5_M01273 TRANSFAC - 58223189 58223199 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 58223194 58223204 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 58223199 58223209 7.0E-06 CCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 58223205 58223215 5.0E-06 CCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 58223211 58223221 5.0E-06 CCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 58223217 58223227 5.0E-06 CCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 58223453 58223463 2.0E-06 GCCCCGCCCCG 11 V_ELF1_Q6_M00746 TRANSFAC + 58218419 58218430 7.0E-06 AGAAGAGGAAGC 12 V_AP1_Q4_01_M00926 TRANSFAC - 58220571 58220578 1.0E-05 TGAGTCAT 8 V_OBOX2_02_M03064 TRANSFAC - 58221799 58221815 0.0E+00 ATGTGGGGATTAAATGT 17 V_SMAD4_04_M02898 TRANSFAC - 58223035 58223051 6.0E-06 TTAAACCCGCCAAAGTG 17 V_PITX1_01_M01484 TRANSFAC - 58221799 58221815 2.0E-06 ATGTGGGGATTAAATGT 17 V_XBP1_01_M00251 TRANSFAC + 58222920 58222936 1.0E-05 AGGATTACGTGAGACAA 17 V_TFIIA_Q6_M00707 TRANSFAC - 58218364 58218375 8.0E-06 TATGAGAGGAAG 12 V_NKX22_01_M00485 TRANSFAC - 58224203 58224212 7.0E-06 TCAAGTGTTT 10 V_FRA1_Q5_M01267 TRANSFAC - 58220571 58220578 1.0E-05 TGAGTCAT 8 V_DOBOX5_01_M01463 TRANSFAC - 58221798 58221814 1.0E-06 TGTGGGGATTAAATGTC 17 V_OTX2_01_M01387 TRANSFAC - 58221798 58221814 0.0E+00 TGTGGGGATTAAATGTC 17 V_PITX2_Q2_M00482 TRANSFAC + 58221802 58221812 5.0E-06 TTTAATCCCCA 11 V_ZFP281_01_M01597 TRANSFAC - 58224125 58224135 1.0E-06 TGGGGGAGGGG 11 V_IRF1_Q6_01_M01881 TRANSFAC - 58223085 58223098 6.0E-06 CTGTTTCACTTACT 14 V_P63_01_M01656 TRANSFAC + 58223905 58223924 1.0E-05 GGACGGGTCGGGACCTGCAC 20 V_P63_01_M01656 TRANSFAC - 58223905 58223924 9.0E-06 GTGCAGGTCCCGACCCGTCC 20 V_PLAGL1_03_M02786 TRANSFAC + 58223687 58223702 6.0E-06 GATGGGGCGCCCTGAT 16 V_HLF_01_M00260 TRANSFAC - 58224303 58224312 2.0E-06 GTTACACAAT 10 V_PITX2_01_M01447 TRANSFAC - 58221798 58221814 2.0E-06 TGTGGGGATTAAATGTC 17 V_SP1_Q2_01_M00933 TRANSFAC - 58223205 58223214 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC - 58223211 58223220 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC - 58223217 58223226 4.0E-06 CCCCGCCCCC 10 V_MEF2A_05_M01301 TRANSFAC - 58218459 58218470 1.0E-05 TGGTATATAAAA 12 V_AP2ALPHA_02_M01045 TRANSFAC - 58228231 58228245 1.0E-05 ACAGCCTTAGGGGGA 15 V_UF1H3BETA_Q6_M01068 TRANSFAC - 58224124 58224137 2.0E-06 GCTGGGGGAGGGGA 14 V_OBOX5_01_M01381 TRANSFAC - 58221798 58221814 0.0E+00 TGTGGGGATTAAATGTC 17 V_OBOX3_02_M03065 TRANSFAC - 58221799 58221815 2.0E-06 ATGTGGGGATTAAATGT 17 V_FEV_01_M02269 TRANSFAC - 58223860 58223867 1.0E-05 CAGGAAAT 8 V_OTX1_01_M01366 TRANSFAC - 58221798 58221814 0.0E+00 TGTGGGGATTAAATGTC 17 V_OBOX6_06_M03067 TRANSFAC + 58221798 58221814 0.0E+00 GACATTTAATCCCCACA 17 V_OBOX3_01_M01466 TRANSFAC - 58221799 58221815 2.0E-06 ATGTGGGGATTAAATGT 17 PPARG_RXRA_MA0065.2 JASPAR - 58223710 58223724 0.0E+00 CTGGGGGAGAGGTCA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.