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RCN3


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
57333 reticulocalbin 3, EF-hand calcium binding domain chr19 +50025874 - 50031374 50030874

Transcription Factor Binding Sites

 
Download all TFBS in the RCN3 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
KLF16_C2H2_DBD_monomeric_11_1 SELEX - 50031201 50031211 1.0E-05 GCCCCGCCCCC 11
FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 50030894 50030910 1.0E-05 CCAAACAAAACAAAACA 17
EBF1_EBF_full_dimeric_14_1 SELEX + 50031715 50031728 1.0E-06 ACTCCCCAGGGACC 14
TBX5_TBX_DBD_dimeric_20_1 SELEX + 50030916 50030935 4.0E-06 AAGTGTTGGAACGTACACCT 20
SP1_MA0079.2 JASPAR - 50031201 50031210 7.0E-06 CCCCGCCCCC 10
Creb3l2_bZIP_DBD_dimeric_13_1 SELEX - 50031728 50031740 7.0E-06 CGCCACATCATCG 13
NFATC1_NFAT_full_dimeric_20_1 SELEX + 50030963 50030982 1.0E-06 AAGGGAAAAATACATTTCCC 20
NFATC1_NFAT_full_dimeric_20_1 SELEX + 50030964 50030983 4.0E-06 AGGGAAAAATACATTTCCCG 20
ZBTB49_C2H2_DBD_monomeric_17_1 SELEX + 50031476 50031492 1.0E-06 TTCCCCCTGGCAGGTCT 17
TBX4_TBX_DBD_dimeric_20_1 SELEX + 50030916 50030935 4.0E-06 AAGTGTTGGAACGTACACCT 20
TBX4_TBX_DBD_dimeric_20_1 SELEX - 50030916 50030935 6.0E-06 AGGTGTACGTTCCAACACTT 20
INSM1_MA0155.1 JASPAR - 50031476 50031487 7.0E-06 TGCCAGGGGGAA 12
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 50030954 50030968 7.0E-06 ACAAAGGGAAAGGGA 15
CREB3L1_bZIP_full_dimeric_14_1 SELEX - 50031117 50031130 8.0E-06 TCGCCACGTCCACA 14
IRF3_IRF_full_trimeric_21_1 SELEX + 50030953 50030973 5.0E-06 GACAAAGGGAAAGGGAAAAAT 21
FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 50030885 50030897 6.0E-06 AACAAAACAAAAA 13
RREB1_MA0073.1 JASPAR - 50030884 50030903 3.0E-06 AAACAAAACAAAACAAAAAT 20
RREB1_MA0073.1 JASPAR - 50030889 50030908 1.0E-06 AAACAAAACAAAACAAAACA 20
V_FOXP1_01_M00987 TRANSFAC + 50030878 50030897 0.0E+00 TTGTTTATTTTTGTTTTGTT 20
V_FOXP1_01_M00987 TRANSFAC + 50030882 50030901 0.0E+00 TTATTTTTGTTTTGTTTTGT 20
V_FOXP1_01_M00987 TRANSFAC + 50030884 50030903 0.0E+00 ATTTTTGTTTTGTTTTGTTT 20
V_FOXP1_01_M00987 TRANSFAC + 50030887 50030906 1.0E-06 TTTGTTTTGTTTTGTTTTGT 20
V_FOXP1_01_M00987 TRANSFAC + 50030888 50030907 7.0E-06 TTGTTTTGTTTTGTTTTGTT 20
V_FOXP1_01_M00987 TRANSFAC + 50030889 50030908 0.0E+00 TGTTTTGTTTTGTTTTGTTT 20
V_FOXP1_01_M00987 TRANSFAC + 50030894 50030913 5.0E-06 TGTTTTGTTTTGTTTGGTAT 20
V_HSF2_01_M00147 TRANSFAC + 50031515 50031524 8.0E-06 AGAAGATTCG 10
V_TCF3_01_M01594 TRANSFAC + 50030885 50030897 1.0E-06 TTTTTGTTTTGTT 13
V_TCF3_01_M01594 TRANSFAC + 50030890 50030902 1.0E-06 GTTTTGTTTTGTT 13
V_TCF3_01_M01594 TRANSFAC + 50030895 50030907 1.0E-06 GTTTTGTTTTGTT 13
V_BCL6_01_M01183 TRANSFAC + 50030884 50030899 3.0E-06 ATTTTTGTTTTGTTTT 16
V_BCL6_01_M01183 TRANSFAC + 50030889 50030904 6.0E-06 TGTTTTGTTTTGTTTT 16
V_SP1_Q6_01_M00931 TRANSFAC - 50031162 50031171 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC + 50031202 50031211 4.0E-06 GGGGCGGGGC 10
V_SRY_02_M00160 TRANSFAC - 50030889 50030900 8.0E-06 CAAAACAAAACA 12
V_SRY_02_M00160 TRANSFAC - 50030894 50030905 8.0E-06 CAAAACAAAACA 12
V_IRF2_Q6_M01882 TRANSFAC + 50030953 50030968 9.0E-06 GACAAAGGGAAAGGGA 16
V_IRF2_Q6_M01882 TRANSFAC + 50030959 50030974 7.0E-06 GGGAAAGGGAAAAATA 16
V_HNF3_Q6_01_M01012 TRANSFAC + 50030880 50030897 4.0E-06 GTTTATTTTTGTTTTGTT 18
V_HNF3_Q6_01_M01012 TRANSFAC + 50030884 50030901 6.0E-06 ATTTTTGTTTTGTTTTGT 18
V_SP1_03_M02281 TRANSFAC - 50031201 50031210 7.0E-06 CCCCGCCCCC 10
V_COUPTF_Q6_M01036 TRANSFAC + 50031692 50031714 1.0E-06 ACCCCTGACCCCTGGCCTTTGCC 23
V_TAL1_Q6_M00993 TRANSFAC - 50031001 50031010 7.0E-06 TCCAGCTGTT 10
V_ZNF219_01_M01122 TRANSFAC - 50031196 50031207 5.0E-06 CGCCCCCCGCCC 12
V_SOX7_03_M02807 TRANSFAC - 50030878 50030899 4.0E-06 AAAACAAAACAAAAATAAACAA 22
V_SOX7_03_M02807 TRANSFAC - 50030883 50030904 6.0E-06 AAAACAAAACAAAACAAAAATA 22
V_ZFP105_03_M02827 TRANSFAC - 50030882 50030896 1.0E-06 ACAAAACAAAAATAA 15
V_HIC1_03_M01073 TRANSFAC + 50031129 50031146 5.0E-06 GAGGAGTGCCCGCGGCAC 18
V_HSF1_01_M00146 TRANSFAC + 50031515 50031524 9.0E-06 AGAAGATTCG 10
V_SP1_Q6_M00196 TRANSFAC - 50031161 50031173 3.0E-06 ACGGGGCGGGGCC 13
V_SP1_Q6_M00196 TRANSFAC + 50031200 50031212 0.0E+00 GGGGGGCGGGGCT 13
V_IRF3_Q3_M01279 TRANSFAC - 50030956 50030968 1.0E-06 TCCCTTTCCCTTT 13
V_HNF1_Q6_01_M01011 TRANSFAC - 50030876 50030896 1.0E-06 ACAAAACAAAAATAAACAAAA 21
V_SREBP_Q6_M01168 TRANSFAC + 50031937 50031951 9.0E-06 CAACTCACCCCAGAG 15
V_TAXCREB_02_M00115 TRANSFAC - 50031447 50031461 2.0E-06 GTGGCGCACATCCCA 15
V_SOX11_03_M02795 TRANSFAC - 50030881 50030897 9.0E-06 AACAAAACAAAAATAAA 17
V_INSM1_01_M02268 TRANSFAC - 50031476 50031487 7.0E-06 TGCCAGGGGGAA 12
V_FOXO1_Q5_M01216 TRANSFAC - 50030892 50030900 8.0E-06 CAAAACAAA 9
V_FOXO1_Q5_M01216 TRANSFAC - 50030897 50030905 8.0E-06 CAAAACAAA 9
V_IRF7_01_M00453 TRANSFAC + 50030958 50030975 9.0E-06 AGGGAAAGGGAAAAATAC 18
V_NEUROD_02_M01288 TRANSFAC - 50031000 50031011 9.0E-06 CTCCAGCTGTTC 12
V_SP4_Q5_M01273 TRANSFAC + 50031162 50031172 2.0E-06 GCCCCGCCCCG 11
V_SP4_Q5_M01273 TRANSFAC - 50031201 50031211 1.0E-06 GCCCCGCCCCC 11
V_FAC1_01_M00456 TRANSFAC - 50030885 50030898 0.0E+00 AAACAAAACAAAAA 14
V_FAC1_01_M00456 TRANSFAC - 50030890 50030903 9.0E-06 AAACAAAACAAAAC 14
V_FAC1_01_M00456 TRANSFAC - 50030895 50030908 9.0E-06 AAACAAAACAAAAC 14
V_FOXL1_02_M02857 TRANSFAC - 50030884 50030899 0.0E+00 AAAACAAAACAAAAAT 16
V_FOXL1_02_M02857 TRANSFAC - 50030889 50030904 0.0E+00 AAAACAAAACAAAACA 16
V_FOXL1_02_M02857 TRANSFAC - 50030894 50030909 0.0E+00 CAAACAAAACAAAACA 16
V_FOXL1_02_M02857 TRANSFAC - 50030899 50030914 2.0E-06 TATACCAAACAAAACA 16
V_FOXJ3_06_M02855 TRANSFAC - 50030884 50030900 0.0E+00 CAAAACAAAACAAAAAT 17
V_FOXJ3_06_M02855 TRANSFAC - 50030889 50030905 0.0E+00 CAAAACAAAACAAAACA 17
V_FOXJ3_06_M02855 TRANSFAC - 50030894 50030910 2.0E-06 CCAAACAAAACAAAACA 17
V_E2F3_03_M02743 TRANSFAC - 50031576 50031590 5.0E-06 AAAAGGGCGGGCGAT 15
V_E2F2_03_M02742 TRANSFAC - 50031576 50031590 6.0E-06 AAAAGGGCGGGCGAT 15
V_FOXO3_01_M00477 TRANSFAC + 50030885 50030898 6.0E-06 TTTTTGTTTTGTTT 14
V_SOX2_Q6_M01272 TRANSFAC + 50030881 50030896 2.0E-06 TTTATTTTTGTTTTGT 16
V_SP1_Q2_01_M00933 TRANSFAC - 50031201 50031210 4.0E-06 CCCCGCCCCC 10
V_P300_01_M00033 TRANSFAC + 50031318 50031331 2.0E-06 AAAGGGAGTGGGTG 14
V_SP1_Q4_01_M00932 TRANSFAC - 50031161 50031173 2.0E-06 ACGGGGCGGGGCC 13
V_SP1_Q4_01_M00932 TRANSFAC + 50031200 50031212 1.0E-06 GGGGGGCGGGGCT 13
V_TCF3_05_M02920 TRANSFAC + 50030964 50030978 5.0E-06 AGGGAAAAATACATT 15
V_COUP_DR1_Q6_M00765 TRANSFAC + 50032147 50032159 7.0E-06 GGACCTTTGAGAC 13
V_ARID5A_04_M02840 TRANSFAC - 50030903 50030919 8.0E-06 ACTTCTATACCAAACAA 17
V_SMAD1_01_M01590 TRANSFAC - 50030889 50030900 6.0E-06 CAAAACAAAACA 12
V_SMAD1_01_M01590 TRANSFAC - 50030894 50030905 6.0E-06 CAAAACAAAACA 12
V_NANOG_02_M01247 TRANSFAC - 50030880 50030899 1.0E-06 AAAACAAAACAAAAATAAAC 20
V_NANOG_02_M01247 TRANSFAC - 50030885 50030904 0.0E+00 AAAACAAAACAAAACAAAAA 20
V_NANOG_02_M01247 TRANSFAC - 50030890 50030909 1.0E-06 CAAACAAAACAAAACAAAAC 20
V_NANOG_02_M01247 TRANSFAC - 50030895 50030914 3.0E-06 TATACCAAACAAAACAAAAC 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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