Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PTGDS Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5730 prostaglandin D2 synthase 21kDa (brain) chr9 + 139866955 - 139872455 139871955 Transcription Factor Binding Sites   Download all TFBS in the PTGDS promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX - 139873000 139873011 7.0E-06 ACCACGCCCATC 12 SP3_C2H2_DBD_monomeric_11_1 SELEX - 139872834 139872844 1.0E-05 GCCACGCCCCT 11 SP3_C2H2_DBD_monomeric_11_1 SELEX - 139872866 139872876 1.0E-05 GCCACGCCCCT 11 SP3_C2H2_DBD_monomeric_11_1 SELEX - 139873001 139873011 8.0E-06 ACCACGCCCAT 11 SP3_C2H2_DBD_monomeric_11_1 SELEX - 139873301 139873311 1.0E-05 GCCACGCCCCT 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 139872834 139872844 7.0E-06 GCCACGCCCCT 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 139872866 139872876 7.0E-06 GCCACGCCCCT 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 139873301 139873311 7.0E-06 GCCACGCCCCT 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 139873331 139873341 1.0E-05 GCCCCGCCCCC 11 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 139873299 139873312 4.0E-06 AGCCACGCCCCTCA 14 KLF13_C2H2_full_monomeric_18_1 SELEX - 139872829 139872846 9.0E-06 TGGCCACGCCCCTCCCGA 18 KLF13_C2H2_full_monomeric_18_1 SELEX - 139873198 139873215 7.0E-06 TGACCACGCCCCTCACAT 18 MEF2A_MA0052.1 JASPAR - 139871926 139871935 5.0E-06 CTATTTATGG 10 ESR1_MA0112.2 JASPAR + 139870173 139870192 5.0E-06 GTCCTGGGTCTCCCTGCCCC 20 SP1_MA0079.2 JASPAR - 139872917 139872926 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR - 139873331 139873340 7.0E-06 CCCCGCCCCC 10 SP4_C2H2_full_monomeric_17_1 SELEX - 139873298 139873314 7.0E-06 GCAGCCACGCCCCTCAC 17 SP4_C2H2_full_monomeric_17_1 SELEX - 139873328 139873344 9.0E-06 CCGGCCCCGCCCCCACG 17 SP1_C2H2_DBD_monomeric_11_1 SELEX - 139873001 139873011 8.0E-06 ACCACGCCCAT 11 SP1_C2H2_DBD_monomeric_11_1 SELEX - 139873137 139873147 1.0E-05 ACCACGCCCCT 11 SP1_C2H2_DBD_monomeric_11_1 SELEX - 139873203 139873213 1.0E-05 ACCACGCCCCT 11 MZF1_5-13_MA0057.1 JASPAR + 139872920 139872929 4.0E-06 GGAGGGGGAA 10 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 139872831 139872845 5.0E-06 GGCCACGCCCCTCCC 15 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 139872863 139872877 8.0E-06 GGCCACGCCCCTGAC 15 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 139872928 139872942 1.0E-06 GACCACGCCCCACTT 15 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 139872998 139873012 1.0E-06 GACCACGCCCATCAG 15 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 139873101 139873115 9.0E-06 GGCCCCGCCCTTCAT 15 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 139873134 139873148 3.0E-06 GACCACGCCCCTCAC 15 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 139873200 139873214 3.0E-06 GACCACGCCCCTCAC 15 Zfx_MA0146.1 JASPAR - 139871797 139871810 6.0E-06 GAGGCCTGGGCCTG 14 V_KLF15_Q2_M01714 TRANSFAC + 139872927 139872940 1.0E-06 GAAGTGGGGCGTGG 14 V_CDX2_Q5_01_M01659 TRANSFAC + 139871925 139871935 8.0E-06 CCCATAAATAG 11 V_BTEB3_Q5_M01865 TRANSFAC - 139871967 139871979 7.0E-06 GCGAGGGAGGTGT 13 V_ZFP410_04_M02936 TRANSFAC - 139873264 139873280 3.0E-06 GACCCCCGCCCCTCAAT 17 V_MAX_Q6_M01830 TRANSFAC - 139870167 139870178 8.0E-06 CAGGACACGTGG 12 V_ESR1_01_M02261 TRANSFAC + 139870173 139870192 5.0E-06 GTCCTGGGTCTCCCTGCCCC 20 V_IK_Q5_M01169 TRANSFAC + 139872535 139872544 5.0E-06 GTTGGGAGGG 10 V_SP1_Q6_01_M00931 TRANSFAC + 139872900 139872909 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 139872950 139872959 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 139872964 139872973 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 139872982 139872991 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 139873035 139873044 7.0E-06 GGGGCGGGGT 10 V_SP1_Q6_01_M00931 TRANSFAC + 139873123 139873132 7.0E-06 GGGGCGGGGT 10 V_SP1_Q6_01_M00931 TRANSFAC + 139873171 139873180 7.0E-06 GGGGCGGGGT 10 V_SP1_Q6_01_M00931 TRANSFAC + 139873237 139873246 7.0E-06 GGGGCGGGGT 10 V_SP1_Q6_01_M00931 TRANSFAC + 139873288 139873297 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 139873332 139873341 4.0E-06 GGGGCGGGGC 10 V_EGR_Q6_M00807 TRANSFAC + 139873329 139873339 6.0E-06 GTGGGGGCGGG 11 V_SP1_03_M02281 TRANSFAC - 139872917 139872926 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC - 139873331 139873340 7.0E-06 CCCCGCCCCC 10 V_GKLF_02_M01588 TRANSFAC - 139873000 139873011 4.0E-06 ACCACGCCCATC 12 V_GKLF_02_M01588 TRANSFAC - 139873103 139873114 5.0E-06 GCCCCGCCCTTC 12 V_NERF_Q2_M00531 TRANSFAC - 139870381 139870398 7.0E-06 GGGCAGGAAGAGAGTTGC 18 V_SP1_02_M01303 TRANSFAC - 139870475 139870485 5.0E-06 GGGGTGGGGTG 11 V_SP1_02_M01303 TRANSFAC + 139872987 139872997 8.0E-06 GGGGCGGGGGC 11 V_SP1_02_M01303 TRANSFAC + 139873020 139873030 8.0E-06 GGGGCGGGGAC 11 V_SP1_02_M01303 TRANSFAC + 139873035 139873045 8.0E-06 GGGGCGGGGTC 11 V_SP1_02_M01303 TRANSFAC + 139873123 139873133 8.0E-06 GGGGCGGGGTC 11 V_SP1_02_M01303 TRANSFAC + 139873171 139873181 8.0E-06 GGGGCGGGGTC 11 V_SP1_02_M01303 TRANSFAC + 139873237 139873247 8.0E-06 GGGGCGGGGTC 11 V_AP4_Q6_02_M01860 TRANSFAC - 139871836 139871848 4.0E-06 ACAGCTGCAGCCT 13 V_GC_01_M00255 TRANSFAC + 139873330 139873343 1.0E-06 TGGGGGCGGGGCCG 14 V_TGIF_02_M01346 TRANSFAC + 139870316 139870332 8.0E-06 TGGAATGACAGCCAGGA 17 V_BEL1_B_M00312 TRANSFAC - 139870316 139870343 1.0E-06 TGCCAGCTGAGTCCTGGCTGTCATTCCA 28 V_SIX1_01_M01313 TRANSFAC - 139870363 139870379 7.0E-06 GCTGGGATATCACCACA 17 V_HES1_Q2_M01009 TRANSFAC - 139870448 139870462 6.0E-06 ACCCCGCGTGGCCCG 15 V_KROX_Q6_M00982 TRANSFAC - 139873326 139873339 1.0E-06 CCCGCCCCCACGCC 14 V_SP1_Q6_M00196 TRANSFAC + 139872898 139872910 1.0E-06 GAGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC + 139872962 139872974 1.0E-06 GAGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC + 139873033 139873045 3.0E-06 GAGGGGCGGGGTC 13 V_SP1_Q6_M00196 TRANSFAC + 139873169 139873181 3.0E-06 GAGGGGCGGGGTC 13 V_SP1_Q6_M00196 TRANSFAC + 139873235 139873247 3.0E-06 GAGGGGCGGGGTC 13 V_SP1_Q6_M00196 TRANSFAC + 139873330 139873342 1.0E-06 TGGGGGCGGGGCC 13 V_MUSCLE_INI_B_M00321 TRANSFAC + 139870200 139870220 9.0E-06 CCGCCACCACACCCCAGAGCT 21 V_KLF7_03_M02773 TRANSFAC - 139872864 139872879 9.0E-06 CTGGCCACGCCCCTGA 16 V_KLF7_03_M02773 TRANSFAC - 139872897 139872912 4.0E-06 ATGGCCCCGCCCCTCA 16 V_KLF7_03_M02773 TRANSFAC - 139872929 139872944 3.0E-06 ATGACCACGCCCCACT 16 V_KLF7_03_M02773 TRANSFAC - 139872961 139872976 8.0E-06 GTGGCCCCGCCCCTCA 16 V_KLF7_03_M02773 TRANSFAC - 139872999 139873014 2.0E-06 CTGACCACGCCCATCA 16 V_KLF7_03_M02773 TRANSFAC - 139873032 139873047 2.0E-06 CTGACCCCGCCCCTCA 16 V_KLF7_03_M02773 TRANSFAC - 139873102 139873117 6.0E-06 CTGGCCCCGCCCTTCA 16 V_KLF7_03_M02773 TRANSFAC - 139873120 139873135 4.0E-06 ACGACCCCGCCCCAAG 16 V_KLF7_03_M02773 TRANSFAC - 139873135 139873150 2.0E-06 CTGACCACGCCCCTCA 16 V_KLF7_03_M02773 TRANSFAC - 139873168 139873183 1.0E-06 ATGACCCCGCCCCTCA 16 V_KLF7_03_M02773 TRANSFAC - 139873201 139873216 2.0E-06 CTGACCACGCCCCTCA 16 V_KLF7_03_M02773 TRANSFAC - 139873234 139873249 1.0E-06 ATGACCCCGCCCCTCA 16 V_SP3_Q3_M00665 TRANSFAC + 139871745 139871758 5.0E-06 ACCAGTGGGCAGGG 14 V_SP1_01_M00008 TRANSFAC + 139872932 139872941 1.0E-05 GGGGCGTGGT 10 V_SP1_01_M00008 TRANSFAC + 139873035 139873044 3.0E-06 GGGGCGGGGT 10 V_SP1_01_M00008 TRANSFAC + 139873123 139873132 3.0E-06 GGGGCGGGGT 10 V_SP1_01_M00008 TRANSFAC + 139873138 139873147 1.0E-05 GGGGCGTGGT 10 V_SP1_01_M00008 TRANSFAC + 139873171 139873180 3.0E-06 GGGGCGGGGT 10 V_SP1_01_M00008 TRANSFAC + 139873204 139873213 1.0E-05 GGGGCGTGGT 10 V_SP1_01_M00008 TRANSFAC + 139873237 139873246 3.0E-06 GGGGCGGGGT 10 V_TGIF1_01_M03111 TRANSFAC + 139870316 139870332 8.0E-06 TGGAATGACAGCCAGGA 17 V_SIX2_01_M01433 TRANSFAC - 139870363 139870379 8.0E-06 GCTGGGATATCACCACA 17 V_MZF1_02_M00084 TRANSFAC + 139872917 139872929 1.0E-06 GGGGGAGGGGGAA 13 V_BCL6B_04_M02844 TRANSFAC - 139873264 139873279 2.0E-06 ACCCCCGCCCCTCAAT 16 V_NEUROD_02_M01288 TRANSFAC + 139871839 139871850 1.0E-06 CTGCAGCTGTGC 12 V_SP4_Q5_M01273 TRANSFAC - 139872899 139872909 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC - 139872963 139872973 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC - 139872981 139872991 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 139872986 139872996 7.0E-06 CCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 139873331 139873341 1.0E-06 GCCCCGCCCCC 11 V_AML2_Q3_01_M01854 TRANSFAC + 139871984 139871994 3.0E-06 CCACACCACTG 11 V_GATA1_04_M00128 TRANSFAC - 139870481 139870493 9.0E-06 AACAGATAGGGGT 13 V_MECP2_02_M01299 TRANSFAC - 139876172 139876181 7.0E-06 CCGGAGTTTA 10 V_LMO2COM_02_M00278 TRANSFAC - 139870483 139870491 7.0E-06 CAGATAGGG 9 V_ZFP281_01_M01597 TRANSFAC - 139871859 139871869 5.0E-06 TGGGGGATGGG 11 V_ZFP281_01_M01597 TRANSFAC + 139872530 139872540 9.0E-06 TGGGGGTTGGG 11 V_ZFP281_01_M01597 TRANSFAC + 139872916 139872926 7.0E-06 CGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 139873330 139873340 6.0E-06 TGGGGGCGGGG 11 V_ZFP281_04_M02831 TRANSFAC - 139872528 139872542 1.0E-05 CTCCCAACCCCCACC 15 V_SP1_Q2_01_M00933 TRANSFAC - 139872899 139872908 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 139872963 139872972 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 139873034 139873043 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 139873170 139873179 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 139873236 139873245 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 139873268 139873277 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 139873331 139873340 4.0E-06 CCCCGCCCCC 10 V_ARP1_01_M00155 TRANSFAC - 139874688 139874703 4.0E-06 TGAAGCCCTGGGCCTT 16 V_UF1H3BETA_Q6_M01068 TRANSFAC + 139872528 139872541 5.0E-06 GGTGGGGGTTGGGA 14 V_GATA1_02_M00126 TRANSFAC - 139870481 139870494 1.0E-06 GAACAGATAGGGGT 14 V_SP1_Q4_01_M00932 TRANSFAC + 139872898 139872910 2.0E-06 GAGGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC + 139872962 139872974 2.0E-06 GAGGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC + 139873033 139873045 5.0E-06 GAGGGGCGGGGTC 13 V_SP1_Q4_01_M00932 TRANSFAC + 139873103 139873115 9.0E-06 GAAGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC + 139873169 139873181 5.0E-06 GAGGGGCGGGGTC 13 V_SP1_Q4_01_M00932 TRANSFAC + 139873235 139873247 5.0E-06 GAGGGGCGGGGTC 13 V_SP1_Q4_01_M00932 TRANSFAC + 139873330 139873342 1.0E-06 TGGGGGCGGGGCC 13 V_GFI1_Q6_01_M02010 TRANSFAC - 139876269 139876278 7.0E-06 CTGAGATTTT 10 V_PAX2_02_M00486 TRANSFAC + 139876170 139876178 2.0E-06 AATAAACTC 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.