Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

CHRNA10


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
57053 cholinergic receptor, nicotinic, alpha 10 (neuronal) chr11 -3692114 - 3697614 3692614

Transcription Factor Binding Sites

 
Download all TFBS in the CHRNA10 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
TBX21_TBX_full_dimeric_16_1 SELEX + 3695838 3695853 4.0E-06 TGTGTGAAGTAACATC 16
Lhx8_homeodomain_DBD_dimeric_12_1 SELEX + 3695743 3695754 9.0E-06 TAATTGGAATTT 12
Lhx8_homeodomain_DBD_dimeric_12_1 SELEX - 3695743 3695754 6.0E-06 AAATTCCAATTA 12
MSX1_homeodomain_full_monomeric_8_1 SELEX - 3695742 3695749 7.0E-06 CCAATTAA 8
MSX2_homeodomain_DBD_monomeric_8_1 SELEX - 3695742 3695749 7.0E-06 CCAATTAA 8
TCF4_bHLH_full_dimeric_10_1 SELEX - 3695431 3695440 3.0E-06 CACACCTGTA 10
BSX_homeodomain_DBD_monomeric_8_1 SELEX - 3695742 3695749 7.0E-06 CCAATTAA 8
Msx3_homeodomain_DBD_monomeric_8_1 SELEX - 3695742 3695749 7.0E-06 CCAATTAA 8
SOX18_HMG_full_dimeric_15_3 SELEX - 3695791 3695805 1.0E-05 ATGAGTACTATTCCA 15
TBX1_TBX_DBD_dimeric_20_1 SELEX + 3695422 3695441 9.0E-06 TGCTGGGATTACAGGTGTGA 20
TEAD1_MA0090.1 JASPAR + 3695514 3695525 2.0E-06 AACATTCCTCTG 12
V_DMRT4_01_M01149 TRANSFAC - 3695507 3695519 9.0E-06 AATGTTTCAGAAA 13
V_MSX3_01_M01341 TRANSFAC - 3695739 3695754 4.0E-06 AAATTCCAATTAAGAT 16
V_HMGIY_Q3_M01010 TRANSFAC + 3695745 3695759 6.0E-06 ATTGGAATTTGCTCA 15
V_ISL2_01_M01328 TRANSFAC - 3695739 3695754 4.0E-06 AAATTCCAATTAAGAT 16
V_AP4_Q6_M00176 TRANSFAC - 3695619 3695628 5.0E-06 CTCAGCTGGA 10
V_NKX24_01_M01350 TRANSFAC + 3695817 3695832 5.0E-06 GATTCCTCTTGAAAAT 16
V_PAX7_01_M01339 TRANSFAC - 3695737 3695753 5.0E-06 AATTCCAATTAAGATTA 17
V_AP1_Q6_M00174 TRANSFAC - 3695596 3695606 1.0E-05 ACTGACTCACT 11
V_TCF3_04_M02816 TRANSFAC + 3695772 3695788 7.0E-06 GACAGATCAAAATAAGA 17
V_CART1_01_M00416 TRANSFAC + 3695740 3695757 7.0E-06 TCTTAATTGGAATTTGCT 18
V_NKX26_01_M01322 TRANSFAC - 3695738 3695753 9.0E-06 AATTCCAATTAAGATT 16
V_NKX61_01_M00424 TRANSFAC + 3695739 3695751 3.0E-06 ATCTTAATTGGAA 13
Hand1_Tcfe2a_MA0092.1 JASPAR + 3695787 3695796 7.0E-06 GATCTGGAAT 10
V_AP1_Q4_M00188 TRANSFAC - 3695596 3695606 9.0E-06 ACTGACTCACT 11
V_NKX25_02_M00241 TRANSFAC + 3695741 3695748 7.0E-06 CTTAATTG 8
V_JUNDM2_04_M02876 TRANSFAC + 3695571 3695586 7.0E-06 TTTTGTGACTCACTCA 16
V_JUNDM2_04_M02876 TRANSFAC - 3695572 3695587 2.0E-06 CTGAGTGAGTCACAAA 16
V_TEF_01_M01305 TRANSFAC + 3695514 3695525 2.0E-06 AACATTCCTCTG 12
V_TCF7_03_M02817 TRANSFAC + 3695772 3695788 6.0E-06 GACAGATCAAAATAAGA 17
V_AP1_01_M00517 TRANSFAC - 3695573 3695585 8.0E-06 GAGTGAGTCACAA 13
V_AP1_01_M00517 TRANSFAC + 3695595 3695607 6.0E-06 TAGTGAGTCAGTA 13
V_HAND1E47_01_M00222 TRANSFAC + 3695782 3695797 4.0E-06 AATAAGATCTGGAATA 16
V_FAC1_01_M00456 TRANSFAC - 3695567 3695580 8.0E-06 AGTCACAAAACATA 14
V_AREB6_02_M00413 TRANSFAC - 3695430 3695441 6.0E-06 TCACACCTGTAA 12
V_FOXL1_02_M02857 TRANSFAC + 3695775 3695790 3.0E-06 AGATCAAAATAAGATC 16
V_FOXJ3_06_M02855 TRANSFAC - 3695564 3695580 9.0E-06 AGTCACAAAACATAGTT 17
V_TEF1_Q6_03_M01817 TRANSFAC - 3695515 3695523 3.0E-06 GAGGAATGT 9
V_SMAD3_03_M02794 TRANSFAC + 3695662 3695678 2.0E-06 AAGTTCCAGACAACAGA 17
V_TBX5_Q5_M01044 TRANSFAC - 3695433 3695442 3.0E-06 CTCACACCTG 10
V_HSF2_02_M01244 TRANSFAC - 3695508 3695520 7.0E-06 GAATGTTTCAGAA 13
V_NFE2_01_M00037 TRANSFAC - 3695597 3695607 3.0E-06 TACTGACTCAC 11
V_BARHL2_01_M01446 TRANSFAC - 3695739 3695754 6.0E-06 AAATTCCAATTAAGAT 16
V_OG2_02_M01441 TRANSFAC - 3695806 3695822 9.0E-06 GGAATCAATTGAGTAGC 17
V_MAFK_04_M02880 TRANSFAC + 3693731 3693745 8.0E-06 TTGAAAACTGCAAGG 15
V_TCF11MAFG_01_M00284 TRANSFAC + 3695592 3695613 7.0E-06 ACATAGTGAGTCAGTAGTGGAG 22
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL