Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CIAPIN1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 57019 cytokine induced apoptosis inhibitor 1 chr16 - 57480869 - 57486369 57481369 Transcription Factor Binding Sites   Download all TFBS in the CIAPIN1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Sox17_MA0078.1 JASPAR + 57478823 57478831 7.0E-06 ATCATTGTC 9 ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 57481600 57481618 0.0E+00 CAAGGTGAGGTGAAGGGCA 19 Tp53_p53l_DBD_dimeric_18_1 SELEX + 57481810 57481827 8.0E-06 TCAAGTCCATTGCCAAGT 18 EBF1_EBF_full_dimeric_14_1 SELEX + 57480844 57480857 8.0E-06 AACCCCCAGGGACC 14 YY1_C2H2_full_monomeric_11_1 SELEX - 57481415 57481425 5.0E-06 GCCGCCATTTT 11 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX + 57480875 57480888 5.0E-06 GAGGCCCAAGGTCA 14 Esrrb_MA0141.1 JASPAR + 57480877 57480888 3.0E-06 GGCCCAAGGTCA 12 SOX9_HMG_DBD_monomeric_9_1 SELEX - 57481869 57481877 9.0E-06 AAACAATGG 9 EBF1_MA0154.1 JASPAR + 57481048 57481057 5.0E-06 ACCCCAGGGA 10 Tcfcp2l1_MA0145.1 JASPAR - 57481544 57481557 4.0E-06 CCAGCTGAAGCCGG 14 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 57481601 57481618 0.0E+00 AAGGTGAGGTGAAGGGCA 18 YY2_C2H2_full_monomeric_11_1 SELEX - 57481415 57481425 1.0E-06 GCCGCCATTTT 11 PBX1_MA0070.1 JASPAR + 57480661 57480672 9.0E-06 CACTCAATCAAT 12 GMEB2_SAND_DBD_dimer-of-dimers_15_1 SELEX + 57481751 57481765 1.0E-06 TACGAAAGTCACGCA 15 Klf12_C2H2_DBD_monomeric_15_1 SELEX + 57480646 57480660 9.0E-06 GACCACACCCAGACC 15 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX + 57480880 57480890 6.0E-06 CCAAGGTCACA 11 SOX9_MA0077.1 JASPAR - 57481869 57481877 2.0E-06 AAACAATGG 9 SPI1_ETS_full_monomeric_14_1 SELEX + 57478919 57478932 6.0E-06 TAAAAGCGGATGTC 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 57478727 57478739 5.0E-06 TAAAACAAAAAAA 13 NFIA_NFI_full_monomeric_10_1 SELEX + 57481818 57481827 5.0E-06 ATTGCCAAGT 10 RXR_RAR_DR5_MA0159.1 JASPAR + 57481602 57481618 9.0E-06 AGGTGAGGTGAAGGGCA 17 V_AP2ALPHA_Q6_M01857 TRANSFAC - 57481457 57481467 9.0E-06 AGCCTCCAGCC 11 V_ER_Q6_02_M00959 TRANSFAC - 57480522 57480532 3.0E-06 GAGGTCACGGT 11 V_MYOD_Q6_M00184 TRANSFAC - 57481838 57481847 7.0E-06 TCCACCTGTC 10 V_AR_02_M00953 TRANSFAC - 57478929 57478955 6.0E-06 ACCTAAAAAACAGTCTGTTCTCAGACA 27 V_DUXL_01_M01390 TRANSFAC + 57480660 57480676 4.0E-06 CCACTCAATCAATCCTT 17 V_PLAGL1_04_M02890 TRANSFAC - 57480799 57480815 7.0E-06 GTCGGGGGGTACCTGAG 17 V_NFY_Q6_M00185 TRANSFAC - 57480891 57480901 1.0E-05 TAGCCAATCGT 11 V_SOX30_03_M02804 TRANSFAC - 57481865 57481880 8.0E-06 GGGAAACAATGGACTA 16 V_LRH1_Q5_01_M02098 TRANSFAC + 57480878 57480888 9.0E-06 GCCCAAGGTCA 11 V_AR_Q6_01_M01996 TRANSFAC - 57478934 57478948 2.0E-06 AAACAGTCTGTTCTC 15 V_SRY_02_M00160 TRANSFAC + 57478727 57478738 1.0E-06 TAAAACAAAAAA 12 V_NFAT3_Q3_M01734 TRANSFAC - 57478746 57478755 6.0E-06 ACTTTTTCCT 10 V_GM497_04_M02864 TRANSFAC + 57478870 57478885 9.0E-06 TGAGGCACACACATGT 16 V_CDX_Q5_M00991 TRANSFAC + 57478730 57478747 7.0E-06 AACAAAAAAACCCGTAAG 18 V_AR_03_M00956 TRANSFAC - 57478929 57478955 2.0E-06 ACCTAAAAAACAGTCTGTTCTCAGACA 27 V_ELF4_04_M02850 TRANSFAC + 57478724 57478740 2.0E-06 TTTTAAAACAAAAAAAC 17 V_ELF4_04_M02850 TRANSFAC + 57478725 57478741 4.0E-06 TTTAAAACAAAAAAACC 17 V_SOX7_03_M02807 TRANSFAC + 57478723 57478744 4.0E-06 CTTTTAAAACAAAAAAACCCGT 22 V_HELIOSA_02_M01004 TRANSFAC + 57478743 57478753 6.0E-06 GTAAGGAAAAA 11 V_ZFP105_03_M02827 TRANSFAC + 57478726 57478740 4.0E-06 TTAAAACAAAAAAAC 15 V_SREBP_Q6_M01168 TRANSFAC + 57480609 57480623 7.0E-06 CAAATCACCCGAGGG 15 V_SOX18_03_M02801 TRANSFAC - 57478724 57478739 1.0E-06 TTTTTTTGTTTTAAAA 16 V_YY1_Q6_02_M01035 TRANSFAC - 57481415 57481425 0.0E+00 GCCGCCATTTT 11 V_DUXBL_01_M02968 TRANSFAC + 57480660 57480676 4.0E-06 CCACTCAATCAATCCTT 17 V_REX1_03_M01744 TRANSFAC + 57481415 57481426 1.0E-06 AAAATGGCGGCG 12 V_ATF1_Q6_01_M01861 TRANSFAC + 57478830 57478838 4.0E-06 TCACGTCAC 9 V_GR_Q6_M00192 TRANSFAC - 57478933 57478951 7.0E-06 AAAAAACAGTCTGTTCTCA 19 V_DAX1_01_M01248 TRANSFAC + 57480875 57480894 3.0E-06 GAGGCCCAAGGTCACAACGA 20 V_EBF1_01_M02267 TRANSFAC + 57481048 57481057 5.0E-06 ACCCCAGGGA 10 V_IK3_01_M00088 TRANSFAC - 57481032 57481044 6.0E-06 GACTGGGAATTTC 13 V_OCT4_02_M01124 TRANSFAC + 57478718 57478732 4.0E-06 TTTGTCTTTTAAAAC 15 V_SOX11_03_M02795 TRANSFAC + 57478725 57478741 3.0E-06 TTTAAAACAAAAAAACC 17 V_SOX11_03_M02795 TRANSFAC - 57481865 57481881 5.0E-06 CGGGAAACAATGGACTA 17 V_SF1_Q6_01_M01132 TRANSFAC - 57480880 57480888 7.0E-06 TGACCTTGG 9 V_GR_Q6_02_M01836 TRANSFAC - 57478933 57478945 4.0E-06 CAGTCTGTTCTCA 13 V_YY1_03_M02044 TRANSFAC - 57481414 57481425 0.0E+00 GCCGCCATTTTG 12 V_CAAT_01_M00254 TRANSFAC - 57480892 57480903 4.0E-06 AGTAGCCAATCG 12 V_T3R_01_M00239 TRANSFAC - 57480521 57480536 5.0E-06 CAAGGAGGTCACGGTC 16 V_LBP9_01_M01592 TRANSFAC - 57481541 57481557 2.0E-06 CCAGCTGAAGCCGGCCT 17 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 57481189 57481197 8.0E-06 GAGGGTGGG 9 V_FOXL1_02_M02857 TRANSFAC + 57478723 57478738 0.0E+00 CTTTTAAAACAAAAAA 16 V_T3R_Q6_M00963 TRANSFAC - 57481835 57481843 7.0E-06 CCTGTCCTT 9 V_ERR2_01_M01589 TRANSFAC + 57480880 57480891 8.0E-06 CCAAGGTCACAA 12 V_PBX1_02_M00124 TRANSFAC + 57480660 57480674 9.0E-06 CCACTCAATCAATCC 15 V_RXR_RAR_01_M02272 TRANSFAC + 57481602 57481618 9.0E-06 AGGTGAGGTGAAGGGCA 17 V_SRF_06_M02916 TRANSFAC + 57478723 57478739 2.0E-06 CTTTTAAAACAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 57478724 57478740 2.0E-06 TTTTAAAACAAAAAAAC 17 V_SRF_06_M02916 TRANSFAC + 57478725 57478741 1.0E-06 TTTAAAACAAAAAAACC 17 V_SRF_06_M02916 TRANSFAC + 57478726 57478742 7.0E-06 TTAAAACAAAAAAACCC 17 V_SATB1_01_M01232 TRANSFAC + 57480700 57480711 7.0E-06 TTCTAGTAACAA 12 V_EKLF_Q5_M01874 TRANSFAC + 57480648 57480657 5.0E-06 CCACACCCAG 10 V_SOX12_03_M02796 TRANSFAC - 57478724 57478737 1.0E-06 TTTTTGTTTTAAAA 14 V_DMRT1_01_M01146 TRANSFAC - 57478896 57478910 7.0E-06 CAGTAACATTTTAGA 15 V_SMAD1_01_M01590 TRANSFAC + 57478727 57478738 7.0E-06 TAAAACAAAAAA 12 V_SOX9_Q4_M01284 TRANSFAC - 57481867 57481877 8.0E-06 AAACAATGGAC 11 V_NANOG_02_M01247 TRANSFAC + 57478723 57478742 6.0E-06 CTTTTAAAACAAAAAAACCC 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.