Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

OTOR


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
56914 otoraplin chr20 +16724002 - 16729502 16729002

Transcription Factor Binding Sites

 
Download all TFBS in the OTOR promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 16728210 16728227 1.0E-06 TCAGTAAATATTTGCTGA 18
FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 16728210 16728227 0.0E+00 TCAGCAAATATTTACTGA 18
ZNF435_C2H2_full_dimeric_18_1 SELEX - 16728204 16728221 1.0E-06 AATATTTACTGAGCACTT 18
TBP_MA0108.2 JASPAR - 16725042 16725056 9.0E-06 GTATAAATGCAGTTG 15
FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 16728212 16728225 1.0E-06 AGTAAATATTTGCT 14
FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 16728212 16728225 0.0E+00 AGCAAATATTTACT 14
BARHL2_homeodomain_full_dimeric_16_1 SELEX - 16725048 16725063 1.0E-05 TAACTGGGTATAAATG 16
FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 16728212 16728225 1.0E-06 AGTAAATATTTGCT 14
FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 16728212 16728225 0.0E+00 AGCAAATATTTACT 14
FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 16728212 16728225 0.0E+00 AGTAAATATTTGCT 14
FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 16728212 16728225 0.0E+00 AGCAAATATTTACT 14
FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 16728212 16728225 1.0E-06 AGTAAATATTTGCT 14
FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 16728212 16728225 0.0E+00 AGCAAATATTTACT 14
GBX2_homeodomain_DBD_dimeric_14_1 SELEX - 16728203 16728216 1.0E-05 TTACTGAGCACTTA 14
FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 16728210 16728220 9.0E-06 TCAGTAAATAT 11
V_BCL6_01_M01183 TRANSFAC - 16728215 16728230 5.0E-06 TATTCAGCAAATATTT 16
V_MAFB_05_M02775 TRANSFAC + 16728217 16728233 9.0E-06 ATATTTGCTGAATAGAC 17
V_ZFP691_03_M02833 TRANSFAC + 16728200 16728216 5.0E-06 CAGTAAGTGCTCAGTAA 17
V_TATA_01_M00252 TRANSFAC - 16725042 16725056 9.0E-06 GTATAAATGCAGTTG 15
V_XFD3_01_M00269 TRANSFAC + 16728210 16728223 4.0E-06 TCAGTAAATATTTG 14
V_FOXJ2_01_M00422 TRANSFAC - 16728213 16728230 5.0E-06 TATTCAGCAAATATTTAC 18
V_RFX3_04_M02788 TRANSFAC + 16725030 16725052 8.0E-06 ATTGGCTCTTGGCAACTGCATTT 23
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL