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BARHL1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 56751 BarH-like homeobox 1 chr9 + 135452992 - 135458492 135457992 Barhl1_homeodomain_DBD_dimeric_16_1 Barhl1_homeodomain_DBD_monomeric_10_1 V_BARHL1_01_M01332 Transcription Factor Binding Sites   Download all TFBS in the BARHL1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 135460843 135460860 3.0E-06 CAAATAAATATTGTTTGA 18 IRF7_IRF_DBD_dimeric_14_1 SELEX + 135457466 135457479 5.0E-06 CCCAAAGTAAAAGT 14 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 135457442 135457458 7.0E-06 AGAAACAACAAAAAAAA 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 135457445 135457461 5.0E-06 AACAACAAAAAAAAACC 17 TEF_bZIP_DBD_dimeric_12_1 SELEX + 135461748 135461759 7.0E-06 GGTTATATAATC 12 TEF_bZIP_DBD_dimeric_12_1 SELEX - 135461748 135461759 5.0E-06 GATTATATAACC 12 HLF_bZIP_full_dimeric_12_1 SELEX + 135461748 135461759 8.0E-06 GGTTATATAATC 12 HLF_bZIP_full_dimeric_12_1 SELEX - 135461748 135461759 5.0E-06 GATTATATAACC 12 EWSR1-FLI1_MA0149.1 JASPAR + 135457501 135457518 2.0E-06 GGAAGGGGGGGAGGAGAA 18 EWSR1-FLI1_MA0149.1 JASPAR - 135462264 135462281 1.0E-06 GGAAGGGAGGAAGCCGAA 18 EWSR1-FLI1_MA0149.1 JASPAR - 135462268 135462285 1.0E-06 GACAGGAAGGGAGGAAGC 18 NFYA_MA0060.1 JASPAR + 135457363 135457378 2.0E-06 CAGAGCCAATCAGCGT 16 DBP_bZIP_full_dimeric_12_1 SELEX + 135461748 135461759 7.0E-06 GGTTATATAATC 12 DBP_bZIP_full_dimeric_12_1 SELEX - 135461748 135461759 7.0E-06 GATTATATAACC 12 Pax4_MA0068.1 JASPAR + 135457434 135457463 1.0E-06 GAAAAAAAAGAAACAACAAAAAAAAACCCA 30 Pax4_MA0068.1 JASPAR + 135457435 135457464 0.0E+00 AAAAAAAAGAAACAACAAAAAAAAACCCAG 30 Pax4_MA0068.1 JASPAR + 135457437 135457466 1.0E-06 AAAAAAGAAACAACAAAAAAAAACCCAGAC 30 REL_MA0101.1 JASPAR - 135461702 135461711 6.0E-06 GGGGCTTTCC 10 GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX + 135461735 135461751 7.0E-06 AAGTGGTCTAGCTGGTT 17 Otx1_homeodomain_DBD_dimeric_15_1 SELEX - 135461753 135461767 1.0E-05 TCTAAAGCGATTATA 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 135457467 135457481 5.0E-06 CCAAAGTAAAAGTGA 15 HLF_MA0043.1 JASPAR + 135461748 135461759 7.0E-06 GGTTATATAATC 12 REST_MA0138.2 JASPAR - 135457660 135457680 0.0E+00 ATCAGCACCGCGGAGAGCGGC 21 REST_MA0138.2 JASPAR - 135457729 135457749 1.0E-06 GTCAGCACCGCAGATAGCTGC 21 IRF3_IRF_full_trimeric_21_1 SELEX + 135457301 135457321 5.0E-06 ATCAAACTGAAAGGGAATCGG 21 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 135457412 135457424 6.0E-06 AAAAAAACACACA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 135457436 135457448 8.0E-06 AAAAAAAGAAACA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 135457445 135457457 4.0E-06 AACAACAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 135461666 135461678 2.0E-06 ATAAAAGAAAACA 13 NFIA_NFI_full_monomeric_10_1 SELEX + 135453338 135453347 9.0E-06 AGTGCCAAGA 10 NFE2L2_MA0150.1 JASPAR - 135460769 135460779 7.0E-06 ATGACTCAGCT 11 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 135457445 135457458 4.0E-06 AACAACAAAAAAAA 14 V_MEQ_01_M02049 TRANSFAC + 135457417 135457425 7.0E-06 AACACACAC 9 V_FOXP1_01_M00987 TRANSFAC - 135457412 135457431 9.0E-06 TGTGTTGTGTGTGTTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 135457422 135457441 2.0E-06 TTTTTTTCGTTGTGTTGTGT 20 V_FOXP1_01_M00987 TRANSFAC - 135457436 135457455 1.0E-06 TTTTTGTTGTTTCTTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 135457437 135457456 0.0E+00 TTTTTTGTTGTTTCTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 135457439 135457458 0.0E+00 TTTTTTTTGTTGTTTCTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 135461666 135461685 0.0E+00 TTTTCTCTGTTTTCTTTTAT 20 V_NFKB_Q6_01_M00774 TRANSFAC + 135461697 135461712 7.0E-06 TTGGGGGAAAGCCCCA 16 V_NRSF_Q4_M01028 TRANSFAC + 135457563 135457581 0.0E+00 GCGCTGTCCACGGTGCTGA 19 V_NRSF_Q4_M01028 TRANSFAC + 135457661 135457679 0.0E+00 CCGCTCTCCGCGGTGCTGA 19 V_ZFX_01_M01593 TRANSFAC + 135460153 135460168 1.0E-05 CCCCAGGCCCGGGCCC 16 V_HMGIY_Q3_M01010 TRANSFAC + 135457486 135457500 6.0E-06 AGTTCATTTTTTAAA 15 V_BCL6_01_M01183 TRANSFAC - 135457438 135457453 7.0E-06 TTTGTTGTTTCTTTTT 16 V_ETS_B_M00340 TRANSFAC - 135460774 135460787 6.0E-06 TGGAGGAAATGACT 14 V_EBOX_Q6_01_M01034 TRANSFAC - 135457390 135457399 8.0E-06 CCACGTGTCC 10 V_SOX5_01_M00042 TRANSFAC + 135460844 135460853 7.0E-06 CAAACAATAT 10 V_RELBP52_01_M01239 TRANSFAC - 135461702 135461711 4.0E-06 GGGGCTTTCC 10 V_FOXJ2_02_M00423 TRANSFAC + 135460844 135460857 1.0E-06 CAAACAATATTTAT 14 V_IRF_Q6_01_M00972 TRANSFAC + 135457437 135457447 5.0E-06 AAAAAAGAAAC 11 V_IRF2_Q6_M01882 TRANSFAC + 135457301 135457316 6.0E-06 ATCAAACTGAAAGGGA 16 V_IRF2_Q6_M01882 TRANSFAC + 135457435 135457450 8.0E-06 AAAAAAAAGAAACAAC 16 V_HNF3_Q6_01_M01012 TRANSFAC - 135457439 135457456 6.0E-06 TTTTTTGTTGTTTCTTTT 18 V_HNF3_Q6_01_M01012 TRANSFAC - 135461666 135461683 8.0E-06 TTCTCTGTTTTCTTTTAT 18 V_MAF_Q6_M00648 TRANSFAC + 135461728 135461743 4.0E-06 TTTGGGGAAGTGGTCT 16 V_TCFAP2E_04_M02926 TRANSFAC + 135457429 135457442 5.0E-06 ACAACGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 135457431 135457444 3.0E-06 AACGAAAAAAAAGA 14 V_TCFAP2E_04_M02926 TRANSFAC + 135457445 135457458 2.0E-06 AACAACAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 135457446 135457459 8.0E-06 ACAACAAAAAAAAA 14 V_NRSE_B_M00325 TRANSFAC - 135457562 135457582 1.0E-06 GTCAGCACCGTGGACAGCGCC 21 V_NRSE_B_M00325 TRANSFAC - 135457660 135457680 0.0E+00 ATCAGCACCGCGGAGAGCGGC 21 V_AP1_Q6_M00174 TRANSFAC - 135460770 135460780 6.0E-06 AATGACTCAGC 11 V_BACH1_01_M00495 TRANSFAC + 135460768 135460782 8.0E-06 AAGCTGAGTCATTTC 15 V_SOX13_03_M02797 TRANSFAC + 135460841 135460856 4.0E-06 CTTCAAACAATATTTA 16 V_FOXA2_02_M02853 TRANSFAC + 135457442 135457456 5.0E-06 AGAAACAACAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 135457431 135457445 4.0E-06 AACGAAAAAAAAGAA 15 V_ZFP105_03_M02827 TRANSFAC + 135457441 135457455 1.0E-06 AAGAAACAACAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 135457444 135457458 3.0E-06 AAACAACAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 135457445 135457459 1.0E-06 AACAACAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 135460842 135460856 9.0E-06 TTCAAACAATATTTA 15 V_ZFP410_03_M02832 TRANSFAC - 135460020 135460036 3.0E-06 GAAAATGGGATGTGCAG 17 V_CREL_01_M00053 TRANSFAC - 135461702 135461711 6.0E-06 GGGGCTTTCC 10 V_ZBP89_Q4_M01816 TRANSFAC - 135457506 135457515 6.0E-06 TCCTCCCCCC 10 V_AP1_Q6_01_M00925 TRANSFAC - 135460771 135460779 7.0E-06 ATGACTCAG 9 V_FOXK1_04_M02856 TRANSFAC + 135457443 135457457 6.0E-06 GAAACAACAAAAAAA 15 V_IK1_01_M00086 TRANSFAC - 135456690 135456702 1.0E-05 ACTTGGGAAGATC 13 V_IRF3_Q3_M01279 TRANSFAC - 135457469 135457481 2.0E-06 TCACTTTTACTTT 13 V_AP2BETA_Q3_M01858 TRANSFAC - 135460151 135460166 6.0E-06 GCCCGGGCCTGGGGAC 16 V_IRF_Q6_M00772 TRANSFAC - 135457437 135457451 4.0E-06 TGTTGTTTCTTTTTT 15 V_TATA_C_M00216 TRANSFAC - 135457493 135457502 6.0E-06 CCTTTAAAAA 10 V_TATA_C_M00216 TRANSFAC + 135461663 135461672 9.0E-06 ACCATAAAAG 10 V_NKX52_01_M01315 TRANSFAC - 135461796 135461812 1.0E-05 GAAAACACTTAATCGAA 17 V_REST_01_M01256 TRANSFAC + 135457558 135457579 0.0E+00 GGGAGGCGCTGTCCACGGTGCT 22 V_REST_01_M01256 TRANSFAC + 135457656 135457677 1.0E-06 CGCCGCCGCTCTCCGCGGTGCT 22 V_DAX1_01_M01248 TRANSFAC + 135460796 135460815 7.0E-06 ATGGGGGAAGGTCAGCCTCA 20 V_TCF7_03_M02817 TRANSFAC + 135457443 135457459 5.0E-06 GAAACAACAAAAAAAAA 17 V_AP1_C_M00199 TRANSFAC - 135460771 135460779 6.0E-06 ATGACTCAG 9 V_MEF2_Q6_01_M00941 TRANSFAC - 135457409 135457420 8.0E-06 TGTTTTTTTAAG 12 V_ATF3_Q6_M00513 TRANSFAC + 135457338 135457351 7.0E-06 CCGTGACATCACCC 14 V_MAFK_Q3_M02022 TRANSFAC - 135460768 135460778 1.0E-06 TGACTCAGCTT 11 V_ARID3A_04_M02735 TRANSFAC - 135457293 135457309 1.0E-06 CAGTTTGATTAAAAGAG 17 V_ARID3A_04_M02735 TRANSFAC + 135457294 135457310 5.0E-06 TCTTTTAATCAAACTGA 17 V_AP1_01_M00517 TRANSFAC - 135460769 135460781 9.0E-06 AAATGACTCAGCT 13 V_HIC1_02_M01072 TRANSFAC - 135457645 135457659 6.0E-06 GGCGGCTGCCCGCGG 15 V_SOX11_03_M02795 TRANSFAC + 135457443 135457459 1.0E-05 GAAACAACAAAAAAAAA 17 V_BLIMP1_Q6_M01066 TRANSFAC + 135457307 135457322 7.0E-06 CTGAAAGGGAATCGGG 16 V_MAF_Q6_01_M00983 TRANSFAC + 135460769 135460779 1.0E-06 AGCTGAGTCAT 11 V_GATA4_Q3_M00632 TRANSFAC + 135461671 135461682 1.0E-06 AGAAAACAGAGA 12 V_GATA4_Q3_M00632 TRANSFAC + 135461680 135461691 0.0E+00 AGAAAAAAGGGA 12 V_VBP_01_M00228 TRANSFAC + 135461749 135461758 4.0E-06 GTTATATAAT 10 V_AP1_Q4_01_M00926 TRANSFAC + 135460772 135460779 1.0E-05 TGAGTCAT 8 V_MTF1_06_M02882 TRANSFAC + 135457437 135457450 3.0E-06 AAAAAAGAAACAAC 14 V_MTF1_06_M02882 TRANSFAC + 135457444 135457457 4.0E-06 AAACAACAAAAAAA 14 V_NFYC_Q5_M02107 TRANSFAC + 135457365 135457378 0.0E+00 GAGCCAATCAGCGT 14 V_GABPBETA_Q3_M01876 TRANSFAC - 135462274 135462284 5.0E-06 ACAGGAAGGGA 11 V_FAC1_01_M00456 TRANSFAC + 135457411 135457424 9.0E-06 TAAAAAAACACACA 14 V_FAC1_01_M00456 TRANSFAC + 135457420 135457433 7.0E-06 ACACACAACACAAC 14 V_FAC1_01_M00456 TRANSFAC + 135457442 135457455 3.0E-06 AGAAACAACAAAAA 14 V_FAC1_01_M00456 TRANSFAC + 135457445 135457458 3.0E-06 AACAACAAAAAAAA 14 V_CAAT_C_M00200 TRANSFAC - 135461677 135461701 6.0E-06 CCCAACCTACTCCCTTTTTTCTCTG 25 V_HDX_01_M01333 TRANSFAC - 135460033 135460049 8.0E-06 TGGGGGAAATCAAGAAA 17 V_DMRT7_01_M01151 TRANSFAC - 135457436 135457449 2.0E-06 TTGTTTCTTTTTTT 14 V_NFY_01_M00287 TRANSFAC + 135457363 135457378 2.0E-06 CAGAGCCAATCAGCGT 16 V_NKX22_01_M00485 TRANSFAC + 135461801 135461810 2.0E-06 TTAAGTGTTT 10 V_FRA1_Q5_M01267 TRANSFAC + 135460772 135460779 1.0E-05 TGAGTCAT 8 V_NRF2_Q4_M00821 TRANSFAC + 135460768 135460780 1.0E-06 AAGCTGAGTCATT 13 V_NRSF_01_M00256 TRANSFAC - 135457562 135457582 0.0E+00 GTCAGCACCGTGGACAGCGCC 21 V_NRSF_01_M00256 TRANSFAC - 135457660 135457680 0.0E+00 ATCAGCACCGCGGAGAGCGGC 21 V_NRSF_01_M00256 TRANSFAC - 135457729 135457749 1.0E-06 GTCAGCACCGCAGATAGCTGC 21 V_REST_02_M02256 TRANSFAC - 135457660 135457680 0.0E+00 ATCAGCACCGCGGAGAGCGGC 21 V_REST_02_M02256 TRANSFAC - 135457729 135457749 1.0E-06 GTCAGCACCGCAGATAGCTGC 21 V_ETS1_B_M00339 TRANSFAC - 135460772 135460786 6.0E-06 GGAGGAAATGACTCA 15 V_IRF1_Q6_01_M01881 TRANSFAC - 135457436 135457449 8.0E-06 TTGTTTCTTTTTTT 14 V_SRF_06_M02916 TRANSFAC + 135457408 135457424 3.0E-06 CCTTAAAAAAACACACA 17 V_SRF_06_M02916 TRANSFAC + 135457409 135457425 1.0E-06 CTTAAAAAAACACACAC 17 V_SRF_06_M02916 TRANSFAC + 135457430 135457446 7.0E-06 CAACGAAAAAAAAGAAA 17 V_SRF_06_M02916 TRANSFAC + 135457447 135457463 3.0E-06 CAACAAAAAAAAACCCA 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 135457501 135457518 2.0E-06 GGAAGGGGGGGAGGAGAA 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 135462264 135462281 1.0E-06 GGAAGGGAGGAAGCCGAA 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 135462268 135462285 1.0E-06 GACAGGAAGGGAGGAAGC 18 V_NFE2_Q6_M02104 TRANSFAC - 135460765 135460780 3.0E-06 AATGACTCAGCTTGGA 16 V_HLF_01_M00260 TRANSFAC + 135461749 135461758 5.0E-06 GTTATATAAT 10 V_YY1_01_M00059 TRANSFAC + 135457484 135457500 3.0E-06 CAAGTTCATTTTTTAAA 17 V_NFE2_01_M00037 TRANSFAC + 135460769 135460779 1.0E-06 AGCTGAGTCAT 11 V_IRF1_01_M00062 TRANSFAC + 135457473 135457485 5.0E-06 TAAAAGTGACACA 13 V_SRY_05_M02917 TRANSFAC + 135460840 135460856 7.0E-06 TCTTCAAACAATATTTA 17 V_NFE2L2_01_M02263 TRANSFAC - 135460769 135460779 7.0E-06 ATGACTCAGCT 11 V_NFYA_Q5_M02106 TRANSFAC + 135457365 135457378 3.0E-06 GAGCCAATCAGCGT 14 V_TAACC_B_M00331 TRANSFAC + 135457451 135457473 3.0E-06 AAAAAAAAACCCAGACCCAAAGT 23 V_OBOX5_01_M01381 TRANSFAC - 135461749 135461765 1.0E-05 TAAAGCGATTATATAAC 17 V_OBOX6_06_M03067 TRANSFAC + 135461749 135461765 1.0E-05 GTTATATAATCGCTTTA 17 V_PAX4_04_M00380 TRANSFAC + 135457438 135457467 0.0E+00 AAAAAGAAACAACAAAAAAAAACCCAGACC 30 V_DMRT5_01_M01150 TRANSFAC - 135457437 135457451 4.0E-06 TGTTGTTTCTTTTTT 15 V_NANOG_02_M01247 TRANSFAC + 135457441 135457460 3.0E-06 AAGAAACAACAAAAAAAAAC 20

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