Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

NRIP3


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
56675 nuclear receptor interacting protein 3 chr11 -9025096 - 9030596 9025596

Transcription Factor Binding Sites

 
Download all TFBS in the NRIP3 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
TBX20_TBX_full_monomeric_11_1 SELEX + 9023380 9023390 0.0E+00 TAGGTGTGAAA 11
SPIC_ETS_full_monomeric_14_1 SELEX - 9023517 9023530 7.0E-06 GCAAAGAGGAAGGA 14
TBR1_TBX_DBD_monomeric_10_1 SELEX + 9023381 9023390 1.0E-06 AGGTGTGAAA 10
KLF16_C2H2_DBD_monomeric_11_1 SELEX - 9025620 9025630 1.0E-05 GCCCCGCCCCC 11
TBX1_TBX_DBD_dimeric_23_1 SELEX - 9023368 9023390 2.0E-06 TTTCACACCTATAATGTACAAGT 23
TBP_MA0108.2 JASPAR - 9025566 9025580 0.0E+00 CTATAAAAGGCGCGG 15
EWSR1-FLI1_MA0149.1 JASPAR - 9024661 9024678 4.0E-06 GGGAGGAAGCCAGGCTGC 18
IRF5_IRF_full_monomeric_11_1 SELEX + 9025135 9025145 9.0E-06 CACCGAAACCG 11
EOMES_TBX_DBD_monomeric_13_1 SELEX + 9023380 9023392 0.0E+00 TAGGTGTGAAAAC 13
T_MA0009.1 JASPAR + 9023379 9023389 1.0E-06 ATAGGTGTGAA 11
SP1_MA0079.2 JASPAR - 9024693 9024702 7.0E-06 CCCCGCCCCC 10
SP1_MA0079.2 JASPAR - 9025620 9025629 7.0E-06 CCCCGCCCCC 10
TBR1_TBX_full_monomeric_11_1 SELEX + 9023380 9023390 1.0E-06 TAGGTGTGAAA 11
SP4_C2H2_full_monomeric_17_1 SELEX - 9024690 9024706 7.0E-06 CCAGCCCCGCCCCCAAG 17
BCL6B_C2H2_DBD_monomeric_17_1 SELEX - 9023605 9023621 6.0E-06 TGCTGTGTAAGAATTCC 17
TBX21_TBX_full_monomeric_10_1 SELEX + 9023380 9023389 1.0E-06 TAGGTGTGAA 10
TBX2_TBX_full_monomeric_11_1 SELEX + 9023380 9023390 0.0E+00 TAGGTGTGAAA 11
SPDEF_ETS_full_putative-multimer_16_1 SELEX + 9023619 9023634 6.0E-06 GCATGAAGTAGTATAA 16
TBX20_TBX_DBD_monomeric_15_1 SELEX + 9023377 9023391 1.0E-06 TTATAGGTGTGAAAA 15
ELF5_MA0136.1 JASPAR - 9023649 9023657 9.0E-06 AACTTCCTT 9
RUNX3_RUNX_DBD_dimeric_18_1 SELEX + 9025131 9025148 7.0E-06 TCCCCACCGAAACCGCAG 18
V_SP1_Q6_01_M00931 TRANSFAC + 9024694 9024703 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC + 9025621 9025630 4.0E-06 GGGGCGGGGC 10
V_EOMES_03_M02747 TRANSFAC + 9023377 9023393 0.0E+00 TTATAGGTGTGAAAACA 17
V_ZTA_Q2_M00711 TRANSFAC - 9023480 9023492 8.0E-06 TGAGTATGACACA 13
V_TBR2_01_M01774 TRANSFAC + 9023381 9023389 3.0E-06 AGGTGTGAA 9
V_SP1_03_M02281 TRANSFAC - 9024693 9024702 7.0E-06 CCCCGCCCCC 10
V_SP1_03_M02281 TRANSFAC - 9025620 9025629 7.0E-06 CCCCGCCCCC 10
V_TCFAP2E_04_M02926 TRANSFAC + 9024595 9024608 1.0E-06 TGCTAGAAAAAAAG 14
V_GC_01_M00255 TRANSFAC + 9024692 9024705 0.0E+00 TGGGGGCGGGGCTG 14
V_GC_01_M00255 TRANSFAC + 9025619 9025632 5.0E-06 GGGGGGCGGGGCCG 14
V_TATA_01_M00252 TRANSFAC - 9025566 9025580 0.0E+00 CTATAAAAGGCGCGG 15
V_SP1_Q6_M00196 TRANSFAC + 9024692 9024704 1.0E-06 TGGGGGCGGGGCT 13
V_SP1_Q6_M00196 TRANSFAC + 9025619 9025631 0.0E+00 GGGGGGCGGGGCC 13
V_TATA_C_M00216 TRANSFAC - 9025572 9025581 3.0E-06 GCTATAAAAG 10
V_GR_01_M00955 TRANSFAC + 9023339 9023365 1.0E-05 TTTCTGTAACCTGGCTGTTCTGTGCAA 27
V_GRE_C_M00205 TRANSFAC + 9025302 9025317 9.0E-06 GGCTCACCATGTCCTT 16
V_ZIC3_05_M02941 TRANSFAC + 9023612 9023626 0.0E+00 TTACACAGCATGAAG 15
V_SRF_Q5_02_M01007 TRANSFAC + 9025566 9025584 6.0E-06 CCGCGCCTTTTATAGCCGA 19
V_TBX5_01_M01019 TRANSFAC + 9023379 9023390 0.0E+00 ATAGGTGTGAAA 12
V_SRF_03_M01304 TRANSFAC - 9025570 9025582 5.0E-06 GGCTATAAAAGGC 13
V_TFIII_Q6_M00706 TRANSFAC - 9024673 9024681 6.0E-06 AGAGGGAGG 9
V_SP4_Q5_M01273 TRANSFAC - 9024693 9024703 1.0E-06 GCCCCGCCCCC 11
V_SP4_Q5_M01273 TRANSFAC - 9025620 9025630 1.0E-06 GCCCCGCCCCC 11
V_ZIC2_05_M02940 TRANSFAC + 9023612 9023626 1.0E-06 TTACACAGCATGAAG 15
V_PLAG1_01_M01778 TRANSFAC + 9025151 9025166 9.0E-06 GGGGTACTGGAAGGGG 16
V_ZBTB4_04_M02929 TRANSFAC + 9023363 9023378 2.0E-06 CAATCACTTGTACATT 16
V_FPM315_01_M01587 TRANSFAC + 9025079 9025090 6.0E-06 CAGGGAGGAGGC 12
V_ZFP281_01_M01597 TRANSFAC + 9024692 9024702 6.0E-06 TGGGGGCGGGG 11
V_TBX5_Q5_M01044 TRANSFAC - 9023380 9023389 5.0E-06 TTCACACCTA 10
V_EWSR1FLI1_01_M02252 TRANSFAC - 9024661 9024678 4.0E-06 GGGAGGAAGCCAGGCTGC 18
V_NFE2_01_M00037 TRANSFAC - 9025218 9025228 6.0E-06 CACTGAGTCAC 11
V_SP1_Q2_01_M00933 TRANSFAC - 9024693 9024702 4.0E-06 CCCCGCCCCC 10
V_SP1_Q2_01_M00933 TRANSFAC - 9025620 9025629 4.0E-06 CCCCGCCCCC 10
V_ELF5_04_M02241 TRANSFAC - 9023649 9023657 9.0E-06 AACTTCCTT 9
V_SP1_Q4_01_M00932 TRANSFAC + 9024692 9024704 2.0E-06 TGGGGGCGGGGCT 13
V_SP1_Q4_01_M00932 TRANSFAC + 9025619 9025631 1.0E-06 GGGGGGCGGGGCC 13
V_ZIC1_05_M02939 TRANSFAC + 9023612 9023626 1.0E-06 TTACACAGCATGAAG 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL